Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC007336.1-201ENST00000576365 3828 ntBASIC2.78□□□□□ -1.96
NID1P14543 RNU6-1163P-201ENST00000364516 107 ntBASIC2.78□□□□□ -1.96
NID1P14543 SNORA44-201ENST00000384584 132 ntBASIC2.78□□□□□ -1.96
NID1P14543 MIR889-201ENST00000401280 79 ntBASIC2.78□□□□□ -1.96
NID1P14543 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.78□□□□□ -1.96
NID1P14543 RN7SKP220-201ENST00000410611 288 ntBASIC2.78□□□□□ -1.96
NID1P14543 AL445685.2-201ENST00000422551 342 ntBASIC2.78□□□□□ -1.96
NID1P14543 UBL5P1-201ENST00000507979 193 ntBASIC2.78□□□□□ -1.96
NID1P14543 RNA5SP380-201ENST00000517190 98 ntBASIC2.78□□□□□ -1.96
NID1P14543 SNORD3E-202ENST00000627253 216 ntBASIC2.78□□□□□ -1.96
NID1P14543 MIR22-201ENST00000362190 85 ntBASIC2.77□□□□□ -1.97
NID1P14543 Y_RNA.94-201ENST00000363068 106 ntBASIC2.77□□□□□ -1.97
NID1P14543 U8.16-201ENST00000391279 133 ntBASIC2.77□□□□□ -1.97
NID1P14543 AL034345.1-201ENST00000407768 123 ntBASIC2.77□□□□□ -1.97
NID1P14543 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.77□□□□□ -1.97
NID1P14543 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.77□□□□□ -1.97
NID1P14543 RN7SL429P-201ENST00000479090 223 ntBASIC2.77□□□□□ -1.97
NID1P14543 RN7SL489P-201ENST00000486185 223 ntBASIC2.77□□□□□ -1.97
NID1P14543 RN7SL327P-201ENST00000488659 223 ntBASIC2.77□□□□□ -1.97
NID1P14543 AC008885.1-201ENST00000514930 301 ntBASIC2.77□□□□□ -1.97
NID1P14543 SNORA31.10-201ENST00000516482 106 ntBASIC2.77□□□□□ -1.97
NID1P14543 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.77□□□□□ -1.97
NID1P14543 AC006023.1-201ENST00000603944 259 ntBASIC2.77□□□□□ -1.97
NID1P14543 AC069114.2-201ENST00000604699 304 ntBASIC2.77□□□□□ -1.97
NID1P14543 RN7SL853P-201ENST00000617250 223 ntBASIC2.77□□□□□ -1.97
NID1P14543 AC007318.2-201ENST00000620999 243 ntBASIC2.77□□□□□ -1.97
NID1P14543 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
NID1P14543 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NID1P14543 AC009487.2-201ENST00000420969 6821 ntBASIC2.77□□□□□ -1.97
NID1P14543 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
NID1P14543 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
NID1P14543 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
NID1P14543 SNORA24-201ENST00000384096 131 ntBASIC2.76□□□□□ -1.97
NID1P14543 RNU6-301P-201ENST00000384277 107 ntBASIC2.76□□□□□ -1.97
NID1P14543 MIR452-201ENST00000385020 85 ntBASIC2.76□□□□□ -1.97
NID1P14543 MIR516B2-201ENST00000385190 85 ntBASIC2.76□□□□□ -1.97
NID1P14543 RNU6-1190P-201ENST00000410811 104 ntBASIC2.76□□□□□ -1.97
NID1P14543 RPS29P28-201ENST00000446439 141 ntBASIC2.76□□□□□ -1.97
NID1P14543 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.76□□□□□ -1.97
NID1P14543 RNU7-12P-201ENST00000516030 62 ntBASIC2.76□□□□□ -1.97
NID1P14543 AL020996.3-201ENST00000606617 222 ntBASIC2.76□□□□□ -1.97
NID1P14543 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
NID1P14543 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
NID1P14543 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.75□□□□□ -1.97
NID1P14543 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
NID1P14543 RNU6-1019P-201ENST00000364424 107 ntBASIC2.75□□□□□ -1.97
NID1P14543 RNA5SP126-201ENST00000365092 109 ntBASIC2.75□□□□□ -1.97
NID1P14543 RNU7-73P-201ENST00000458743 63 ntBASIC2.75□□□□□ -1.97
NID1P14543 RNA5SP168-201ENST00000516642 112 ntBASIC2.75□□□□□ -1.97
NID1P14543 AC005786.1-201ENST00000588553 154 ntBASIC2.75□□□□□ -1.97
NID1P14543 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.75□□□□□ -1.97
NID1P14543 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NID1P14543 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
NID1P14543 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.74□□□□□ -1.97
NID1P14543 RNU6-457P-201ENST00000363999 107 ntBASIC2.74□□□□□ -1.97
NID1P14543 RNU6-950P-201ENST00000384651 107 ntBASIC2.74□□□□□ -1.97
NID1P14543 MIR206-201ENST00000384872 86 ntBASIC2.74□□□□□ -1.97
NID1P14543 MIR136-201ENST00000385207 82 ntBASIC2.74□□□□□ -1.97
NID1P14543 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
NID1P14543 AC104332.2-201ENST00000429959 156 ntBASIC2.74□□□□□ -1.97
NID1P14543 AP004217.1-201ENST00000480579 346 ntBASIC2.74□□□□□ -1.97
NID1P14543 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.74□□□□□ -1.97
NID1P14543 MIR4672-201ENST00000583126 81 ntBASIC2.74□□□□□ -1.97
NID1P14543 MIR4712-201ENST00000583750 82 ntBASIC2.74□□□□□ -1.97
NID1P14543 MIR3616-201ENST00000584070 92 ntBASIC2.74□□□□□ -1.97
NID1P14543 SEPT14P17-201ENST00000617978 177 ntBASIC2.74□□□□□ -1.97
NID1P14543 AC022513.1-201ENST00000624512 117 ntBASIC2.74□□□□□ -1.97
NID1P14543 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.74□□□□□ -1.97
NID1P14543 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NID1P14543 MIR449A-201ENST00000362113 91 ntBASIC2.73□□□□□ -1.97
NID1P14543 RNU6-1244P-201ENST00000363614 108 ntBASIC2.73□□□□□ -1.97
NID1P14543 SNORD21-201ENST00000383953 95 ntBASIC2.73□□□□□ -1.97
NID1P14543 RNU6-913P-201ENST00000390913 95 ntBASIC2.73□□□□□ -1.97
NID1P14543 AL161932.1-201ENST00000437408 146 ntBASIC2.73□□□□□ -1.97
NID1P14543 HSPE1P9-201ENST00000440046 311 ntBASIC2.73□□□□□ -1.97
NID1P14543 RNA5SP385-201ENST00000515947 110 ntBASIC2.73□□□□□ -1.97
NID1P14543 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.73□□□□□ -1.97
NID1P14543 U4atac.1-201ENST00000618345 95 ntBASIC2.73□□□□□ -1.97
NID1P14543 AC243994.1-201ENST00000618627 109 ntBASIC2.73□□□□□ -1.97
NID1P14543 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.73□□□□□ -1.97
NID1P14543 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.73□□□□□ -1.97
NID1P14543 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.72□□□□□ -1.97
NID1P14543 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.72□□□□□ -1.97
NID1P14543 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NID1P14543 SNORD115-27-201ENST00000364430 82 ntBASIC2.72□□□□□ -1.97
NID1P14543 SNORA71.1-201ENST00000364523 117 ntBASIC2.72□□□□□ -1.97
NID1P14543 Y_RNA.567-201ENST00000384736 106 ntBASIC2.72□□□□□ -1.97
NID1P14543 MIR34C-201ENST00000384831 77 ntBASIC2.72□□□□□ -1.97
NID1P14543 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.72□□□□□ -1.97
NID1P14543 RNU6-826P-201ENST00000516827 104 ntBASIC2.72□□□□□ -1.97
NID1P14543 AC026271.5-201ENST00000577873 130 ntBASIC2.72□□□□□ -1.97
NID1P14543 MIR4506-201ENST00000584693 77 ntBASIC2.72□□□□□ -1.97
NID1P14543 RPL12P50-201ENST00000603116 116 ntBASIC2.72□□□□□ -1.97
NID1P14543 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NID1P14543 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
NID1P14543 AC005336.3-201ENST00000623833 2679 ntBASIC2.72□□□□□ -1.97
NID1P14543 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.71□□□□□ -1.98
NID1P14543 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
NID1P14543 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.71□□□□□ -1.98
NID1P14543 AP000648.3-201ENST00000623539 4507 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms