Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AL513534.2-201ENST00000603836 250 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 AC072026.1-201ENST00000605023 201 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 RNU2-4P-201ENST00000606190 192 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 AL365434.2-201ENST00000607979 234 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 Pinc.1-201ENST00000616452 154 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 MIR8063-201ENST00000621930 81 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 MIR6767-201ENST00000637302 66 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
CLDN1O95832 Y_RNA.29-201ENST00000362570 113 ntBASIC1.21□□□□□ -2.22
CLDN1O95832 Y_RNA.30-201ENST00000362572 97 ntBASIC1.21□□□□□ -2.22
CLDN1O95832 Y_RNA.233-201ENST00000364407 101 ntBASIC1.21□□□□□ -2.22
CLDN1O95832 Y_RNA.412-201ENST00000384001 104 ntBASIC1.21□□□□□ -2.22
CLDN1O95832 Y_RNA.432-201ENST00000384087 111 ntBASIC1.21□□□□□ -2.22
CLDN1O95832 MIR548A2-201ENST00000384956 97 ntBASIC1.21□□□□□ -2.22
CLDN1O95832 RNU2-64P-201ENST00000411315 191 ntBASIC1.21□□□□□ -2.22
CLDN1O95832 RPS27P16-201ENST00000425758 201 ntBASIC1.21□□□□□ -2.22
CLDN1O95832 SNRPGP13-201ENST00000442212 177 ntBASIC1.21□□□□□ -2.22
CLDN1O95832 SNRPGP8-201ENST00000454064 226 ntBASIC1.21□□□□□ -2.22
CLDN1O95832 AC079140.2-201ENST00000506193 142 ntBASIC1.21□□□□□ -2.22
CLDN1O95832 RNU6-561P-201ENST00000516222 102 ntBASIC1.21□□□□□ -2.22
CLDN1O95832 RNU6-197P-201ENST00000516680 100 ntBASIC1.21□□□□□ -2.22
CLDN1O95832 MRPS18CP4-201ENST00000535821 231 ntBASIC1.21□□□□□ -2.22
CLDN1O95832 U8.1-201ENST00000362843 134 ntBASIC1.2□□□□□ -2.22
CLDN1O95832 Y_RNA.634-201ENST00000364811 113 ntBASIC1.2□□□□□ -2.22
CLDN1O95832 RNU6-728P-201ENST00000365375 104 ntBASIC1.2□□□□□ -2.22
CLDN1O95832 SNORD38C-201ENST00000384381 69 ntBASIC1.2□□□□□ -2.22
CLDN1O95832 RNU4-70P-201ENST00000384579 139 ntBASIC1.2□□□□□ -2.22
CLDN1O95832 RNU6-1299P-201ENST00000516316 100 ntBASIC1.2□□□□□ -2.22
CLDN1O95832 SNORA81.3-201ENST00000517283 198 ntBASIC1.2□□□□□ -2.22
CLDN1O95832 AL161722.3-201ENST00000605789 2983 ntBASIC1.2□□□□□ -2.22
CLDN1O95832 AC106754.2-201ENST00000623006 233 ntBASIC1.2□□□□□ -2.22
CLDN1O95832 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.2□□□□□ -2.22
CLDN1O95832 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CLDN1O95832 Y_RNA.23-201ENST00000362496 106 ntBASIC1.19□□□□□ -2.22
CLDN1O95832 RNU6-888P-201ENST00000363010 101 ntBASIC1.19□□□□□ -2.22
CLDN1O95832 Y_RNA.91-201ENST00000363042 107 ntBASIC1.19□□□□□ -2.22
CLDN1O95832 MIR136-201ENST00000385207 82 ntBASIC1.19□□□□□ -2.22
CLDN1O95832 MIR802-201ENST00000390235 94 ntBASIC1.19□□□□□ -2.22
CLDN1O95832 SNORA26-201ENST00000391286 122 ntBASIC1.19□□□□□ -2.22
CLDN1O95832 Y_RNA.793-201ENST00000411222 111 ntBASIC1.19□□□□□ -2.22
CLDN1O95832 SNX2P2-201ENST00000424553 323 ntBASIC1.19□□□□□ -2.22
CLDN1O95832 AC004223.1-201ENST00000479840 271 ntBASIC1.19□□□□□ -2.22
CLDN1O95832 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.19□□□□□ -2.22
CLDN1O95832 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.19□□□□□ -2.22
CLDN1O95832 RNU4-57P-201ENST00000515980 135 ntBASIC1.19□□□□□ -2.22
CLDN1O95832 RNU6-902P-201ENST00000517212 91 ntBASIC1.19□□□□□ -2.22
CLDN1O95832 AC090425.1-201ENST00000610007 140 ntBASIC1.19□□□□□ -2.22
CLDN1O95832 U6.106-201ENST00000636360 105 ntBASIC1.19□□□□□ -2.22
CLDN1O95832 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CLDN1O95832 RNU6-682P-201ENST00000363843 106 ntBASIC1.18□□□□□ -2.22
CLDN1O95832 Y_RNA.182-201ENST00000363880 111 ntBASIC1.18□□□□□ -2.22
CLDN1O95832 Y_RNA.240-201ENST00000364469 95 ntBASIC1.18□□□□□ -2.22
CLDN1O95832 RNU6-1065P-201ENST00000384513 106 ntBASIC1.18□□□□□ -2.22
CLDN1O95832 MIR518F-201ENST00000384973 87 ntBASIC1.18□□□□□ -2.22
CLDN1O95832 AL451046.2-201ENST00000403074 277 ntBASIC1.18□□□□□ -2.22
CLDN1O95832 MIR548O-201ENST00000408583 114 ntBASIC1.18□□□□□ -2.22
CLDN1O95832 Y_RNA.622-201ENST00000411091 108 ntBASIC1.18□□□□□ -2.22
CLDN1O95832 RPL30P7-201ENST00000479312 323 ntBASIC1.18□□□□□ -2.22
CLDN1O95832 Y_RNA.797-201ENST00000515977 94 ntBASIC1.18□□□□□ -2.22
CLDN1O95832 RNU6-322P-201ENST00000516010 103 ntBASIC1.18□□□□□ -2.22
CLDN1O95832 RNU6-1219P-201ENST00000516143 112 ntBASIC1.18□□□□□ -2.22
CLDN1O95832 RNU7-25P-201ENST00000516544 62 ntBASIC1.18□□□□□ -2.22
CLDN1O95832 RNU6-365P-201ENST00000517113 106 ntBASIC1.18□□□□□ -2.22
CLDN1O95832 AC007751.1-201ENST00000529260 376 ntBASIC1.18□□□□□ -2.22
CLDN1O95832 AP002392.1-201ENST00000537692 208 ntBASIC1.18□□□□□ -2.22
CLDN1O95832 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
CLDN1O95832 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.18□□□□□ -2.22
CLDN1O95832 RNU6-978P-201ENST00000364371 103 ntBASIC1.17□□□□□ -2.22
CLDN1O95832 RNU6-312P-201ENST00000364629 107 ntBASIC1.17□□□□□ -2.22
CLDN1O95832 SNORD61-201ENST00000384252 73 ntBASIC1.17□□□□□ -2.22
CLDN1O95832 Y_RNA.547-201ENST00000384654 119 ntBASIC1.17□□□□□ -2.22
CLDN1O95832 MIR516B2-201ENST00000385190 85 ntBASIC1.17□□□□□ -2.22
CLDN1O95832 RPS29P23-201ENST00000458635 123 ntBASIC1.17□□□□□ -2.22
CLDN1O95832 Y_RNA.666-201ENST00000516187 112 ntBASIC1.17□□□□□ -2.22
CLDN1O95832 SNORA74.3-201ENST00000517108 154 ntBASIC1.17□□□□□ -2.22
CLDN1O95832 AC019176.1-201ENST00000518519 225 ntBASIC1.17□□□□□ -2.22
CLDN1O95832 AC022559.1-201ENST00000520905 205 ntBASIC1.17□□□□□ -2.22
CLDN1O95832 AL512310.8-201ENST00000550183 120 ntBASIC1.17□□□□□ -2.22
CLDN1O95832 GHRLOS.1-201ENST00000610995 70 ntBASIC1.17□□□□□ -2.22
CLDN1O95832 AC004792.1-201ENST00000614523 137 ntBASIC1.17□□□□□ -2.22
CLDN1O95832 Y_RNA.178-201ENST00000363832 102 ntBASIC1.16□□□□□ -2.22
CLDN1O95832 RNU6-643P-201ENST00000384018 107 ntBASIC1.16□□□□□ -2.22
CLDN1O95832 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
CLDN1O95832 RNU2-70P-201ENST00000410718 179 ntBASIC1.16□□□□□ -2.22
CLDN1O95832 RNA5SP61-201ENST00000516453 100 ntBASIC1.16□□□□□ -2.22
CLDN1O95832 RNU6-504P-201ENST00000516568 104 ntBASIC1.16□□□□□ -2.22
CLDN1O95832 RNU6-922P-201ENST00000516753 99 ntBASIC1.16□□□□□ -2.22
CLDN1O95832 RNU6-165P-201ENST00000517170 99 ntBASIC1.16□□□□□ -2.22
CLDN1O95832 MIR3664-201ENST00000579074 99 ntBASIC1.16□□□□□ -2.22
CLDN1O95832 MIR4431-201ENST00000579990 94 ntBASIC1.16□□□□□ -2.22
CLDN1O95832 MIR3937-201ENST00000580135 106 ntBASIC1.16□□□□□ -2.22
CLDN1O95832 AL365205.2-201ENST00000594586 68 ntBASIC1.16□□□□□ -2.22
CLDN1O95832 AL357312.1-201ENST00000603879 298 ntBASIC1.16□□□□□ -2.22
CLDN1O95832 MIR7974-201ENST00000615835 79 ntBASIC1.16□□□□□ -2.22
CLDN1O95832 FTX_2.1-201ENST00000618816 94 ntBASIC1.16□□□□□ -2.22
CLDN1O95832 MIR26B-201ENST00000362251 77 ntBASIC1.15□□□□□ -2.23
CLDN1O95832 MIR222-201ENST00000384992 110 ntBASIC1.15□□□□□ -2.23
CLDN1O95832 AL121914.1-201ENST00000450188 156 ntBASIC1.15□□□□□ -2.23
CLDN1O95832 SNORD123-201ENST00000459473 70 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 312 ms