Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 RNU2-55P-201ENST00000411146 174 ntBASIC1.13□□□□□ -2.23
HOXD4P09016 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.13□□□□□ -2.23
HOXD4P09016 RNU6-1219P-201ENST00000516143 112 ntBASIC1.13□□□□□ -2.23
HOXD4P09016 Y_RNA.666-201ENST00000516187 112 ntBASIC1.13□□□□□ -2.23
HOXD4P09016 RNU6-1299P-201ENST00000516316 100 ntBASIC1.13□□□□□ -2.23
HOXD4P09016 Y_RNA.700-201ENST00000516806 100 ntBASIC1.13□□□□□ -2.23
HOXD4P09016 SNORA81.3-201ENST00000517283 198 ntBASIC1.13□□□□□ -2.23
HOXD4P09016 AP002392.1-201ENST00000537692 208 ntBASIC1.13□□□□□ -2.23
HOXD4P09016 FAM106DP-201ENST00000586416 501 ntBASIC1.13□□□□□ -2.23
HOXD4P09016 U6.106-201ENST00000636360 105 ntBASIC1.13□□□□□ -2.23
HOXD4P09016 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HOXD4P09016 AL442644.1-201ENST00000454390 3105 ntBASIC1.12□□□□□ -2.23
HOXD4P09016 Y_RNA.75-201ENST00000362927 97 ntBASIC1.12□□□□□ -2.23
HOXD4P09016 Y_RNA.242-201ENST00000364473 110 ntBASIC1.12□□□□□ -2.23
HOXD4P09016 Y_RNA.634-201ENST00000364811 113 ntBASIC1.12□□□□□ -2.23
HOXD4P09016 SNORA2.2-201ENST00000365473 135 ntBASIC1.12□□□□□ -2.23
HOXD4P09016 Y_RNA.785-201ENST00000384290 109 ntBASIC1.12□□□□□ -2.23
HOXD4P09016 MIR15B-201ENST00000385045 98 ntBASIC1.12□□□□□ -2.23
HOXD4P09016 MIR653-201ENST00000385279 96 ntBASIC1.12□□□□□ -2.23
HOXD4P09016 SNORD41-201ENST00000386967 70 ntBASIC1.12□□□□□ -2.23
HOXD4P09016 RNU2-70P-201ENST00000410718 179 ntBASIC1.12□□□□□ -2.23
HOXD4P09016 SNX2P2-201ENST00000424553 323 ntBASIC1.12□□□□□ -2.23
HOXD4P09016 AL121914.1-201ENST00000450188 156 ntBASIC1.12□□□□□ -2.23
HOXD4P09016 RNU7-25P-201ENST00000516544 62 ntBASIC1.12□□□□□ -2.23
HOXD4P09016 RNU6-922P-201ENST00000516753 99 ntBASIC1.12□□□□□ -2.23
HOXD4P09016 AC090049.2-201ENST00000550377 109 ntBASIC1.12□□□□□ -2.23
HOXD4P09016 AC072026.1-201ENST00000605023 201 ntBASIC1.12□□□□□ -2.23
HOXD4P09016 AC015726.2-201ENST00000620112 122 ntBASIC1.12□□□□□ -2.23
HOXD4P09016 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HOXD4P09016 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
HOXD4P09016 MIR26B-201ENST00000362251 77 ntBASIC1.11□□□□□ -2.23
HOXD4P09016 Y_RNA.66-201ENST00000362862 102 ntBASIC1.11□□□□□ -2.23
HOXD4P09016 SNORD38C-201ENST00000384381 69 ntBASIC1.11□□□□□ -2.23
HOXD4P09016 Y_RNA.540-201ENST00000384638 111 ntBASIC1.11□□□□□ -2.23
HOXD4P09016 MIR136-201ENST00000385207 82 ntBASIC1.11□□□□□ -2.23
HOXD4P09016 MIR613-201ENST00000385248 95 ntBASIC1.11□□□□□ -2.23
HOXD4P09016 MIR548O-201ENST00000408583 114 ntBASIC1.11□□□□□ -2.23
HOXD4P09016 RNU4-43P-201ENST00000410628 137 ntBASIC1.11□□□□□ -2.23
HOXD4P09016 RNU7-120P-201ENST00000459334 63 ntBASIC1.11□□□□□ -2.23
HOXD4P09016 RNU6-197P-201ENST00000516680 100 ntBASIC1.11□□□□□ -2.23
HOXD4P09016 AC097639.2-201ENST00000603159 172 ntBASIC1.11□□□□□ -2.23
HOXD4P09016 AC004792.1-201ENST00000614523 137 ntBASIC1.11□□□□□ -2.23
HOXD4P09016 MIR548A2-201ENST00000384956 97 ntBASIC1.1□□□□□ -2.23
HOXD4P09016 AL451046.2-201ENST00000403074 277 ntBASIC1.1□□□□□ -2.23
HOXD4P09016 RNA5SP153-201ENST00000516498 76 ntBASIC1.1□□□□□ -2.23
HOXD4P09016 RNU6-126P-201ENST00000516685 103 ntBASIC1.1□□□□□ -2.23
HOXD4P09016 RNU6-861P-201ENST00000516745 106 ntBASIC1.1□□□□□ -2.23
HOXD4P09016 SNORA18.7-201ENST00000516910 131 ntBASIC1.1□□□□□ -2.23
HOXD4P09016 RNU6-365P-201ENST00000517113 106 ntBASIC1.1□□□□□ -2.23
HOXD4P09016 RNU6-1270P-201ENST00000517128 108 ntBASIC1.1□□□□□ -2.23
HOXD4P09016 AC007751.1-201ENST00000529260 376 ntBASIC1.1□□□□□ -2.23
HOXD4P09016 MRPS18CP4-201ENST00000535821 231 ntBASIC1.1□□□□□ -2.23
HOXD4P09016 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.1□□□□□ -2.23
HOXD4P09016 RNU6-682P-201ENST00000363843 106 ntBASIC1.09□□□□□ -2.23
HOXD4P09016 SNORD24-201ENST00000383884 75 ntBASIC1.09□□□□□ -2.23
HOXD4P09016 SNORD61-201ENST00000384252 73 ntBASIC1.09□□□□□ -2.23
HOXD4P09016 Y_RNA.547-201ENST00000384654 119 ntBASIC1.09□□□□□ -2.23
HOXD4P09016 MIR518F-201ENST00000384973 87 ntBASIC1.09□□□□□ -2.23
HOXD4P09016 SNORA26-201ENST00000391286 122 ntBASIC1.09□□□□□ -2.23
HOXD4P09016 RNU6-322P-201ENST00000516010 103 ntBASIC1.09□□□□□ -2.23
HOXD4P09016 RNU6-830P-201ENST00000516353 107 ntBASIC1.09□□□□□ -2.23
HOXD4P09016 AC090821.2-201ENST00000523552 176 ntBASIC1.09□□□□□ -2.23
HOXD4P09016 AL513534.2-201ENST00000603836 250 ntBASIC1.09□□□□□ -2.23
HOXD4P09016 AC022709.1-201ENST00000615967 87 ntBASIC1.09□□□□□ -2.23
HOXD4P09016 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.08□□□□□ -2.24
HOXD4P09016 Y_RNA.23-201ENST00000362496 106 ntBASIC1.08□□□□□ -2.24
HOXD4P09016 RNU6-888P-201ENST00000363010 101 ntBASIC1.08□□□□□ -2.24
HOXD4P09016 RNU6-643P-201ENST00000384018 107 ntBASIC1.08□□□□□ -2.24
HOXD4P09016 MIR520E-201ENST00000384867 87 ntBASIC1.08□□□□□ -2.24
HOXD4P09016 MIR7-2-201ENST00000384970 110 ntBASIC1.08□□□□□ -2.24
HOXD4P09016 SNORA79-201ENST00000408376 140 ntBASIC1.08□□□□□ -2.24
HOXD4P09016 RNU2-64P-201ENST00000411315 191 ntBASIC1.08□□□□□ -2.24
HOXD4P09016 SNORD123-201ENST00000459473 70 ntBASIC1.08□□□□□ -2.24
HOXD4P09016 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.08□□□□□ -2.24
HOXD4P09016 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.08□□□□□ -2.24
HOXD4P09016 RNU4-57P-201ENST00000515980 135 ntBASIC1.08□□□□□ -2.24
HOXD4P09016 RNU6-693P-201ENST00000516134 107 ntBASIC1.08□□□□□ -2.24
HOXD4P09016 RNU6-504P-201ENST00000516568 104 ntBASIC1.08□□□□□ -2.24
HOXD4P09016 SNORA74.3-201ENST00000517108 154 ntBASIC1.08□□□□□ -2.24
HOXD4P09016 AL512310.8-201ENST00000550183 120 ntBASIC1.08□□□□□ -2.24
HOXD4P09016 MIR3668-201ENST00000582138 75 ntBASIC1.08□□□□□ -2.24
HOXD4P09016 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HOXD4P09016 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
HOXD4P09016 Y_RNA.240-201ENST00000364469 95 ntBASIC1.07□□□□□ -2.24
HOXD4P09016 RNU6-907P-201ENST00000390924 102 ntBASIC1.07□□□□□ -2.24
HOXD4P09016 SNORD28B-201ENST00000390993 75 ntBASIC1.07□□□□□ -2.24
HOXD4P09016 RNU5E-9P-201ENST00000411164 104 ntBASIC1.07□□□□□ -2.24
HOXD4P09016 MRPL35P3-201ENST00000421557 364 ntBASIC1.07□□□□□ -2.24
HOXD4P09016 SEPT7P4-201ENST00000437076 306 ntBASIC1.07□□□□□ -2.24
HOXD4P09016 RPS29P29-201ENST00000456396 171 ntBASIC1.07□□□□□ -2.24
HOXD4P09016 AC074198.2-201ENST00000508153 258 ntBASIC1.07□□□□□ -2.24
HOXD4P09016 SNORD111.1-201ENST00000516421 86 ntBASIC1.07□□□□□ -2.24
HOXD4P09016 RNU6-182P-201ENST00000516970 105 ntBASIC1.07□□□□□ -2.24
HOXD4P09016 RNU7-181P-201ENST00000517234 74 ntBASIC1.07□□□□□ -2.24
HOXD4P09016 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.07□□□□□ -2.24
HOXD4P09016 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
HOXD4P09016 GHRLOS.1-201ENST00000610995 70 ntBASIC1.07□□□□□ -2.24
HOXD4P09016 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.07□□□□□ -2.24
HOXD4P09016 RNU6-312P-201ENST00000364629 107 ntBASIC1.06□□□□□ -2.24
HOXD4P09016 U8.17-201ENST00000391292 132 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms