Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 SNORD115-41-201ENST00000363608 82 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORD115-11-201ENST00000363616 82 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORD115-5-201ENST00000363633 82 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORD115-39-201ENST00000363694 82 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORD115-4-201ENST00000363810 82 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORD115-16-201ENST00000363887 82 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORD115-6-201ENST00000363942 82 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORD115-42-201ENST00000364273 82 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORD115-15-201ENST00000364809 81 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORD115-1-201ENST00000364961 82 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORD115-26-201ENST00000365067 82 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORD115-10-201ENST00000365073 81 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORD115-43-201ENST00000365503 82 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORD115-36-201ENST00000365629 82 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORA51.10-201ENST00000384418 136 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 RNU4-43P-201ENST00000410628 137 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 Y_RNA.622-201ENST00000411091 108 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 Y_RNA.626-201ENST00000411288 95 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORD115-40-201ENST00000606510 82 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 AL157834.3-201ENST00000615543 103 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SEPT14P17-201ENST00000617978 177 ntBASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
TRBV4-1A0A0J9YWV2 Y_RNA.494-201ENST00000384432 111 ntBASIC0.94□□□□□ -2.26
TRBV4-1A0A0J9YWV2 RNU2-70P-201ENST00000410718 179 ntBASIC0.94□□□□□ -2.26
TRBV4-1A0A0J9YWV2 RNU7-90P-201ENST00000459216 62 ntBASIC0.94□□□□□ -2.26
TRBV4-1A0A0J9YWV2 OR2A41P-201ENST00000473586 105 ntBASIC0.94□□□□□ -2.26
TRBV4-1A0A0J9YWV2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.94□□□□□ -2.26
TRBV4-1A0A0J9YWV2 RNU6-561P-201ENST00000516222 102 ntBASIC0.94□□□□□ -2.26
TRBV4-1A0A0J9YWV2 RNY3P16-201ENST00000516338 101 ntBASIC0.94□□□□□ -2.26
TRBV4-1A0A0J9YWV2 RNU6-197P-201ENST00000516680 100 ntBASIC0.94□□□□□ -2.26
TRBV4-1A0A0J9YWV2 RNU6-1270P-201ENST00000517128 108 ntBASIC0.94□□□□□ -2.26
TRBV4-1A0A0J9YWV2 RNU6-111P-201ENST00000517179 105 ntBASIC0.94□□□□□ -2.26
TRBV4-1A0A0J9YWV2 AC243994.1-201ENST00000618627 109 ntBASIC0.94□□□□□ -2.26
TRBV4-1A0A0J9YWV2 MTND1P7-201ENST00000632801 297 ntBASIC0.94□□□□□ -2.26
TRBV4-1A0A0J9YWV2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORA20.1-201ENST00000364790 130 ntBASIC0.93□□□□□ -2.26
TRBV4-1A0A0J9YWV2 Y_RNA.308-201ENST00000365043 101 ntBASIC0.93□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORA40.5-201ENST00000391061 128 ntBASIC0.93□□□□□ -2.26
TRBV4-1A0A0J9YWV2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.93□□□□□ -2.26
TRBV4-1A0A0J9YWV2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
TRBV4-1A0A0J9YWV2 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.93□□□□□ -2.26
TRBV4-1A0A0J9YWV2 MIR4744-201ENST00000581563 82 ntBASIC0.93□□□□□ -2.26
TRBV4-1A0A0J9YWV2 AP000942.4-201ENST00000604811 241 ntBASIC0.93□□□□□ -2.26
TRBV4-1A0A0J9YWV2 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
TRBV4-1A0A0J9YWV2 AC134878.1-201ENST00000619901 243 ntBASIC0.93□□□□□ -2.26
TRBV4-1A0A0J9YWV2 AC008163.1-202ENST00000636004 2889 ntBASIC0.93□□□□□ -2.26
TRBV4-1A0A0J9YWV2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
TRBV4-1A0A0J9YWV2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.92□□□□□ -2.26
TRBV4-1A0A0J9YWV2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
TRBV4-1A0A0J9YWV2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
TRBV4-1A0A0J9YWV2 AL391516.1-201ENST00000554380 2449 ntBASIC0.92□□□□□ -2.26
TRBV4-1A0A0J9YWV2 Y_RNA.121-201ENST00000363309 113 ntBASIC0.92□□□□□ -2.26
TRBV4-1A0A0J9YWV2 Y_RNA.199-201ENST00000364014 102 ntBASIC0.92□□□□□ -2.26
TRBV4-1A0A0J9YWV2 Y_RNA.241-201ENST00000364470 117 ntBASIC0.92□□□□□ -2.26
TRBV4-1A0A0J9YWV2 RNU6-728P-201ENST00000365375 104 ntBASIC0.92□□□□□ -2.26
TRBV4-1A0A0J9YWV2 AC108667.1-201ENST00000428618 249 ntBASIC0.92□□□□□ -2.26
TRBV4-1A0A0J9YWV2 AC107297.1-201ENST00000459991 176 ntBASIC0.92□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORA18.4-201ENST00000516440 124 ntBASIC0.92□□□□□ -2.26
TRBV4-1A0A0J9YWV2 AP003484.1-201ENST00000530974 250 ntBASIC0.92□□□□□ -2.26
TRBV4-1A0A0J9YWV2 MIR548AO-201ENST00000579992 96 ntBASIC0.92□□□□□ -2.26
TRBV4-1A0A0J9YWV2 MIR4308-201ENST00000580634 81 ntBASIC0.92□□□□□ -2.26
TRBV4-1A0A0J9YWV2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
TRBV4-1A0A0J9YWV2 Y_RNA.7-201ENST00000362352 102 ntBASIC0.91□□□□□ -2.26
TRBV4-1A0A0J9YWV2 Y_RNA.23-201ENST00000362496 106 ntBASIC0.91□□□□□ -2.26
TRBV4-1A0A0J9YWV2 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
TRBV4-1A0A0J9YWV2 RNU6-493P-201ENST00000391321 108 ntBASIC0.91□□□□□ -2.26
TRBV4-1A0A0J9YWV2 AP1B1P2-201ENST00000416196 106 ntBASIC0.91□□□□□ -2.26
TRBV4-1A0A0J9YWV2 AF228730.3-201ENST00000436691 102 ntBASIC0.91□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SNORD36C-201ENST00000516733 66 ntBASIC0.91□□□□□ -2.26
TRBV4-1A0A0J9YWV2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.91□□□□□ -2.26
TRBV4-1A0A0J9YWV2 AC108706.1-201ENST00000611053 297 ntBASIC0.91□□□□□ -2.26
TRBV4-1A0A0J9YWV2 MIR6516-201ENST00000630554 81 ntBASIC0.91□□□□□ -2.26
TRBV4-1A0A0J9YWV2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TRBV4-1A0A0J9YWV2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
TRBV4-1A0A0J9YWV2 Y_RNA.238-201ENST00000364441 102 ntBASIC0.9□□□□□ -2.27
TRBV4-1A0A0J9YWV2 SNORA22-201ENST00000383907 134 ntBASIC0.9□□□□□ -2.27
TRBV4-1A0A0J9YWV2 Y_RNA.410-201ENST00000383992 113 ntBASIC0.9□□□□□ -2.27
TRBV4-1A0A0J9YWV2 SNORA22C-201ENST00000384614 134 ntBASIC0.9□□□□□ -2.27
TRBV4-1A0A0J9YWV2 MIR200A-201ENST00000384875 90 ntBASIC0.9□□□□□ -2.27
TRBV4-1A0A0J9YWV2 RNU6-578P-201ENST00000390980 103 ntBASIC0.9□□□□□ -2.27
TRBV4-1A0A0J9YWV2 snosnR66.1-201ENST00000391095 99 ntBASIC0.9□□□□□ -2.27
TRBV4-1A0A0J9YWV2 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.9□□□□□ -2.27
TRBV4-1A0A0J9YWV2 RNU6-613P-201ENST00000410412 108 ntBASIC0.9□□□□□ -2.27
TRBV4-1A0A0J9YWV2 snoU13.16-201ENST00000459350 104 ntBASIC0.9□□□□□ -2.27
TRBV4-1A0A0J9YWV2 MIR4295-201ENST00000585286 85 ntBASIC0.9□□□□□ -2.27
TRBV4-1A0A0J9YWV2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TRBV4-1A0A0J9YWV2 RNU6-923P-201ENST00000364753 107 ntBASIC0.89□□□□□ -2.27
TRBV4-1A0A0J9YWV2 Y_RNA.330-201ENST00000365230 109 ntBASIC0.89□□□□□ -2.27
TRBV4-1A0A0J9YWV2 SNORA1-201ENST00000384107 130 ntBASIC0.89□□□□□ -2.27
TRBV4-1A0A0J9YWV2 SNORA27-201ENST00000384323 126 ntBASIC0.89□□□□□ -2.27
TRBV4-1A0A0J9YWV2 Y_RNA.571-201ENST00000384753 98 ntBASIC0.89□□□□□ -2.27
TRBV4-1A0A0J9YWV2 BTF3P4-201ENST00000418852 495 ntBASIC0.89□□□□□ -2.27
TRBV4-1A0A0J9YWV2 RNU7-73P-201ENST00000458743 63 ntBASIC0.89□□□□□ -2.27
TRBV4-1A0A0J9YWV2 SNORD124-201ENST00000459577 104 ntBASIC0.89□□□□□ -2.27
TRBV4-1A0A0J9YWV2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.89□□□□□ -2.27
TRBV4-1A0A0J9YWV2 AC131055.1-201ENST00000584626 316 ntBASIC0.89□□□□□ -2.27
TRBV4-1A0A0J9YWV2 HSPE1P19-201ENST00000603327 295 ntBASIC0.89□□□□□ -2.27
TRBV4-1A0A0J9YWV2 AC009779.6-201ENST00000603972 165 ntBASIC0.89□□□□□ -2.27
TRBV4-1A0A0J9YWV2 RNU2-4P-201ENST00000606190 192 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms