Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-2.85□□□□□ -2.87
VCANP13611 RNU6-572P-201ENST00000516724 80 ntBASIC-2.85□□□□□ -2.87
VCANP13611 AC022878.1-201ENST00000530684 149 ntBASIC-2.85□□□□□ -2.87
VCANP13611 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-2.85□□□□□ -2.87
VCANP13611 RNU6-1240P-201ENST00000365155 104 ntBASIC-2.86□□□□□ -2.87
VCANP13611 RNU1-115P-201ENST00000365329 160 ntBASIC-2.86□□□□□ -2.87
VCANP13611 RNU6-98P-201ENST00000384173 107 ntBASIC-2.86□□□□□ -2.87
VCANP13611 MIR1303-201ENST00000408625 86 ntBASIC-2.86□□□□□ -2.87
VCANP13611 AF250324.2-201ENST00000608299 610 ntBASIC-2.86□□□□□ -2.87
VCANP13611 RNU6-449P-201ENST00000383914 107 ntBASIC-2.86□□□□□ -2.87
VCANP13611 MIR519E-201ENST00000385075 84 ntBASIC-2.86□□□□□ -2.87
VCANP13611 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-2.86□□□□□ -2.87
VCANP13611 SNORD98-201ENST00000636377 67 ntBASIC-2.86□□□□□ -2.87
VCANP13611 U6.97-201ENST00000636904 101 ntBASIC-2.86□□□□□ -2.87
VCANP13611 RNU6-839P-201ENST00000363347 108 ntBASIC-2.87□□□□□ -2.87
VCANP13611 RNU4-75P-201ENST00000364621 146 ntBASIC-2.87□□□□□ -2.87
VCANP13611 RNU6-1208P-201ENST00000459588 107 ntBASIC-2.87□□□□□ -2.87
VCANP13611 AC026414.1-201ENST00000504046 698 ntBASIC-2.87□□□□□ -2.87
VCANP13611 snoZ196.1-201ENST00000625269 89 ntBASIC-2.87□□□□□ -2.87
VCANP13611 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-2.87□□□□□ -2.87
VCANP13611 SCARNA24.2-201ENST00000516968 130 ntBASIC-2.87□□□□□ -2.87
VCANP13611 AC026585.1-201ENST00000619582 524 ntBASIC-2.87□□□□□ -2.87
VCANP13611 RNU6-1084P-201ENST00000362498 107 ntBASIC-2.87□□□□□ -2.87
VCANP13611 MIR548E-201ENST00000408287 88 ntBASIC-2.87□□□□□ -2.87
VCANP13611 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-2.87□□□□□ -2.87
VCANP13611 RNU6-834P-201ENST00000362367 110 ntBASIC-2.88□□□□□ -2.87
VCANP13611 Y_RNA.517-201ENST00000384551 106 ntBASIC-2.88□□□□□ -2.87
VCANP13611 RNA5SP201-201ENST00000410316 124 ntBASIC-2.88□□□□□ -2.87
VCANP13611 SNORD56.1-201ENST00000362913 68 ntBASIC-2.88□□□□□ -2.87
VCANP13611 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.88□□□□□ -2.87
VCANP13611 SNORD114-4-201ENST00000363962 75 ntBASIC-2.88□□□□□ -2.87
VCANP13611 RNU4-17P-201ENST00000365598 141 ntBASIC-2.88□□□□□ -2.87
VCANP13611 RNU6-921P-201ENST00000384361 107 ntBASIC-2.88□□□□□ -2.87
VCANP13611 Y_RNA.504-201ENST00000384481 104 ntBASIC-2.88□□□□□ -2.87
VCANP13611 RNU6-630P-201ENST00000391258 106 ntBASIC-2.88□□□□□ -2.87
VCANP13611 MIR548Q-201ENST00000408404 100 ntBASIC-2.88□□□□□ -2.87
VCANP13611 PIGPP4-201ENST00000584447 307 ntBASIC-2.88□□□□□ -2.87
VCANP13611 RNU6-1214P-201ENST00000363650 109 ntBASIC-2.89□□□□□ -2.87
VCANP13611 RNU6-1281P-201ENST00000516223 105 ntBASIC-2.89□□□□□ -2.87
VCANP13611 MIR3646-201ENST00000578301 84 ntBASIC-2.89□□□□□ -2.87
VCANP13611 RNU6-20P-201ENST00000384106 107 ntBASIC-2.89□□□□□ -2.87
VCANP13611 RNU2-29P-201ENST00000410423 189 ntBASIC-2.89□□□□□ -2.87
VCANP13611 RNU6-912P-201ENST00000363800 104 ntBASIC-2.89□□□□□ -2.87
VCANP13611 MIR626-201ENST00000385032 94 ntBASIC-2.89□□□□□ -2.87
VCANP13611 RNU4-22P-201ENST00000411058 166 ntBASIC-2.89□□□□□ -2.87
VCANP13611 USP9YP30-201ENST00000430729 455 ntBASIC-2.89□□□□□ -2.87
VCANP13611 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-2.89□□□□□ -2.87
VCANP13611 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-2.9□□□□□ -2.87
VCANP13611 RNU6-1012P-201ENST00000516606 109 ntBASIC-2.9□□□□□ -2.87
VCANP13611 RNU6-767P-201ENST00000384132 107 ntBASIC-2.9□□□□□ -2.87
VCANP13611 VN1R10P-201ENST00000447106 875 ntBASIC-2.9□□□□□ -2.87
VCANP13611 MIR548AG2-201ENST00000581228 64 ntBASIC-2.9□□□□□ -2.87
VCANP13611 SNORD115-7-201ENST00000365306 82 ntBASIC-2.91□□□□□ -2.87
VCANP13611 Y_RNA.467-201ENST00000384297 102 ntBASIC-2.91□□□□□ -2.87
VCANP13611 SNORD12C-201ENST00000386307 89 ntBASIC-2.91□□□□□ -2.87
VCANP13611 RNU6-416P-201ENST00000516265 103 ntBASIC-2.91□□□□□ -2.87
VCANP13611 SNORA31.19-201ENST00000517079 126 ntBASIC-2.91□□□□□ -2.87
VCANP13611 MIR4438-201ENST00000585271 93 ntBASIC-2.91□□□□□ -2.87
VCANP13611 FGF7P2-201ENST00000332473 296 ntBASIC-2.91□□□□□ -2.88
VCANP13611 MIR544A-201ENST00000384855 91 ntBASIC-2.91□□□□□ -2.88
VCANP13611 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-2.91□□□□□ -2.88
VCANP13611 AC139453.2-201ENST00000487255 133 ntBASIC-2.91□□□□□ -2.88
VCANP13611 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.91□□□□□ -2.88
VCANP13611 AC087883.1-201ENST00000551882 391 ntBASIC-2.91□□□□□ -2.88
VCANP13611 AL450270.1-201ENST00000606160 391 ntBASIC-2.91□□□□□ -2.88
VCANP13611 AC096949.1-201ENST00000412047 152 ntBASIC-2.91□□□□□ -2.88
VCANP13611 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-2.91□□□□□ -2.88
VCANP13611 AC010975.2-201ENST00000427781 588 ntBASIC-2.91□□□□□ -2.88
VCANP13611 RNU7-57P-201ENST00000459540 60 ntBASIC-2.91□□□□□ -2.88
VCANP13611 RNY1P1-201ENST00000364372 112 ntBASIC-2.92□□□□□ -2.88
VCANP13611 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.92□□□□□ -2.88
VCANP13611 RNY1P16-201ENST00000363063 111 ntBASIC-2.92□□□□□ -2.88
VCANP13611 SNORA75B-201ENST00000384053 137 ntBASIC-2.92□□□□□ -2.88
VCANP13611 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.92□□□□□ -2.88
VCANP13611 CYCSP46-201ENST00000423569 204 ntBASIC-2.92□□□□□ -2.88
VCANP13611 MIR548AC-201ENST00000585049 88 ntBASIC-2.92□□□□□ -2.88
VCANP13611 AC013734.1-201ENST00000619329 111 ntBASIC-2.92□□□□□ -2.88
VCANP13611 MIR379-201ENST00000362218 67 ntBASIC-2.92□□□□□ -2.88
VCANP13611 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.92□□□□□ -2.88
VCANP13611 AC104629.1-201ENST00000494226 508 ntBASIC-2.92□□□□□ -2.88
VCANP13611 RNU6-781P-201ENST00000516377 101 ntBASIC-2.92□□□□□ -2.88
VCANP13611 SNORA43.2-201ENST00000516652 128 ntBASIC-2.92□□□□□ -2.88
VCANP13611 AL118558.2-201ENST00000556294 238 ntBASIC-2.92□□□□□ -2.88
VCANP13611 SNORD18C-201ENST00000362704 69 ntBASIC-2.93□□□□□ -2.88
VCANP13611 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.93□□□□□ -2.88
VCANP13611 MIR3920-201ENST00000581751 86 ntBASIC-2.93□□□□□ -2.88
VCANP13611 AL121757.2-201ENST00000611223 313 ntBASIC-2.93□□□□□ -2.88
VCANP13611 RNU6-831P-201ENST00000384548 107 ntBASIC-2.93□□□□□ -2.88
VCANP13611 MTND1P21-201ENST00000412991 285 ntBASIC-2.93□□□□□ -2.88
VCANP13611 AC090616.2-202ENST00000584248 222 ntBASIC-2.93□□□□□ -2.88
VCANP13611 AC091948.2-201ENST00000636510 279 ntBASIC-2.93□□□□□ -2.88
VCANP13611 RNU6-847P-201ENST00000411115 108 ntBASIC-2.94□□□□□ -2.88
VCANP13611 RNU6-602P-201ENST00000411155 105 ntBASIC-2.94□□□□□ -2.88
VCANP13611 AC092608.3-201ENST00000625017 386 ntBASIC-2.94□□□□□ -2.88
VCANP13611 RNU6-341P-201ENST00000516973 96 ntBASIC-2.94□□□□□ -2.88
VCANP13611 MIR548H5-201ENST00000580314 60 ntBASIC-2.94□□□□□ -2.88
VCANP13611 AC091178.2-201ENST00000584401 117 ntBASIC-2.94□□□□□ -2.88
VCANP13611 SNORD38C-201ENST00000384381 69 ntBASIC-2.95□□□□□ -2.88
VCANP13611 EEF1E1P1-201ENST00000446998 430 ntBASIC-2.95□□□□□ -2.88
VCANP13611 RNU6-998P-201ENST00000515894 101 ntBASIC-2.95□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 215.7 ms