Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 SNORD115-26-201ENST00000365067 82 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-10-201ENST00000365073 81 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-43-201ENST00000365503 82 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-36-201ENST00000365629 82 ntBASIC0.89□□□□□ -2.27
SNX3O60493 RNY3P5-201ENST00000384127 102 ntBASIC0.89□□□□□ -2.27
SNX3O60493 RNU6-381P-201ENST00000391259 108 ntBASIC0.89□□□□□ -2.27
SNX3O60493 RNU2-55P-201ENST00000411146 174 ntBASIC0.89□□□□□ -2.27
SNX3O60493 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.89□□□□□ -2.27
SNX3O60493 AC087499.4-201ENST00000448505 178 ntBASIC0.89□□□□□ -2.27
SNX3O60493 AC107297.1-201ENST00000459991 176 ntBASIC0.89□□□□□ -2.27
SNX3O60493 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
SNX3O60493 PDCD5P2-201ENST00000507570 312 ntBASIC0.89□□□□□ -2.27
SNX3O60493 UBL5P1-201ENST00000507979 193 ntBASIC0.89□□□□□ -2.27
SNX3O60493 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.89□□□□□ -2.27
SNX3O60493 AC036111.3-201ENST00000526389 112 ntBASIC0.89□□□□□ -2.27
SNX3O60493 MIR4524B-201ENST00000581569 115 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-40-201ENST00000606510 82 ntBASIC0.89□□□□□ -2.27
SNX3O60493 AL020996.3-201ENST00000606617 222 ntBASIC0.89□□□□□ -2.27
SNX3O60493 AL442067.1-201ENST00000613261 223 ntBASIC0.89□□□□□ -2.27
SNX3O60493 AC012676.2-201ENST00000619258 186 ntBASIC0.89□□□□□ -2.27
SNX3O60493 Y_RNA.634-201ENST00000364811 113 ntBASIC0.88□□□□□ -2.27
SNX3O60493 Y_RNA.432-201ENST00000384087 111 ntBASIC0.88□□□□□ -2.27
SNX3O60493 Y_RNA.562-201ENST00000384695 113 ntBASIC0.88□□□□□ -2.27
SNX3O60493 RNA5SP95-201ENST00000410319 137 ntBASIC0.88□□□□□ -2.27
SNX3O60493 RNU2-70P-201ENST00000410718 179 ntBASIC0.88□□□□□ -2.27
SNX3O60493 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.88□□□□□ -2.27
SNX3O60493 RNU6-1132P-201ENST00000459214 107 ntBASIC0.88□□□□□ -2.27
SNX3O60493 RNU6-504P-201ENST00000516568 104 ntBASIC0.88□□□□□ -2.27
SNX3O60493 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.88□□□□□ -2.27
SNX3O60493 AC099654.10-201ENST00000640395 161 ntBASIC0.88□□□□□ -2.27
SNX3O60493 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SNX3O60493 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SNX3O60493 Y_RNA.199-201ENST00000364014 102 ntBASIC0.87□□□□□ -2.27
SNX3O60493 Y_RNA.262-201ENST00000364641 102 ntBASIC0.87□□□□□ -2.27
SNX3O60493 Y_RNA.292-201ENST00000364904 97 ntBASIC0.87□□□□□ -2.27
SNX3O60493 SNORA24-201ENST00000384096 131 ntBASIC0.87□□□□□ -2.27
SNX3O60493 RNU6-1228P-201ENST00000391014 107 ntBASIC0.87□□□□□ -2.27
SNX3O60493 SNORA26-201ENST00000391286 122 ntBASIC0.87□□□□□ -2.27
SNX3O60493 MIR548H3-201ENST00000408771 118 ntBASIC0.87□□□□□ -2.27
SNX3O60493 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.87□□□□□ -2.27
SNX3O60493 AC005840.1-201ENST00000498412 377 ntBASIC0.87□□□□□ -2.27
SNX3O60493 Y_RNA.668-201ENST00000516233 93 ntBASIC0.87□□□□□ -2.27
SNX3O60493 SNORA18.4-201ENST00000516440 124 ntBASIC0.87□□□□□ -2.27
SNX3O60493 MIR2115-201ENST00000516657 100 ntBASIC0.87□□□□□ -2.27
SNX3O60493 SNORD36C-201ENST00000516733 66 ntBASIC0.87□□□□□ -2.27
SNX3O60493 AP003484.1-201ENST00000530974 250 ntBASIC0.87□□□□□ -2.27
SNX3O60493 MIR4661-201ENST00000582720 75 ntBASIC0.87□□□□□ -2.27
SNX3O60493 RNU6-94P-201ENST00000607728 107 ntBASIC0.87□□□□□ -2.27
SNX3O60493 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.87□□□□□ -2.27
SNX3O60493 AC106800.4-201ENST00000614905 153 ntBASIC0.87□□□□□ -2.27
SNX3O60493 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
SNX3O60493 SNORD45.3-201ENST00000363836 72 ntBASIC0.86□□□□□ -2.27
SNX3O60493 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
SNX3O60493 RNU6-396P-201ENST00000365369 105 ntBASIC0.86□□□□□ -2.27
SNX3O60493 RNU4-17P-201ENST00000365598 141 ntBASIC0.86□□□□□ -2.27
SNX3O60493 Y_RNA.477-201ENST00000384352 108 ntBASIC0.86□□□□□ -2.27
SNX3O60493 Y_RNA.556-201ENST00000384677 113 ntBASIC0.86□□□□□ -2.27
SNX3O60493 SNORA40.5-201ENST00000391061 128 ntBASIC0.86□□□□□ -2.27
SNX3O60493 MIR1302-3-201ENST00000408128 138 ntBASIC0.86□□□□□ -2.27
SNX3O60493 RNU6-613P-201ENST00000410412 108 ntBASIC0.86□□□□□ -2.27
SNX3O60493 AF228730.3-201ENST00000436691 102 ntBASIC0.86□□□□□ -2.27
SNX3O60493 RNU7-67P-201ENST00000459003 62 ntBASIC0.86□□□□□ -2.27
SNX3O60493 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.86□□□□□ -2.27
SNX3O60493 RNU6-561P-201ENST00000516222 102 ntBASIC0.86□□□□□ -2.27
SNX3O60493 RNA5SP153-201ENST00000516498 76 ntBASIC0.86□□□□□ -2.27
SNX3O60493 RNU6-958P-201ENST00000516995 106 ntBASIC0.86□□□□□ -2.27
SNX3O60493 AP000942.4-201ENST00000604811 241 ntBASIC0.86□□□□□ -2.27
SNX3O60493 MIR6715A-201ENST00000615929 79 ntBASIC0.86□□□□□ -2.27
SNX3O60493 AC134878.1-201ENST00000619901 243 ntBASIC0.86□□□□□ -2.27
SNX3O60493 Y_RNA.140-201ENST00000363474 103 ntBASIC0.85□□□□□ -2.27
SNX3O60493 SNORD27-201ENST00000363981 72 ntBASIC0.85□□□□□ -2.27
SNX3O60493 SNORD113.3-201ENST00000364630 78 ntBASIC0.85□□□□□ -2.27
SNX3O60493 SNORA2B-201ENST00000384583 137 ntBASIC0.85□□□□□ -2.27
SNX3O60493 SNORD111-201ENST00000408139 94 ntBASIC0.85□□□□□ -2.27
SNX3O60493 FABP5P4-201ENST00000437203 171 ntBASIC0.85□□□□□ -2.27
SNX3O60493 AL118496.2-201ENST00000448300 230 ntBASIC0.85□□□□□ -2.27
SNX3O60493 snoU13.16-201ENST00000459350 104 ntBASIC0.85□□□□□ -2.27
SNX3O60493 MTND1P19-201ENST00000511780 315 ntBASIC0.85□□□□□ -2.27
SNX3O60493 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
SNX3O60493 RNY3P16-201ENST00000516338 101 ntBASIC0.85□□□□□ -2.27
SNX3O60493 AC104984.5-201ENST00000586878 94 ntBASIC0.85□□□□□ -2.27
SNX3O60493 AC097639.2-201ENST00000603159 172 ntBASIC0.85□□□□□ -2.27
SNX3O60493 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.84□□□□□ -2.27
SNX3O60493 SNORA27-201ENST00000384323 126 ntBASIC0.84□□□□□ -2.27
SNX3O60493 RNU6-125P-201ENST00000384505 107 ntBASIC0.84□□□□□ -2.27
SNX3O60493 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
SNX3O60493 AC090844.1-201ENST00000422019 156 ntBASIC0.84□□□□□ -2.27
SNX3O60493 AC087343.1-201ENST00000477341 475 ntBASIC0.84□□□□□ -2.27
SNX3O60493 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.84□□□□□ -2.27
SNX3O60493 Y_RNA.673-201ENST00000516306 88 ntBASIC0.84□□□□□ -2.27
SNX3O60493 RNA5SP255-201ENST00000516370 107 ntBASIC0.84□□□□□ -2.27
SNX3O60493 MIR4298-201ENST00000584380 73 ntBASIC0.84□□□□□ -2.27
SNX3O60493 AC013244.2-201ENST00000603396 103 ntBASIC0.84□□□□□ -2.27
SNX3O60493 Y_RNA.65-201ENST00000362846 100 ntBASIC0.83□□□□□ -2.28
SNX3O60493 Y_RNA.269-201ENST00000364685 89 ntBASIC0.83□□□□□ -2.28
SNX3O60493 RNY4P28-201ENST00000365281 93 ntBASIC0.83□□□□□ -2.28
SNX3O60493 Y_RNA.539-201ENST00000384635 107 ntBASIC0.83□□□□□ -2.28
SNX3O60493 RNU6-913P-201ENST00000390913 95 ntBASIC0.83□□□□□ -2.28
SNX3O60493 RPS3AP1-201ENST00000413190 320 ntBASIC0.83□□□□□ -2.28
SNX3O60493 POLR2J4-204ENST00000418424 324 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 221.5 ms