Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MIR148A-201ENST00000362215 68 ntBASIC-0.79□□□□□ -2.54
ABCA1O95477 RNY4P28-201ENST00000365281 93 ntBASIC-0.79□□□□□ -2.54
ABCA1O95477 MTND3P8-201ENST00000412909 339 ntBASIC-0.79□□□□□ -2.54
ABCA1O95477 MTATP6P18-201ENST00000417994 673 ntBASIC-0.79□□□□□ -2.54
ABCA1O95477 SCARNA18B-201ENST00000458806 135 ntBASIC-0.79□□□□□ -2.54
ABCA1O95477 RNU7-149P-201ENST00000516739 59 ntBASIC-0.79□□□□□ -2.54
ABCA1O95477 AC245884.10-201ENST00000597355 337 ntBASIC-0.79□□□□□ -2.54
ABCA1O95477 AC073648.5-201ENST00000603502 305 ntBASIC-0.79□□□□□ -2.54
ABCA1O95477 MTND5P18-201ENST00000445624 1801 ntBASIC-0.79□□□□□ -2.54
ABCA1O95477 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.79□□□□□ -2.54
ABCA1O95477 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.8□□□□□ -2.54
ABCA1O95477 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 SNORD113-7-201ENST00000363762 77 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 RNU2-61P-201ENST00000411069 191 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 AC074085.1-201ENST00000413598 418 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.8□□□□□ -2.54
ABCA1O95477 AL356055.1-201ENST00000602528 446 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 AC124312.5-201ENST00000604451 268 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 RNU6-86P-201ENST00000606534 107 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 RNU6-268P-201ENST00000364174 107 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 SNORA40.5-201ENST00000391061 128 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 MTCO2P27-201ENST00000420740 428 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 MTATP6P26-201ENST00000445926 662 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 AC022137.1-201ENST00000483735 151 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 AC022441.3-201ENST00000605737 136 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 AC022140.2-201ENST00000623500 188 ntBASIC-0.8□□□□□ -2.54
ABCA1O95477 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 SNORD72-201ENST00000390994 80 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 AC096949.1-201ENST00000412047 152 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 SNORA13-201ENST00000458790 133 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 RNU7-66P-201ENST00000459469 62 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 RPS29P24-201ENST00000486345 171 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 MIR5188-201ENST00000583467 113 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 AL080274.1-201ENST00000605565 220 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 AC019193.3-201ENST00000609144 554 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 RNU6-403P-201ENST00000363163 104 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 SNORA26.6-201ENST00000391256 115 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.81□□□□□ -2.54
ABCA1O95477 RNU7-63P-201ENST00000459054 62 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 snoU83B.1-201ENST00000517136 88 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.81□□□□□ -2.54
ABCA1O95477 AC109347.2-201ENST00000610220 349 ntBASIC-0.81□□□□□ -2.54
ABCA1O95477 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.81□□□□□ -2.54
ABCA1O95477 RNU6-1214P-201ENST00000363650 109 ntBASIC-0.82□□□□□ -2.54
ABCA1O95477 RNU6-961P-201ENST00000363893 105 ntBASIC-0.82□□□□□ -2.54
ABCA1O95477 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.82□□□□□ -2.54
ABCA1O95477 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.82□□□□□ -2.54
ABCA1O95477 RNU6-601P-201ENST00000384540 107 ntBASIC-0.82□□□□□ -2.54
ABCA1O95477 RNU6-998P-201ENST00000515894 101 ntBASIC-0.82□□□□□ -2.54
ABCA1O95477 RNU6-254P-201ENST00000363377 107 ntBASIC-0.82□□□□□ -2.54
ABCA1O95477 RNU6-595P-201ENST00000363944 107 ntBASIC-0.82□□□□□ -2.54
ABCA1O95477 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.82□□□□□ -2.54
ABCA1O95477 MIR8485-201ENST00000401372 91 ntBASIC-0.82□□□□□ -2.54
ABCA1O95477 AL445193.1-201ENST00000441183 141 ntBASIC-0.82□□□□□ -2.54
ABCA1O95477 SNORD18.2-201ENST00000459604 70 ntBASIC-0.82□□□□□ -2.54
ABCA1O95477 MIR2681-201ENST00000581814 105 ntBASIC-0.82□□□□□ -2.54
ABCA1O95477 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.82□□□□□ -2.54
ABCA1O95477 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.83□□□□□ -2.54
ABCA1O95477 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.83□□□□□ -2.54
ABCA1O95477 RNU6-880P-201ENST00000384526 107 ntBASIC-0.83□□□□□ -2.54
ABCA1O95477 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
ABCA1O95477 U8.15-201ENST00000390947 134 ntBASIC-0.83□□□□□ -2.54
ABCA1O95477 SNORD41.1-201ENST00000391000 69 ntBASIC-0.83□□□□□ -2.54
ABCA1O95477 MIR548I3-201ENST00000408378 149 ntBASIC-0.83□□□□□ -2.54
ABCA1O95477 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.83□□□□□ -2.54
ABCA1O95477 SNORD5.1-201ENST00000458800 75 ntBASIC-0.83□□□□□ -2.54
ABCA1O95477 AC011352.1-201ENST00000512300 793 ntBASIC-0.83□□□□□ -2.54
ABCA1O95477 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.83□□□□□ -2.54
ABCA1O95477 AP001282.2-201ENST00000616149 309 ntBASIC-0.83□□□□□ -2.54
ABCA1O95477 AC092794.2-201ENST00000620933 563 ntBASIC-0.83□□□□□ -2.54
ABCA1O95477 RNU6-502P-201ENST00000362419 108 ntBASIC-0.84□□□□□ -2.54
ABCA1O95477 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.84□□□□□ -2.54
ABCA1O95477 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.84□□□□□ -2.54
ABCA1O95477 RNU6-949P-201ENST00000384040 107 ntBASIC-0.84□□□□□ -2.54
ABCA1O95477 RNU6-926P-201ENST00000384075 107 ntBASIC-0.84□□□□□ -2.54
ABCA1O95477 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.84□□□□□ -2.54
ABCA1O95477 RNU6-901P-201ENST00000384593 106 ntBASIC-0.84□□□□□ -2.54
ABCA1O95477 RNU6-192P-201ENST00000391253 100 ntBASIC-0.84□□□□□ -2.54
ABCA1O95477 RNU7-96P-201ENST00000459535 64 ntBASIC-0.84□□□□□ -2.54
ABCA1O95477 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.84□□□□□ -2.54
ABCA1O95477 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.84□□□□□ -2.54
ABCA1O95477 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.84□□□□□ -2.54
ABCA1O95477 RNU6-693P-201ENST00000516134 107 ntBASIC-0.84□□□□□ -2.54
ABCA1O95477 MIR2355-201ENST00000517199 87 ntBASIC-0.84□□□□□ -2.54
ABCA1O95477 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.84□□□□□ -2.54
ABCA1O95477 MIR9-2-201ENST00000384838 87 ntBASIC-0.84□□□□□ -2.54
ABCA1O95477 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.84□□□□□ -2.54
ABCA1O95477 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.84□□□□□ -2.54
ABCA1O95477 SNORD54-201ENST00000459159 67 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms