Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 RNU6-862P-201ENST00000362804 105 ntBASIC2.08□□□□□ -2.08
KRT4P19013 RNU6-1104P-201ENST00000384723 104 ntBASIC2.08□□□□□ -2.08
KRT4P19013 MIR491-201ENST00000384877 84 ntBASIC2.08□□□□□ -2.08
KRT4P19013 RNU11-3P-201ENST00000391111 133 ntBASIC2.08□□□□□ -2.08
KRT4P19013 SNORA19.1-201ENST00000410656 129 ntBASIC2.08□□□□□ -2.08
KRT4P19013 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.08□□□□□ -2.08
KRT4P19013 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.08□□□□□ -2.08
KRT4P19013 HMGN2P19-201ENST00000425149 265 ntBASIC2.08□□□□□ -2.08
KRT4P19013 RNA5SP57-201ENST00000459463 123 ntBASIC2.08□□□□□ -2.08
KRT4P19013 TRBV12-1-201ENST00000479785 344 ntBASIC2.08□□□□□ -2.08
KRT4P19013 SNORD115-40-201ENST00000606510 82 ntBASIC2.08□□□□□ -2.08
KRT4P19013 AC015726.2-201ENST00000620112 122 ntBASIC2.08□□□□□ -2.08
KRT4P19013 AC091932.4-201ENST00000623386 200 ntBASIC2.08□□□□□ -2.08
KRT4P19013 AL596211.1-201ENST00000569873 2277 ntBASIC2.07□□□□□ -2.08
KRT4P19013 RNU4-36P-201ENST00000364294 144 ntBASIC2.07□□□□□ -2.08
KRT4P19013 RNU6-820P-201ENST00000384273 107 ntBASIC2.07□□□□□ -2.08
KRT4P19013 SNORD38C-201ENST00000384381 69 ntBASIC2.07□□□□□ -2.08
KRT4P19013 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
KRT4P19013 MIR1262-201ENST00000408276 93 ntBASIC2.07□□□□□ -2.08
KRT4P19013 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.07□□□□□ -2.08
KRT4P19013 AC245047.3-201ENST00000429428 127 ntBASIC2.07□□□□□ -2.08
KRT4P19013 RPL23AP6-201ENST00000446637 472 ntBASIC2.07□□□□□ -2.08
KRT4P19013 RPL39P25-201ENST00000449384 154 ntBASIC2.07□□□□□ -2.08
KRT4P19013 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.07□□□□□ -2.08
KRT4P19013 AC022523.2-201ENST00000561045 150 ntBASIC2.07□□□□□ -2.08
KRT4P19013 MIR3935-201ENST00000583472 104 ntBASIC2.07□□□□□ -2.08
KRT4P19013 Y_RNA.107-201ENST00000363190 121 ntBASIC2.06□□□□□ -2.08
KRT4P19013 SNORA63D-201ENST00000364359 132 ntBASIC2.06□□□□□ -2.08
KRT4P19013 SNORA70.4-201ENST00000365509 134 ntBASIC2.06□□□□□ -2.08
KRT4P19013 RNY1P7-201ENST00000384743 110 ntBASIC2.06□□□□□ -2.08
KRT4P19013 MIR450A2-201ENST00000385022 100 ntBASIC2.06□□□□□ -2.08
KRT4P19013 RNU6-816P-201ENST00000390914 107 ntBASIC2.06□□□□□ -2.08
KRT4P19013 RNU6-1268P-201ENST00000391214 107 ntBASIC2.06□□□□□ -2.08
KRT4P19013 RNU6-1239P-201ENST00000391310 107 ntBASIC2.06□□□□□ -2.08
KRT4P19013 SNORA11.4-201ENST00000408823 129 ntBASIC2.06□□□□□ -2.08
KRT4P19013 BX510359.4-201ENST00000423750 193 ntBASIC2.06□□□□□ -2.08
KRT4P19013 AL035398.1-201ENST00000430869 322 ntBASIC2.06□□□□□ -2.08
KRT4P19013 RNU2-35P-201ENST00000516446 142 ntBASIC2.06□□□□□ -2.08
KRT4P19013 AP003327.1-201ENST00000529684 127 ntBASIC2.06□□□□□ -2.08
KRT4P19013 DEFB131E-201ENST00000532329 154 ntBASIC2.06□□□□□ -2.08
KRT4P19013 AC062037.1-201ENST00000605302 128 ntBASIC2.06□□□□□ -2.08
KRT4P19013 MALAT1.1-201ENST00000618249 95 ntBASIC2.06□□□□□ -2.08
KRT4P19013 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
KRT4P19013 RNA5SP493-201ENST00000364115 91 ntBASIC2.05□□□□□ -2.08
KRT4P19013 RNA5SP233-201ENST00000459153 113 ntBASIC2.05□□□□□ -2.08
KRT4P19013 AC107297.1-201ENST00000459991 176 ntBASIC2.05□□□□□ -2.08
KRT4P19013 RNU7-6P-201ENST00000516845 62 ntBASIC2.05□□□□□ -2.08
KRT4P19013 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.05□□□□□ -2.08
KRT4P19013 AC012493.3-201ENST00000604494 112 ntBASIC2.05□□□□□ -2.08
KRT4P19013 AC005000.2-201ENST00000605468 310 ntBASIC2.05□□□□□ -2.08
KRT4P19013 SNORA28-201ENST00000606769 126 ntBASIC2.05□□□□□ -2.08
KRT4P19013 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.05□□□□□ -2.08
KRT4P19013 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
KRT4P19013 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRT4P19013 RNA5SP289-201ENST00000362332 137 ntBASIC2.04□□□□□ -2.08
KRT4P19013 Y_RNA.10-201ENST00000362371 110 ntBASIC2.04□□□□□ -2.08
KRT4P19013 MIR597-201ENST00000384968 97 ntBASIC2.04□□□□□ -2.08
KRT4P19013 SNORA11.1-201ENST00000408133 129 ntBASIC2.04□□□□□ -2.08
KRT4P19013 HMGN2P3-201ENST00000433603 273 ntBASIC2.04□□□□□ -2.08
KRT4P19013 HMGN2P5-201ENST00000436882 273 ntBASIC2.04□□□□□ -2.08
KRT4P19013 AL049873.1-201ENST00000480540 376 ntBASIC2.04□□□□□ -2.08
KRT4P19013 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.04□□□□□ -2.08
KRT4P19013 SCARNA23-201ENST00000516060 130 ntBASIC2.04□□□□□ -2.08
KRT4P19013 RN7SKP12-201ENST00000516275 143 ntBASIC2.04□□□□□ -2.08
KRT4P19013 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.04□□□□□ -2.08
KRT4P19013 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
KRT4P19013 MIR4299-201ENST00000577899 72 ntBASIC2.04□□□□□ -2.08
KRT4P19013 FAM71BP1-201ENST00000604431 523 ntBASIC2.04□□□□□ -2.08
KRT4P19013 AC027279.3-201ENST00000625055 122 ntBASIC2.04□□□□□ -2.08
KRT4P19013 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
KRT4P19013 SNORA5B-201ENST00000363786 132 ntBASIC2.03□□□□□ -2.08
KRT4P19013 RNA5SP173-201ENST00000364857 136 ntBASIC2.03□□□□□ -2.08
KRT4P19013 Y_RNA.466-201ENST00000384294 113 ntBASIC2.03□□□□□ -2.08
KRT4P19013 SNORA27-201ENST00000384323 126 ntBASIC2.03□□□□□ -2.08
KRT4P19013 Y_RNA.507-201ENST00000384500 99 ntBASIC2.03□□□□□ -2.08
KRT4P19013 RNA5SP465-201ENST00000391195 109 ntBASIC2.03□□□□□ -2.08
KRT4P19013 SUMO2P12-201ENST00000405924 140 ntBASIC2.03□□□□□ -2.08
KRT4P19013 RN7SKP200-201ENST00000410564 320 ntBASIC2.03□□□□□ -2.08
KRT4P19013 RPL23AP83-201ENST00000434984 473 ntBASIC2.03□□□□□ -2.08
KRT4P19013 AL606517.2-201ENST00000442855 241 ntBASIC2.03□□□□□ -2.08
KRT4P19013 RNU7-96P-201ENST00000459535 64 ntBASIC2.03□□□□□ -2.08
KRT4P19013 AC114811.1-201ENST00000507207 168 ntBASIC2.03□□□□□ -2.08
KRT4P19013 MIR3169-201ENST00000578032 83 ntBASIC2.03□□□□□ -2.08
KRT4P19013 AL627230.6-201ENST00000611129 280 ntBASIC2.03□□□□□ -2.08
KRT4P19013 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRT4P19013 AL442644.1-201ENST00000454390 3105 ntBASIC2.02□□□□□ -2.09
KRT4P19013 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRT4P19013 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.02□□□□□ -2.09
KRT4P19013 MIR342-201ENST00000362212 99 ntBASIC2.02□□□□□ -2.09
KRT4P19013 RNU6-661P-201ENST00000362409 107 ntBASIC2.02□□□□□ -2.09
KRT4P19013 SNORD115-34-201ENST00000362441 82 ntBASIC2.02□□□□□ -2.09
KRT4P19013 SNORD115-12-201ENST00000362583 82 ntBASIC2.02□□□□□ -2.09
KRT4P19013 SNORD115-29-201ENST00000362834 82 ntBASIC2.02□□□□□ -2.09
KRT4P19013 SNORD115-9-201ENST00000362912 82 ntBASIC2.02□□□□□ -2.09
KRT4P19013 RNY3P2-201ENST00000362918 102 ntBASIC2.02□□□□□ -2.09
KRT4P19013 SNORD115-21-201ENST00000362963 81 ntBASIC2.02□□□□□ -2.09
KRT4P19013 SNORD115-14-201ENST00000363090 81 ntBASIC2.02□□□□□ -2.09
KRT4P19013 RNU6-23P-201ENST00000363283 107 ntBASIC2.02□□□□□ -2.09
KRT4P19013 SNORD115-13-201ENST00000363358 82 ntBASIC2.02□□□□□ -2.09
KRT4P19013 SNORD115-41-201ENST00000363608 82 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms