Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 SNORD14A-201ENST00000606526 91 ntBASIC3.66□□□□□ -1.82
PCDHGA4Q9Y5G9 AC022513.1-201ENST00000624512 117 ntBASIC3.66□□□□□ -1.82
PCDHGA4Q9Y5G9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PCDHGA4Q9Y5G9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.65□□□□□ -1.82
PCDHGA4Q9Y5G9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
PCDHGA4Q9Y5G9 MAPK10-373ENST00000641983 6772 ntBASIC3.65□□□□□ -1.82
PCDHGA4Q9Y5G9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.65□□□□□ -1.82
PCDHGA4Q9Y5G9 SNORD30.1-201ENST00000391309 70 ntBASIC3.65□□□□□ -1.83
PCDHGA4Q9Y5G9 NDUFB9P3-201ENST00000521269 501 ntBASIC3.65□□□□□ -1.83
PCDHGA4Q9Y5G9 AC022695.1-201ENST00000522089 237 ntBASIC3.65□□□□□ -1.83
PCDHGA4Q9Y5G9 RPL12P50-201ENST00000603116 116 ntBASIC3.65□□□□□ -1.83
PCDHGA4Q9Y5G9 AL137849.1-201ENST00000604767 169 ntBASIC3.65□□□□□ -1.83
PCDHGA4Q9Y5G9 MIR7975-201ENST00000619350 68 ntBASIC3.65□□□□□ -1.83
PCDHGA4Q9Y5G9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGA4Q9Y5G9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PCDHGA4Q9Y5G9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHGA4Q9Y5G9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
PCDHGA4Q9Y5G9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
PCDHGA4Q9Y5G9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA4Q9Y5G9 RNU5F-1-201ENST00000362507 117 ntBASIC3.64□□□□□ -1.83
PCDHGA4Q9Y5G9 RNU6-800P-201ENST00000384473 103 ntBASIC3.64□□□□□ -1.83
PCDHGA4Q9Y5G9 RNVU1-14-201ENST00000384770 164 ntBASIC3.64□□□□□ -1.83
PCDHGA4Q9Y5G9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PCDHGA4Q9Y5G9 Y_RNA.648-201ENST00000459455 110 ntBASIC3.64□□□□□ -1.83
PCDHGA4Q9Y5G9 AC133485.1-201ENST00000567176 124 ntBASIC3.64□□□□□ -1.83
PCDHGA4Q9Y5G9 MIR3922-201ENST00000585192 84 ntBASIC3.64□□□□□ -1.83
PCDHGA4Q9Y5G9 AC005786.1-201ENST00000588553 154 ntBASIC3.64□□□□□ -1.83
PCDHGA4Q9Y5G9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA4Q9Y5G9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA4Q9Y5G9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA4Q9Y5G9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PCDHGA4Q9Y5G9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDHGA4Q9Y5G9 RNU6-805P-201ENST00000365643 106 ntBASIC3.63□□□□□ -1.83
PCDHGA4Q9Y5G9 MIR635-201ENST00000384830 98 ntBASIC3.63□□□□□ -1.83
PCDHGA4Q9Y5G9 MIR634-201ENST00000385208 97 ntBASIC3.63□□□□□ -1.83
PCDHGA4Q9Y5G9 RNU6-587P-201ENST00000391282 106 ntBASIC3.63□□□□□ -1.83
PCDHGA4Q9Y5G9 RNA5SP208-201ENST00000516156 78 ntBASIC3.63□□□□□ -1.83
PCDHGA4Q9Y5G9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA4Q9Y5G9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PCDHGA4Q9Y5G9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA4Q9Y5G9 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA4Q9Y5G9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGA4Q9Y5G9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
PCDHGA4Q9Y5G9 RNU6-811P-201ENST00000384069 107 ntBASIC3.62□□□□□ -1.83
PCDHGA4Q9Y5G9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PCDHGA4Q9Y5G9 RNU6-220P-201ENST00000390919 107 ntBASIC3.62□□□□□ -1.83
PCDHGA4Q9Y5G9 RPL23AP6-201ENST00000446637 472 ntBASIC3.62□□□□□ -1.83
PCDHGA4Q9Y5G9 BX510359.1-201ENST00000456973 237 ntBASIC3.62□□□□□ -1.83
PCDHGA4Q9Y5G9 MIR5187-201ENST00000583479 76 ntBASIC3.62□□□□□ -1.83
PCDHGA4Q9Y5G9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDHGA4Q9Y5G9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGA4Q9Y5G9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGA4Q9Y5G9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHGA4Q9Y5G9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGA4Q9Y5G9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA4Q9Y5G9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA4Q9Y5G9 Y_RNA.264-201ENST00000364665 102 ntBASIC3.61□□□□□ -1.83
PCDHGA4Q9Y5G9 RNY1P13-201ENST00000365030 105 ntBASIC3.61□□□□□ -1.83
PCDHGA4Q9Y5G9 RNU6-1031P-201ENST00000384773 107 ntBASIC3.61□□□□□ -1.83
PCDHGA4Q9Y5G9 MIR218-2-201ENST00000385006 110 ntBASIC3.61□□□□□ -1.83
PCDHGA4Q9Y5G9 SNORD77.2-201ENST00000391045 68 ntBASIC3.61□□□□□ -1.83
PCDHGA4Q9Y5G9 RN7SL442P-201ENST00000473804 320 ntBASIC3.61□□□□□ -1.83
PCDHGA4Q9Y5G9 TRBV12-2-201ENST00000489763 344 ntBASIC3.61□□□□□ -1.83
PCDHGA4Q9Y5G9 RN7SKP132-201ENST00000516001 208 ntBASIC3.61□□□□□ -1.83
PCDHGA4Q9Y5G9 U6.111-201ENST00000636093 83 ntBASIC3.61□□□□□ -1.83
PCDHGA4Q9Y5G9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
PCDHGA4Q9Y5G9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 CD24P4-201ENST00000382840 243 ntBASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 RNU6-471P-201ENST00000383944 106 ntBASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 RNU6-296P-201ENST00000384608 107 ntBASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 RNU6-540P-201ENST00000384622 101 ntBASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 RNU6-1237P-201ENST00000384777 107 ntBASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 RNU1-101P-201ENST00000391171 127 ntBASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 RNU4-83P-201ENST00000410863 133 ntBASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 SNORA59A-201ENST00000459326 152 ntBASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 RNA5SP385-201ENST00000515947 110 ntBASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 CYP3A52P-201ENST00000563326 91 ntBASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 MAPK10-322ENST00000641485 4530 ntBASIC3.6□□□□□ -1.83
PCDHGA4Q9Y5G9 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGA4Q9Y5G9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHGA4Q9Y5G9 MIR526A1-201ENST00000384897 85 ntBASIC3.59□□□□□ -1.83
PCDHGA4Q9Y5G9 RNA5SP424-201ENST00000390988 115 ntBASIC3.59□□□□□ -1.83
PCDHGA4Q9Y5G9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGA4Q9Y5G9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGA4Q9Y5G9 MIR4738-201ENST00000579134 87 ntBASIC3.59□□□□□ -1.83
PCDHGA4Q9Y5G9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.59□□□□□ -1.84
PCDHGA4Q9Y5G9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
PCDHGA4Q9Y5G9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.59□□□□□ -1.84
PCDHGA4Q9Y5G9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHGA4Q9Y5G9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA4Q9Y5G9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDHGA4Q9Y5G9 AC093908.1-201ENST00000623125 8092 ntBASIC3.58□□□□□ -1.84
PCDHGA4Q9Y5G9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 219.3 ms