Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MIR891A-201ENST00000401237 79 ntBASIC1.24□□□□□ -2.21
SHC1P29353 AL161935.2-201ENST00000414627 60 ntBASIC1.24□□□□□ -2.21
SHC1P29353 RPL30P13-201ENST00000418873 348 ntBASIC1.24□□□□□ -2.21
SHC1P29353 AC015922.2-201ENST00000435593 184 ntBASIC1.24□□□□□ -2.21
SHC1P29353 PGBD4P5-201ENST00000445958 426 ntBASIC1.24□□□□□ -2.21
SHC1P29353 RNU7-197P-201ENST00000458836 62 ntBASIC1.24□□□□□ -2.21
SHC1P29353 RNU1-92P-201ENST00000517017 135 ntBASIC1.24□□□□□ -2.21
SHC1P29353 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.24□□□□□ -2.21
SHC1P29353 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.24□□□□□ -2.21
SHC1P29353 snoU13.31-201ENST00000607291 104 ntBASIC1.24□□□□□ -2.21
SHC1P29353 AL513423.1-201ENST00000621695 132 ntBASIC1.24□□□□□ -2.21
SHC1P29353 SNORD3E-202ENST00000627253 216 ntBASIC1.24□□□□□ -2.21
SHC1P29353 MTND1P7-201ENST00000632801 297 ntBASIC1.24□□□□□ -2.21
SHC1P29353 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.24□□□□□ -2.21
SHC1P29353 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SHC1P29353 Y_RNA.251-201ENST00000364551 99 ntBASIC1.23□□□□□ -2.21
SHC1P29353 Y_RNA.547-201ENST00000384654 119 ntBASIC1.23□□□□□ -2.21
SHC1P29353 SNORA20-201ENST00000384662 132 ntBASIC1.23□□□□□ -2.21
SHC1P29353 MIR526A1-201ENST00000384897 85 ntBASIC1.23□□□□□ -2.21
SHC1P29353 MIR569-201ENST00000385228 96 ntBASIC1.23□□□□□ -2.21
SHC1P29353 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.23□□□□□ -2.21
SHC1P29353 MIR1267-201ENST00000408723 78 ntBASIC1.23□□□□□ -2.21
SHC1P29353 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.23□□□□□ -2.21
SHC1P29353 AF228730.3-201ENST00000436691 102 ntBASIC1.23□□□□□ -2.21
SHC1P29353 RPS29P29-201ENST00000456396 171 ntBASIC1.23□□□□□ -2.21
SHC1P29353 RPS29P23-201ENST00000458635 123 ntBASIC1.23□□□□□ -2.21
SHC1P29353 AC092991.1-201ENST00000477176 376 ntBASIC1.23□□□□□ -2.21
SHC1P29353 AC108729.3-201ENST00000513484 108 ntBASIC1.23□□□□□ -2.21
SHC1P29353 AC090142.3-201ENST00000519012 385 ntBASIC1.23□□□□□ -2.21
SHC1P29353 SUMO2P16-201ENST00000519475 264 ntBASIC1.23□□□□□ -2.21
SHC1P29353 AC112693.2-201ENST00000556538 232 ntBASIC1.23□□□□□ -2.21
SHC1P29353 SNORA77B-201ENST00000578179 125 ntBASIC1.23□□□□□ -2.21
SHC1P29353 MIR3646-201ENST00000578301 84 ntBASIC1.23□□□□□ -2.21
SHC1P29353 MIR548X2-201ENST00000579776 100 ntBASIC1.23□□□□□ -2.21
SHC1P29353 MIR3129-201ENST00000581095 76 ntBASIC1.23□□□□□ -2.21
SHC1P29353 MIR376A2-201ENST00000636782 80 ntBASIC1.23□□□□□ -2.21
SHC1P29353 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.23□□□□□ -2.21
SHC1P29353 Y_RNA.488-201ENST00000384403 102 ntBASIC1.22□□□□□ -2.21
SHC1P29353 MIR516B2-201ENST00000385190 85 ntBASIC1.22□□□□□ -2.21
SHC1P29353 MIR802-201ENST00000390235 94 ntBASIC1.22□□□□□ -2.21
SHC1P29353 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
SHC1P29353 SNORD37.2-201ENST00000391075 66 ntBASIC1.22□□□□□ -2.21
SHC1P29353 SNORD77.3-201ENST00000391113 65 ntBASIC1.22□□□□□ -2.21
SHC1P29353 MIR548O-201ENST00000408583 114 ntBASIC1.22□□□□□ -2.21
SHC1P29353 RNU6-955P-201ENST00000410497 104 ntBASIC1.22□□□□□ -2.21
SHC1P29353 RNU6-938P-201ENST00000411285 103 ntBASIC1.22□□□□□ -2.21
SHC1P29353 AC004965.1-201ENST00000413033 213 ntBASIC1.22□□□□□ -2.21
SHC1P29353 AL392103.1-201ENST00000447000 198 ntBASIC1.22□□□□□ -2.21
SHC1P29353 SNORA25.12-201ENST00000516202 82 ntBASIC1.22□□□□□ -2.21
SHC1P29353 RNU6-426P-201ENST00000516464 97 ntBASIC1.22□□□□□ -2.21
SHC1P29353 RNU6-126P-201ENST00000516685 103 ntBASIC1.22□□□□□ -2.21
SHC1P29353 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.22□□□□□ -2.21
SHC1P29353 MIR4421-201ENST00000578133 69 ntBASIC1.22□□□□□ -2.21
SHC1P29353 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.22□□□□□ -2.21
SHC1P29353 AC106754.2-201ENST00000623006 233 ntBASIC1.22□□□□□ -2.21
SHC1P29353 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.22□□□□□ -2.21
SHC1P29353 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
SHC1P29353 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SHC1P29353 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SHC1P29353 SNORA25.7-201ENST00000364375 127 ntBASIC1.21□□□□□ -2.22
SHC1P29353 Y_RNA.497-201ENST00000384447 98 ntBASIC1.21□□□□□ -2.22
SHC1P29353 MIR150-201ENST00000385048 84 ntBASIC1.21□□□□□ -2.22
SHC1P29353 RNU1-78P-201ENST00000391248 165 ntBASIC1.21□□□□□ -2.22
SHC1P29353 JTBP1-201ENST00000441314 247 ntBASIC1.21□□□□□ -2.22
SHC1P29353 RNU1-123P-201ENST00000458950 160 ntBASIC1.21□□□□□ -2.22
SHC1P29353 AC004223.1-201ENST00000479840 271 ntBASIC1.21□□□□□ -2.22
SHC1P29353 RNU4-57P-201ENST00000515980 135 ntBASIC1.21□□□□□ -2.22
SHC1P29353 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
SHC1P29353 AL365205.2-201ENST00000594586 68 ntBASIC1.21□□□□□ -2.22
SHC1P29353 Y_RNA.37-201ENST00000362606 108 ntBASIC1.2□□□□□ -2.22
SHC1P29353 RNU6-199P-201ENST00000362954 107 ntBASIC1.2□□□□□ -2.22
SHC1P29353 Y_RNA.242-201ENST00000364473 110 ntBASIC1.2□□□□□ -2.22
SHC1P29353 Y_RNA.494-201ENST00000384432 111 ntBASIC1.2□□□□□ -2.22
SHC1P29353 Y_RNA.568-201ENST00000384742 113 ntBASIC1.2□□□□□ -2.22
SHC1P29353 MIR613-201ENST00000385248 95 ntBASIC1.2□□□□□ -2.22
SHC1P29353 MIR758-201ENST00000390227 88 ntBASIC1.2□□□□□ -2.22
SHC1P29353 RNU6-460P-201ENST00000391158 108 ntBASIC1.2□□□□□ -2.22
SHC1P29353 SNORA75.5-201ENST00000391291 81 ntBASIC1.2□□□□□ -2.22
SHC1P29353 HMGN2P32-201ENST00000444648 269 ntBASIC1.2□□□□□ -2.22
SHC1P29353 AC245517.4-201ENST00000448601 281 ntBASIC1.2□□□□□ -2.22
SHC1P29353 AC009474.2-201ENST00000451383 136 ntBASIC1.2□□□□□ -2.22
SHC1P29353 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.2□□□□□ -2.22
SHC1P29353 RNA5SP445-201ENST00000515889 115 ntBASIC1.2□□□□□ -2.22
SHC1P29353 RNU6-1053P-201ENST00000515930 101 ntBASIC1.2□□□□□ -2.22
SHC1P29353 RNU6-917P-201ENST00000516294 104 ntBASIC1.2□□□□□ -2.22
SHC1P29353 AC015726.2-201ENST00000620112 122 ntBASIC1.2□□□□□ -2.22
SHC1P29353 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
SHC1P29353 MTND5P32-201ENST00000560711 1802 ntBASIC1.19□□□□□ -2.22
SHC1P29353 AL161722.3-201ENST00000605789 2983 ntBASIC1.19□□□□□ -2.22
SHC1P29353 AL442644.1-201ENST00000454390 3105 ntBASIC1.19□□□□□ -2.22
SHC1P29353 RNU6-1123P-201ENST00000362347 106 ntBASIC1.19□□□□□ -2.22
SHC1P29353 RNU6-508P-201ENST00000363231 103 ntBASIC1.19□□□□□ -2.22
SHC1P29353 SNORA7.1-201ENST00000363750 139 ntBASIC1.19□□□□□ -2.22
SHC1P29353 SNORD115-28-201ENST00000363931 81 ntBASIC1.19□□□□□ -2.22
SHC1P29353 RNU6-704P-201ENST00000364162 103 ntBASIC1.19□□□□□ -2.22
SHC1P29353 SNORD50.2-201ENST00000365465 70 ntBASIC1.19□□□□□ -2.22
SHC1P29353 SNORD38C-201ENST00000384381 69 ntBASIC1.19□□□□□ -2.22
SHC1P29353 RNA5SP127-201ENST00000411051 133 ntBASIC1.19□□□□□ -2.22
SHC1P29353 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.19□□□□□ -2.22
SHC1P29353 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms