Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 AC025033.1-201ENST00000463883 194 ntBASIC2.08□□□□□ -2.08
NR2E3Q9Y5X4 MRPS17P9-201ENST00000511924 393 ntBASIC2.08□□□□□ -2.08
NR2E3Q9Y5X4 RNU6-426P-201ENST00000516464 97 ntBASIC2.08□□□□□ -2.08
NR2E3Q9Y5X4 RNA5SP153-201ENST00000516498 76 ntBASIC2.08□□□□□ -2.08
NR2E3Q9Y5X4 Y_RNA.714-201ENST00000517065 90 ntBASIC2.08□□□□□ -2.08
NR2E3Q9Y5X4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.08□□□□□ -2.08
NR2E3Q9Y5X4 MIR4762-201ENST00000585261 75 ntBASIC2.08□□□□□ -2.08
NR2E3Q9Y5X4 AC120024.3-201ENST00000603167 156 ntBASIC2.08□□□□□ -2.08
NR2E3Q9Y5X4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NR2E3Q9Y5X4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.08□□□□□ -2.08
NR2E3Q9Y5X4 Y_RNA.66-201ENST00000362862 102 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 RNU6-1082P-201ENST00000364574 107 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 RNU6-81P-201ENST00000365608 104 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 RNU6-597P-201ENST00000365620 102 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 Y_RNA.393-201ENST00000383936 102 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 Y_RNA.432-201ENST00000384087 111 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 Y_RNA.488-201ENST00000384403 102 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 SNORA19-201ENST00000384737 128 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 AL356379.1-201ENST00000414105 126 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 AC003989.2-201ENST00000440224 169 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 TMSB4XP3-201ENST00000445144 114 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 RNA5SP233-201ENST00000459153 113 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 RNU7-34P-201ENST00000459394 64 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 OR9P1P-201ENST00000496431 281 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 RNU6-1299P-201ENST00000516316 100 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 RNU1-40P-201ENST00000516816 164 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 RNU1-97P-201ENST00000516872 164 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 MIR378D2-201ENST00000580636 98 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 AC008507.4-201ENST00000585464 127 ntBASIC2.07□□□□□ -2.08
NR2E3Q9Y5X4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
NR2E3Q9Y5X4 MIR126-201ENST00000362291 85 ntBASIC2.06□□□□□ -2.08
NR2E3Q9Y5X4 U8.5-201ENST00000364528 136 ntBASIC2.06□□□□□ -2.08
NR2E3Q9Y5X4 Y_RNA.251-201ENST00000364551 99 ntBASIC2.06□□□□□ -2.08
NR2E3Q9Y5X4 RNU6-1336P-201ENST00000383886 109 ntBASIC2.06□□□□□ -2.08
NR2E3Q9Y5X4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.06□□□□□ -2.08
NR2E3Q9Y5X4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.06□□□□□ -2.08
NR2E3Q9Y5X4 AC092991.1-201ENST00000477176 376 ntBASIC2.06□□□□□ -2.08
NR2E3Q9Y5X4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.06□□□□□ -2.08
NR2E3Q9Y5X4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.06□□□□□ -2.08
NR2E3Q9Y5X4 MIR548X2-201ENST00000579776 100 ntBASIC2.06□□□□□ -2.08
NR2E3Q9Y5X4 Pinc.1-201ENST00000616452 154 ntBASIC2.06□□□□□ -2.08
NR2E3Q9Y5X4 AC132825.6-201ENST00000638861 357 ntBASIC2.06□□□□□ -2.08
NR2E3Q9Y5X4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
NR2E3Q9Y5X4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.05□□□□□ -2.08
NR2E3Q9Y5X4 RNU6-257P-201ENST00000410238 98 ntBASIC2.05□□□□□ -2.08
NR2E3Q9Y5X4 RPL30P13-201ENST00000418873 348 ntBASIC2.05□□□□□ -2.08
NR2E3Q9Y5X4 AC023449.1-201ENST00000454464 154 ntBASIC2.05□□□□□ -2.08
NR2E3Q9Y5X4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.05□□□□□ -2.08
NR2E3Q9Y5X4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.05□□□□□ -2.08
NR2E3Q9Y5X4 RNA5SP364-201ENST00000516938 78 ntBASIC2.05□□□□□ -2.08
NR2E3Q9Y5X4 MIR3646-201ENST00000578301 84 ntBASIC2.05□□□□□ -2.08
NR2E3Q9Y5X4 AC087685.1-201ENST00000587507 141 ntBASIC2.05□□□□□ -2.08
NR2E3Q9Y5X4 AL627230.6-201ENST00000611129 280 ntBASIC2.05□□□□□ -2.08
NR2E3Q9Y5X4 MIR6779-201ENST00000617283 64 ntBASIC2.05□□□□□ -2.08
NR2E3Q9Y5X4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.05□□□□□ -2.08
NR2E3Q9Y5X4 MIRLET7C-201ENST00000362160 84 ntBASIC2.04□□□□□ -2.08
NR2E3Q9Y5X4 SNORD68-201ENST00000363214 84 ntBASIC2.04□□□□□ -2.08
NR2E3Q9Y5X4 SNORD50B-201ENST00000364995 70 ntBASIC2.04□□□□□ -2.08
NR2E3Q9Y5X4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NR2E3Q9Y5X4 MIR9-3-201ENST00000385084 90 ntBASIC2.04□□□□□ -2.08
NR2E3Q9Y5X4 Y_RNA.586-201ENST00000391146 98 ntBASIC2.04□□□□□ -2.08
NR2E3Q9Y5X4 RNU6-588P-201ENST00000410281 105 ntBASIC2.04□□□□□ -2.08
NR2E3Q9Y5X4 SNRPGP14-201ENST00000435400 219 ntBASIC2.04□□□□□ -2.08
NR2E3Q9Y5X4 RN7SL274P-201ENST00000492268 272 ntBASIC2.04□□□□□ -2.08
NR2E3Q9Y5X4 AC007751.1-201ENST00000529260 376 ntBASIC2.04□□□□□ -2.08
NR2E3Q9Y5X4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.04□□□□□ -2.08
NR2E3Q9Y5X4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.04□□□□□ -2.08
NR2E3Q9Y5X4 Y_RNA.497-201ENST00000384447 98 ntBASIC2.03□□□□□ -2.08
NR2E3Q9Y5X4 MIR548A2-201ENST00000384956 97 ntBASIC2.03□□□□□ -2.08
NR2E3Q9Y5X4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
NR2E3Q9Y5X4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.03□□□□□ -2.08
NR2E3Q9Y5X4 AC099513.1-201ENST00000490423 301 ntBASIC2.03□□□□□ -2.08
NR2E3Q9Y5X4 SNORA25.12-201ENST00000516202 82 ntBASIC2.03□□□□□ -2.08
NR2E3Q9Y5X4 AC112693.2-201ENST00000556538 232 ntBASIC2.03□□□□□ -2.08
NR2E3Q9Y5X4 MIR4255-201ENST00000579351 72 ntBASIC2.03□□□□□ -2.08
NR2E3Q9Y5X4 AC021506.2-201ENST00000612354 169 ntBASIC2.03□□□□□ -2.08
NR2E3Q9Y5X4 AL513423.1-201ENST00000621695 132 ntBASIC2.03□□□□□ -2.08
NR2E3Q9Y5X4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.03□□□□□ -2.08
NR2E3Q9Y5X4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NR2E3Q9Y5X4 AL442644.1-201ENST00000454390 3105 ntBASIC2.03□□□□□ -2.08
NR2E3Q9Y5X4 RNU6-414P-201ENST00000363705 104 ntBASIC2.02□□□□□ -2.09
NR2E3Q9Y5X4 SNORA20-201ENST00000384662 132 ntBASIC2.02□□□□□ -2.09
NR2E3Q9Y5X4 MIR4662B-201ENST00000579498 81 ntBASIC2.02□□□□□ -2.09
NR2E3Q9Y5X4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
NR2E3Q9Y5X4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
NR2E3Q9Y5X4 AC010332.2-201ENST00000613083 1904 ntBASIC2.01□□□□□ -2.09
NR2E3Q9Y5X4 Y_RNA.242-201ENST00000364473 110 ntBASIC2.01□□□□□ -2.09
NR2E3Q9Y5X4 Y_RNA.343-201ENST00000365354 112 ntBASIC2.01□□□□□ -2.09
NR2E3Q9Y5X4 SNORD61-201ENST00000384252 73 ntBASIC2.01□□□□□ -2.09
NR2E3Q9Y5X4 RNU6-424P-201ENST00000384367 105 ntBASIC2.01□□□□□ -2.09
NR2E3Q9Y5X4 Y_RNA.521-201ENST00000384560 114 ntBASIC2.01□□□□□ -2.09
NR2E3Q9Y5X4 SNORA75.5-201ENST00000391291 81 ntBASIC2.01□□□□□ -2.09
NR2E3Q9Y5X4 RNU2-70P-201ENST00000410718 179 ntBASIC2.01□□□□□ -2.09
NR2E3Q9Y5X4 MLLT10P1-201ENST00000418346 262 ntBASIC2.01□□□□□ -2.09
NR2E3Q9Y5X4 MTND4LP9-201ENST00000427694 174 ntBASIC2.01□□□□□ -2.09
NR2E3Q9Y5X4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.01□□□□□ -2.09
NR2E3Q9Y5X4 AP001485.1-201ENST00000604799 199 ntBASIC2.01□□□□□ -2.09
NR2E3Q9Y5X4 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.01□□□□□ -2.09
NR2E3Q9Y5X4 MIR6844-201ENST00000637122 62 ntBASIC2.01□□□□□ -2.09
NR2E3Q9Y5X4 RNU6-460P-201ENST00000391158 108 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 207.7 ms