Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SNX9Q9Y5X1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SNX9Q9Y5X1 Y_RNA.23-201ENST00000362496 106 ntBASIC1.51□□□□□ -2.17
SNX9Q9Y5X1 U8.1-201ENST00000362843 134 ntBASIC1.51□□□□□ -2.17
SNX9Q9Y5X1 Y_RNA.91-201ENST00000363042 107 ntBASIC1.51□□□□□ -2.17
SNX9Q9Y5X1 Y_RNA.164-201ENST00000363709 102 ntBASIC1.51□□□□□ -2.17
SNX9Q9Y5X1 RNU6-268P-201ENST00000364174 107 ntBASIC1.51□□□□□ -2.17
SNX9Q9Y5X1 Y_RNA.336-201ENST00000365307 109 ntBASIC1.51□□□□□ -2.17
SNX9Q9Y5X1 Y_RNA.441-201ENST00000384123 112 ntBASIC1.51□□□□□ -2.17
SNX9Q9Y5X1 RNU6-163P-201ENST00000384396 106 ntBASIC1.51□□□□□ -2.17
SNX9Q9Y5X1 MIR15B-201ENST00000385045 98 ntBASIC1.51□□□□□ -2.17
SNX9Q9Y5X1 AC023449.1-201ENST00000454464 154 ntBASIC1.51□□□□□ -2.17
SNX9Q9Y5X1 RNA5SP153-201ENST00000516498 76 ntBASIC1.51□□□□□ -2.17
SNX9Q9Y5X1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.51□□□□□ -2.17
SNX9Q9Y5X1 MIR4778-201ENST00000577635 80 ntBASIC1.51□□□□□ -2.17
SNX9Q9Y5X1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.51□□□□□ -2.17
SNX9Q9Y5X1 SNORD3E-202ENST00000627253 216 ntBASIC1.51□□□□□ -2.17
SNX9Q9Y5X1 Y_RNA.66-201ENST00000362862 102 ntBASIC1.5□□□□□ -2.17
SNX9Q9Y5X1 Y_RNA.634-201ENST00000364811 113 ntBASIC1.5□□□□□ -2.17
SNX9Q9Y5X1 RNU6-728P-201ENST00000365375 104 ntBASIC1.5□□□□□ -2.17
SNX9Q9Y5X1 Y_RNA.555-201ENST00000384673 110 ntBASIC1.5□□□□□ -2.17
SNX9Q9Y5X1 MIR526A1-201ENST00000384897 85 ntBASIC1.5□□□□□ -2.17
SNX9Q9Y5X1 MIR891A-201ENST00000401237 79 ntBASIC1.5□□□□□ -2.17
SNX9Q9Y5X1 AL121914.1-201ENST00000450188 156 ntBASIC1.5□□□□□ -2.17
SNX9Q9Y5X1 AC009474.2-201ENST00000451383 136 ntBASIC1.5□□□□□ -2.17
SNX9Q9Y5X1 RNA5SP445-201ENST00000515889 115 ntBASIC1.5□□□□□ -2.17
SNX9Q9Y5X1 Y_RNA.666-201ENST00000516187 112 ntBASIC1.5□□□□□ -2.17
SNX9Q9Y5X1 RNU6-1299P-201ENST00000516316 100 ntBASIC1.5□□□□□ -2.17
SNX9Q9Y5X1 SUMO2P16-201ENST00000519475 264 ntBASIC1.5□□□□□ -2.17
SNX9Q9Y5X1 MIR4421-201ENST00000578133 69 ntBASIC1.5□□□□□ -2.17
SNX9Q9Y5X1 MIR4662B-201ENST00000579498 81 ntBASIC1.5□□□□□ -2.17
SNX9Q9Y5X1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SNX9Q9Y5X1 Y_RNA.180-201ENST00000363867 113 ntBASIC1.49□□□□□ -2.17
SNX9Q9Y5X1 Y_RNA.432-201ENST00000384087 111 ntBASIC1.49□□□□□ -2.17
SNX9Q9Y5X1 MIR548A2-201ENST00000384956 97 ntBASIC1.49□□□□□ -2.17
SNX9Q9Y5X1 RNU6-1135P-201ENST00000411083 103 ntBASIC1.49□□□□□ -2.17
SNX9Q9Y5X1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.49□□□□□ -2.17
SNX9Q9Y5X1 RNU6-197P-201ENST00000516680 100 ntBASIC1.49□□□□□ -2.17
SNX9Q9Y5X1 AC090142.3-201ENST00000519012 385 ntBASIC1.49□□□□□ -2.17
SNX9Q9Y5X1 AC007751.1-201ENST00000529260 376 ntBASIC1.49□□□□□ -2.17
SNX9Q9Y5X1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.49□□□□□ -2.17
SNX9Q9Y5X1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.49□□□□□ -2.17
SNX9Q9Y5X1 MIR4431-201ENST00000579990 94 ntBASIC1.49□□□□□ -2.17
SNX9Q9Y5X1 snoU13.31-201ENST00000607291 104 ntBASIC1.49□□□□□ -2.17
SNX9Q9Y5X1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.49□□□□□ -2.17
SNX9Q9Y5X1 SNORD14E-201ENST00000364009 85 ntBASIC1.48□□□□□ -2.17
SNX9Q9Y5X1 RNU6-442P-201ENST00000383968 104 ntBASIC1.48□□□□□ -2.17
SNX9Q9Y5X1 SNORD61-201ENST00000384252 73 ntBASIC1.48□□□□□ -2.17
SNX9Q9Y5X1 MIR653-201ENST00000385279 96 ntBASIC1.48□□□□□ -2.17
SNX9Q9Y5X1 RNU6-394P-201ENST00000410735 107 ntBASIC1.48□□□□□ -2.17
SNX9Q9Y5X1 AC015922.2-201ENST00000435593 184 ntBASIC1.48□□□□□ -2.17
SNX9Q9Y5X1 SEPT7P4-201ENST00000437076 306 ntBASIC1.48□□□□□ -2.17
SNX9Q9Y5X1 Y_RNA.662-201ENST00000516028 97 ntBASIC1.48□□□□□ -2.17
SNX9Q9Y5X1 RNU7-121P-201ENST00000516604 62 ntBASIC1.48□□□□□ -2.17
SNX9Q9Y5X1 MIR4498-201ENST00000577599 66 ntBASIC1.48□□□□□ -2.17
SNX9Q9Y5X1 MIR7974-201ENST00000615835 79 ntBASIC1.48□□□□□ -2.17
SNX9Q9Y5X1 AL161722.3-201ENST00000605789 2983 ntBASIC1.48□□□□□ -2.17
SNX9Q9Y5X1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
SNX9Q9Y5X1 Y_RNA.4-201ENST00000362333 112 ntBASIC1.47□□□□□ -2.17
SNX9Q9Y5X1 SNORA7.1-201ENST00000363750 139 ntBASIC1.47□□□□□ -2.17
SNX9Q9Y5X1 RNU6-978P-201ENST00000364371 103 ntBASIC1.47□□□□□ -2.17
SNX9Q9Y5X1 RNU6-643P-201ENST00000384018 107 ntBASIC1.47□□□□□ -2.17
SNX9Q9Y5X1 MIR150-201ENST00000385048 84 ntBASIC1.47□□□□□ -2.17
SNX9Q9Y5X1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.47□□□□□ -2.17
SNX9Q9Y5X1 HMGN2P32-201ENST00000444648 269 ntBASIC1.47□□□□□ -2.17
SNX9Q9Y5X1 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
SNX9Q9Y5X1 RNU6-917P-201ENST00000516294 104 ntBASIC1.47□□□□□ -2.17
SNX9Q9Y5X1 RNU6-830P-201ENST00000516353 107 ntBASIC1.47□□□□□ -2.17
SNX9Q9Y5X1 RNU6-902P-201ENST00000517212 91 ntBASIC1.47□□□□□ -2.17
SNX9Q9Y5X1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SNX9Q9Y5X1 AP001485.1-201ENST00000604799 199 ntBASIC1.47□□□□□ -2.17
SNX9Q9Y5X1 SNORD33-201ENST00000362761 85 ntBASIC1.46□□□□□ -2.18
SNX9Q9Y5X1 RNU4-84P-201ENST00000364200 139 ntBASIC1.46□□□□□ -2.18
SNX9Q9Y5X1 Y_RNA.270-201ENST00000364693 104 ntBASIC1.46□□□□□ -2.18
SNX9Q9Y5X1 SNORD24-201ENST00000383884 75 ntBASIC1.46□□□□□ -2.18
SNX9Q9Y5X1 MIR513A1-201ENST00000385138 129 ntBASIC1.46□□□□□ -2.18
SNX9Q9Y5X1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.46□□□□□ -2.18
SNX9Q9Y5X1 RNA5SP61-201ENST00000516453 100 ntBASIC1.46□□□□□ -2.18
SNX9Q9Y5X1 RNU6-365P-201ENST00000517113 106 ntBASIC1.46□□□□□ -2.18
SNX9Q9Y5X1 ICE2P2-201ENST00000483823 2787 ntBASIC1.45□□□□□ -2.18
SNX9Q9Y5X1 RNU6-199P-201ENST00000362954 107 ntBASIC1.45□□□□□ -2.18
SNX9Q9Y5X1 RNU6-888P-201ENST00000363010 101 ntBASIC1.45□□□□□ -2.18
SNX9Q9Y5X1 Y_RNA.242-201ENST00000364473 110 ntBASIC1.45□□□□□ -2.18
SNX9Q9Y5X1 SNORD1A-201ENST00000364968 72 ntBASIC1.45□□□□□ -2.18
SNX9Q9Y5X1 Y_RNA.547-201ENST00000384654 119 ntBASIC1.45□□□□□ -2.18
SNX9Q9Y5X1 MIR518F-201ENST00000384973 87 ntBASIC1.45□□□□□ -2.18
SNX9Q9Y5X1 RNU2-70P-201ENST00000410718 179 ntBASIC1.45□□□□□ -2.18
SNX9Q9Y5X1 AC092991.1-201ENST00000477176 376 ntBASIC1.45□□□□□ -2.18
SNX9Q9Y5X1 AC005840.1-201ENST00000498412 377 ntBASIC1.45□□□□□ -2.18
SNX9Q9Y5X1 RNU6-126P-201ENST00000516685 103 ntBASIC1.45□□□□□ -2.18
SNX9Q9Y5X1 MIR378D2-201ENST00000580636 98 ntBASIC1.45□□□□□ -2.18
SNX9Q9Y5X1 AC106754.2-201ENST00000623006 233 ntBASIC1.45□□□□□ -2.18
SNX9Q9Y5X1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SNX9Q9Y5X1 MIR452-201ENST00000385020 85 ntBASIC1.44□□□□□ -2.18
SNX9Q9Y5X1 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
SNX9Q9Y5X1 RNA5SP247-201ENST00000411181 105 ntBASIC1.44□□□□□ -2.18
SNX9Q9Y5X1 RNU4-57P-201ENST00000515980 135 ntBASIC1.44□□□□□ -2.18
SNX9Q9Y5X1 RNU7-25P-201ENST00000516544 62 ntBASIC1.44□□□□□ -2.18
SNX9Q9Y5X1 RNU6-504P-201ENST00000516568 104 ntBASIC1.44□□□□□ -2.18
SNX9Q9Y5X1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms