Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 RNU6-1270P-201ENST00000517128 108 ntBASIC1.44□□□□□ -2.18
CLDN16Q9Y5I7 AP002392.1-201ENST00000537692 208 ntBASIC1.44□□□□□ -2.18
CLDN16Q9Y5I7 Y_RNA.91-201ENST00000363042 107 ntBASIC1.43□□□□□ -2.18
CLDN16Q9Y5I7 RNU6-60P-201ENST00000364792 103 ntBASIC1.43□□□□□ -2.18
CLDN16Q9Y5I7 Y_RNA.634-201ENST00000364811 113 ntBASIC1.43□□□□□ -2.18
CLDN16Q9Y5I7 RNU6-484P-201ENST00000384016 107 ntBASIC1.43□□□□□ -2.18
CLDN16Q9Y5I7 RPS27P16-201ENST00000425758 201 ntBASIC1.43□□□□□ -2.18
CLDN16Q9Y5I7 SNORD123-201ENST00000459473 70 ntBASIC1.43□□□□□ -2.18
CLDN16Q9Y5I7 RNA5SP153-201ENST00000516498 76 ntBASIC1.43□□□□□ -2.18
CLDN16Q9Y5I7 SNORA74.3-201ENST00000517108 154 ntBASIC1.43□□□□□ -2.18
CLDN16Q9Y5I7 AC022559.1-201ENST00000520905 205 ntBASIC1.43□□□□□ -2.18
CLDN16Q9Y5I7 AL512310.8-201ENST00000550183 120 ntBASIC1.43□□□□□ -2.18
CLDN16Q9Y5I7 BX248123.2-201ENST00000606318 124 ntBASIC1.43□□□□□ -2.18
CLDN16Q9Y5I7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.43□□□□□ -2.18
CLDN16Q9Y5I7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.43□□□□□ -2.18
CLDN16Q9Y5I7 Y_RNA.29-201ENST00000362570 113 ntBASIC1.42□□□□□ -2.18
CLDN16Q9Y5I7 Y_RNA.547-201ENST00000384654 119 ntBASIC1.42□□□□□ -2.18
CLDN16Q9Y5I7 MIR520C-201ENST00000385005 87 ntBASIC1.42□□□□□ -2.18
CLDN16Q9Y5I7 SNORD41-201ENST00000386967 70 ntBASIC1.42□□□□□ -2.18
CLDN16Q9Y5I7 RNU4-62P-201ENST00000410125 130 ntBASIC1.42□□□□□ -2.18
CLDN16Q9Y5I7 AC108667.1-201ENST00000428618 249 ntBASIC1.42□□□□□ -2.18
CLDN16Q9Y5I7 RPL39P39-201ENST00000455840 151 ntBASIC1.42□□□□□ -2.18
CLDN16Q9Y5I7 RN7SKP88-201ENST00000516847 250 ntBASIC1.42□□□□□ -2.18
CLDN16Q9Y5I7 MIR3664-201ENST00000579074 99 ntBASIC1.42□□□□□ -2.18
CLDN16Q9Y5I7 7SK.8-201ENST00000612110 250 ntBASIC1.42□□□□□ -2.18
CLDN16Q9Y5I7 7SK.11-201ENST00000615477 250 ntBASIC1.42□□□□□ -2.18
CLDN16Q9Y5I7 7SK.13-201ENST00000622040 250 ntBASIC1.42□□□□□ -2.18
CLDN16Q9Y5I7 U6.106-201ENST00000636360 105 ntBASIC1.42□□□□□ -2.18
CLDN16Q9Y5I7 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
CLDN16Q9Y5I7 Y_RNA.233-201ENST00000364407 101 ntBASIC1.41□□□□□ -2.18
CLDN16Q9Y5I7 RNU6-275P-201ENST00000364910 107 ntBASIC1.41□□□□□ -2.18
CLDN16Q9Y5I7 RNA5SP363-201ENST00000365072 115 ntBASIC1.41□□□□□ -2.18
CLDN16Q9Y5I7 Y_RNA.412-201ENST00000384001 104 ntBASIC1.41□□□□□ -2.18
CLDN16Q9Y5I7 SNORD61-201ENST00000384252 73 ntBASIC1.41□□□□□ -2.18
CLDN16Q9Y5I7 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
CLDN16Q9Y5I7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CLDN16Q9Y5I7 U8.17-201ENST00000391292 132 ntBASIC1.41□□□□□ -2.18
CLDN16Q9Y5I7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.41□□□□□ -2.18
CLDN16Q9Y5I7 RNU6-830P-201ENST00000516353 107 ntBASIC1.41□□□□□ -2.18
CLDN16Q9Y5I7 SNORD111.1-201ENST00000516421 86 ntBASIC1.41□□□□□ -2.18
CLDN16Q9Y5I7 RNU6-197P-201ENST00000516680 100 ntBASIC1.41□□□□□ -2.18
CLDN16Q9Y5I7 RNU7-181P-201ENST00000517234 74 ntBASIC1.41□□□□□ -2.18
CLDN16Q9Y5I7 SNORA81.3-201ENST00000517283 198 ntBASIC1.41□□□□□ -2.18
CLDN16Q9Y5I7 AC072026.1-201ENST00000605023 201 ntBASIC1.41□□□□□ -2.18
CLDN16Q9Y5I7 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.41□□□□□ -2.18
CLDN16Q9Y5I7 SNORA25.8-201ENST00000364831 128 ntBASIC1.4□□□□□ -2.19
CLDN16Q9Y5I7 SNORD24-201ENST00000383884 75 ntBASIC1.4□□□□□ -2.19
CLDN16Q9Y5I7 MIR517C-201ENST00000385103 95 ntBASIC1.4□□□□□ -2.19
CLDN16Q9Y5I7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.4□□□□□ -2.19
CLDN16Q9Y5I7 AL603825.1-201ENST00000438481 80 ntBASIC1.4□□□□□ -2.19
CLDN16Q9Y5I7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.4□□□□□ -2.19
CLDN16Q9Y5I7 Y_RNA.700-201ENST00000516806 100 ntBASIC1.4□□□□□ -2.19
CLDN16Q9Y5I7 CYP3A52P-201ENST00000563326 91 ntBASIC1.4□□□□□ -2.19
CLDN16Q9Y5I7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CLDN16Q9Y5I7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CLDN16Q9Y5I7 MIR26B-201ENST00000362251 77 ntBASIC1.39□□□□□ -2.19
CLDN16Q9Y5I7 SNORD115-28-201ENST00000363931 81 ntBASIC1.39□□□□□ -2.19
CLDN16Q9Y5I7 SNORA1.2-201ENST00000365189 134 ntBASIC1.39□□□□□ -2.19
CLDN16Q9Y5I7 Y_RNA.435-201ENST00000384095 112 ntBASIC1.39□□□□□ -2.19
CLDN16Q9Y5I7 RNU6-1067P-201ENST00000384752 107 ntBASIC1.39□□□□□ -2.19
CLDN16Q9Y5I7 AC006461.1-201ENST00000412637 326 ntBASIC1.39□□□□□ -2.19
CLDN16Q9Y5I7 AC107297.1-201ENST00000459991 176 ntBASIC1.39□□□□□ -2.19
CLDN16Q9Y5I7 RNU6-1219P-201ENST00000516143 112 ntBASIC1.39□□□□□ -2.19
CLDN16Q9Y5I7 AP000942.3-201ENST00000603702 160 ntBASIC1.39□□□□□ -2.19
CLDN16Q9Y5I7 Y_RNA.75-201ENST00000362927 97 ntBASIC1.38□□□□□ -2.19
CLDN16Q9Y5I7 Y_RNA.370-201ENST00000365589 108 ntBASIC1.38□□□□□ -2.19
CLDN16Q9Y5I7 RNU6-643P-201ENST00000384018 107 ntBASIC1.38□□□□□ -2.19
CLDN16Q9Y5I7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CLDN16Q9Y5I7 RNU4-43P-201ENST00000410628 137 ntBASIC1.38□□□□□ -2.19
CLDN16Q9Y5I7 RNU7-43P-201ENST00000516554 64 ntBASIC1.38□□□□□ -2.19
CLDN16Q9Y5I7 RNU6-182P-201ENST00000516970 105 ntBASIC1.38□□□□□ -2.19
CLDN16Q9Y5I7 MRPS18CP4-201ENST00000535821 231 ntBASIC1.38□□□□□ -2.19
CLDN16Q9Y5I7 AL160236.1-201ENST00000556317 195 ntBASIC1.38□□□□□ -2.19
CLDN16Q9Y5I7 SNORD53B-201ENST00000577887 78 ntBASIC1.38□□□□□ -2.19
CLDN16Q9Y5I7 MIR4764-201ENST00000580680 88 ntBASIC1.38□□□□□ -2.19
CLDN16Q9Y5I7 MIR548AR-201ENST00000582191 57 ntBASIC1.38□□□□□ -2.19
CLDN16Q9Y5I7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CLDN16Q9Y5I7 MIR8065-201ENST00000620577 100 ntBASIC1.38□□□□□ -2.19
CLDN16Q9Y5I7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 Y_RNA.66-201ENST00000362862 102 ntBASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 RNU6-888P-201ENST00000363010 101 ntBASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 Y_RNA.241-201ENST00000364470 117 ntBASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 Y_RNA.357-201ENST00000365487 109 ntBASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 SNORD26-201ENST00000384147 75 ntBASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 Y_RNA.521-201ENST00000384560 114 ntBASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 MIR518F-201ENST00000384973 87 ntBASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 MIR1304-201ENST00000408243 91 ntBASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 AC108059.2-201ENST00000434626 151 ntBASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 SNORD116-25-201ENST00000516517 92 ntBASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 RNU6-794P-201ENST00000517261 64 ntBASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 AC007751.1-201ENST00000529260 376 ntBASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 MIR378D2-201ENST00000580636 98 ntBASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 AC004792.1-201ENST00000614523 137 ntBASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 AC134878.1-201ENST00000619901 243 ntBASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
CLDN16Q9Y5I7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.36□□□□□ -2.19
CLDN16Q9Y5I7 Y_RNA.23-201ENST00000362496 106 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms