Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RNU6-365P-201ENST00000517113 106 ntBASIC2.02□□□□□ -2.09
PCDHB1Q9Y5F3 AC007751.1-201ENST00000529260 376 ntBASIC2.02□□□□□ -2.09
PCDHB1Q9Y5F3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.02□□□□□ -2.09
PCDHB1Q9Y5F3 AC022254.1-201ENST00000567857 235 ntBASIC2.02□□□□□ -2.09
PCDHB1Q9Y5F3 MIR4299-201ENST00000577899 72 ntBASIC2.02□□□□□ -2.09
PCDHB1Q9Y5F3 AC002984.1-201ENST00000591692 448 ntBASIC2.02□□□□□ -2.09
PCDHB1Q9Y5F3 AC011603.4-201ENST00000611325 277 ntBASIC2.02□□□□□ -2.09
PCDHB1Q9Y5F3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 RNU6-661P-201ENST00000362409 107 ntBASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 U8.1-201ENST00000362843 134 ntBASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 Y_RNA.66-201ENST00000362862 102 ntBASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 RNU6-833P-201ENST00000363486 107 ntBASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 U8.16-201ENST00000391279 133 ntBASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 RNU7-107P-201ENST00000459121 61 ntBASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 RNA5SP233-201ENST00000459153 113 ntBASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 AC079804.2-201ENST00000490376 200 ntBASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 RNU7-12P-201ENST00000516030 62 ntBASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 RNU2-60P-201ENST00000517290 128 ntBASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 AP001328.1-201ENST00000528550 176 ntBASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 AC097639.2-201ENST00000603159 172 ntBASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.01□□□□□ -2.09
PCDHB1Q9Y5F3 MIR424-201ENST00000362227 98 ntBASIC2□□□□□ -2.09
PCDHB1Q9Y5F3 Y_RNA.127-201ENST00000363386 109 ntBASIC2□□□□□ -2.09
PCDHB1Q9Y5F3 RNA5SP160-201ENST00000364866 120 ntBASIC2□□□□□ -2.09
PCDHB1Q9Y5F3 SNORA1-201ENST00000384107 130 ntBASIC2□□□□□ -2.09
PCDHB1Q9Y5F3 MIR583-201ENST00000384846 75 ntBASIC2□□□□□ -2.09
PCDHB1Q9Y5F3 MIR660-201ENST00000385235 97 ntBASIC2□□□□□ -2.09
PCDHB1Q9Y5F3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2□□□□□ -2.09
PCDHB1Q9Y5F3 MIR891A-201ENST00000401237 79 ntBASIC2□□□□□ -2.09
PCDHB1Q9Y5F3 AC114811.1-201ENST00000507207 168 ntBASIC2□□□□□ -2.09
PCDHB1Q9Y5F3 RNU6-504P-201ENST00000516568 104 ntBASIC2□□□□□ -2.09
PCDHB1Q9Y5F3 AC090142.3-201ENST00000519012 385 ntBASIC2□□□□□ -2.09
PCDHB1Q9Y5F3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PCDHB1Q9Y5F3 MTND5P32-201ENST00000560711 1802 ntBASIC2□□□□□ -2.09
PCDHB1Q9Y5F3 AL391516.1-201ENST00000554380 2449 ntBASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 ZNF355P-201ENST00000427301 3216 ntBASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 RNU6-235P-201ENST00000362644 107 ntBASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 SNORD116-14-201ENST00000383894 92 ntBASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 SNORD116-17-201ENST00000383929 92 ntBASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 SNORD116-15-201ENST00000384445 92 ntBASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 SNORD116-19-201ENST00000384729 92 ntBASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 Y_RNA.584-201ENST00000391090 114 ntBASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 JTBP1-201ENST00000441314 247 ntBASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 AC099513.1-201ENST00000490423 301 ntBASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 Y_RNA.666-201ENST00000516187 112 ntBASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 RNU6-1270P-201ENST00000517128 108 ntBASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 AL627230.6-201ENST00000611129 280 ntBASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.99□□□□□ -2.09
PCDHB1Q9Y5F3 SNORA25.7-201ENST00000364375 127 ntBASIC1.98□□□□□ -2.09
PCDHB1Q9Y5F3 SNORD61-201ENST00000384252 73 ntBASIC1.98□□□□□ -2.09
PCDHB1Q9Y5F3 MIR548A2-201ENST00000384956 97 ntBASIC1.98□□□□□ -2.09
PCDHB1Q9Y5F3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
PCDHB1Q9Y5F3 AC008267.6-201ENST00000441664 139 ntBASIC1.98□□□□□ -2.09
PCDHB1Q9Y5F3 AC108729.3-201ENST00000513484 108 ntBASIC1.98□□□□□ -2.09
PCDHB1Q9Y5F3 MIR3129-201ENST00000581095 76 ntBASIC1.98□□□□□ -2.09
PCDHB1Q9Y5F3 AC006441.5-201ENST00000612680 209 ntBASIC1.98□□□□□ -2.09
PCDHB1Q9Y5F3 AP001340.1-201ENST00000624405 217 ntBASIC1.98□□□□□ -2.09
PCDHB1Q9Y5F3 SNORD3E-202ENST00000627253 216 ntBASIC1.98□□□□□ -2.09
PCDHB1Q9Y5F3 RNA5SP205-201ENST00000364653 136 ntBASIC1.97□□□□□ -2.09
PCDHB1Q9Y5F3 SNORD38C-201ENST00000384381 69 ntBASIC1.97□□□□□ -2.09
PCDHB1Q9Y5F3 AC004965.1-201ENST00000413033 213 ntBASIC1.97□□□□□ -2.09
PCDHB1Q9Y5F3 SNORA44.1-201ENST00000517031 108 ntBASIC1.97□□□□□ -2.09
PCDHB1Q9Y5F3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.97□□□□□ -2.09
PCDHB1Q9Y5F3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.97□□□□□ -2.09
PCDHB1Q9Y5F3 TUG1_4.1-201ENST00000619464 181 ntBASIC1.97□□□□□ -2.09
PCDHB1Q9Y5F3 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
PCDHB1Q9Y5F3 SNORD24-201ENST00000383884 75 ntBASIC1.96□□□□□ -2.1
PCDHB1Q9Y5F3 RNU4-52P-201ENST00000384209 138 ntBASIC1.96□□□□□ -2.1
PCDHB1Q9Y5F3 MIR194-1-201ENST00000384892 85 ntBASIC1.96□□□□□ -2.1
PCDHB1Q9Y5F3 SNORA40.18-201ENST00000391200 128 ntBASIC1.96□□□□□ -2.1
PCDHB1Q9Y5F3 AC108667.1-201ENST00000428618 249 ntBASIC1.96□□□□□ -2.1
PCDHB1Q9Y5F3 MIR4498-201ENST00000577599 66 ntBASIC1.96□□□□□ -2.1
PCDHB1Q9Y5F3 U7.2-201ENST00000607576 63 ntBASIC1.96□□□□□ -2.1
PCDHB1Q9Y5F3 MIR8074-201ENST00000615081 81 ntBASIC1.96□□□□□ -2.1
PCDHB1Q9Y5F3 MIR376A2-201ENST00000636782 80 ntBASIC1.96□□□□□ -2.1
PCDHB1Q9Y5F3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PCDHB1Q9Y5F3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
PCDHB1Q9Y5F3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 Y_RNA.52-201ENST00000362760 96 ntBASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 RNU6-309P-201ENST00000364573 106 ntBASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 RNA5SP138-201ENST00000365098 114 ntBASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 MIR539-201ENST00000365690 78 ntBASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 RNU6-80P-201ENST00000384195 107 ntBASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 MIR452-201ENST00000385020 85 ntBASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 MIR676-201ENST00000390702 67 ntBASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 AC019129.1-201ENST00000403786 261 ntBASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 MIR1267-201ENST00000408723 78 ntBASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 RNA5SP338-201ENST00000410495 85 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 252.6 ms