Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 SEPT14P3-201ENST00000439401 183 ntBASIC-0.68□□□□□ -2.52
SCN8AQ9UQD0 AL732372.2-207ENST00000445840 183 ntBASIC-0.68□□□□□ -2.52
SCN8AQ9UQD0 SEPT14P2-201ENST00000453405 183 ntBASIC-0.68□□□□□ -2.52
SCN8AQ9UQD0 AC107297.1-201ENST00000459991 176 ntBASIC-0.68□□□□□ -2.52
SCN8AQ9UQD0 AC026782.1-201ENST00000512952 449 ntBASIC-0.68□□□□□ -2.52
SCN8AQ9UQD0 SEPT14P4-201ENST00000513445 186 ntBASIC-0.68□□□□□ -2.52
SCN8AQ9UQD0 FO082796.1-201ENST00000523795 183 ntBASIC-0.68□□□□□ -2.52
SCN8AQ9UQD0 AP003072.1-201ENST00000531740 145 ntBASIC-0.68□□□□□ -2.52
SCN8AQ9UQD0 MIR4491-201ENST00000581087 68 ntBASIC-0.68□□□□□ -2.52
SCN8AQ9UQD0 AC124312.5-201ENST00000604451 268 ntBASIC-0.68□□□□□ -2.52
SCN8AQ9UQD0 MIR30D-201ENST00000362283 70 ntBASIC-0.69□□□□□ -2.52
SCN8AQ9UQD0 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.69□□□□□ -2.52
SCN8AQ9UQD0 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.69□□□□□ -2.52
SCN8AQ9UQD0 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.69□□□□□ -2.52
SCN8AQ9UQD0 FCF1P4-201ENST00000448326 183 ntBASIC-0.69□□□□□ -2.52
SCN8AQ9UQD0 AC109327.2-201ENST00000448339 378 ntBASIC-0.69□□□□□ -2.52
SCN8AQ9UQD0 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.69□□□□□ -2.52
SCN8AQ9UQD0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.69□□□□□ -2.52
SCN8AQ9UQD0 AC022140.2-201ENST00000623500 188 ntBASIC-0.69□□□□□ -2.52
SCN8AQ9UQD0 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 AL603910.2-201ENST00000407268 136 ntBASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 AC087499.4-201ENST00000448505 178 ntBASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 AC114755.3-201ENST00000481111 251 ntBASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 RPS29P24-201ENST00000486345 171 ntBASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 RNU7-25P-201ENST00000516544 62 ntBASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 MIR4436A-201ENST00000585278 85 ntBASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 RNU4-55P-201ENST00000410731 137 ntBASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 RNU7-115P-201ENST00000516433 55 ntBASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 RNU6-566P-201ENST00000516790 107 ntBASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 RNY1P9-201ENST00000532431 109 ntBASIC-0.7□□□□□ -2.52
SCN8AQ9UQD0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.71□□□□□ -2.52
SCN8AQ9UQD0 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.71□□□□□ -2.52
SCN8AQ9UQD0 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.71□□□□□ -2.52
SCN8AQ9UQD0 SNORA27-201ENST00000384323 126 ntBASIC-0.71□□□□□ -2.52
SCN8AQ9UQD0 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.71□□□□□ -2.52
SCN8AQ9UQD0 MIR1468-201ENST00000410600 86 ntBASIC-0.71□□□□□ -2.52
SCN8AQ9UQD0 USP9YP30-201ENST00000430729 455 ntBASIC-0.71□□□□□ -2.52
SCN8AQ9UQD0 AL445567.1-201ENST00000439121 144 ntBASIC-0.71□□□□□ -2.52
SCN8AQ9UQD0 AC091951.2-201ENST00000500762 203 ntBASIC-0.71□□□□□ -2.52
SCN8AQ9UQD0 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.71□□□□□ -2.52
SCN8AQ9UQD0 AC127455.1-201ENST00000565496 145 ntBASIC-0.71□□□□□ -2.52
SCN8AQ9UQD0 AC092794.2-201ENST00000620933 563 ntBASIC-0.71□□□□□ -2.52
SCN8AQ9UQD0 AC124864.2-201ENST00000624736 186 ntBASIC-0.71□□□□□ -2.52
SCN8AQ9UQD0 MIR4788-201ENST00000639104 80 ntBASIC-0.71□□□□□ -2.52
SCN8AQ9UQD0 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.72□□□□□ -2.52
SCN8AQ9UQD0 RNU6-811P-201ENST00000384069 107 ntBASIC-0.72□□□□□ -2.52
SCN8AQ9UQD0 AC024405.2-202ENST00000532731 184 ntBASIC-0.72□□□□□ -2.52
SCN8AQ9UQD0 AC138749.4-201ENST00000563970 127 ntBASIC-0.72□□□□□ -2.52
SCN8AQ9UQD0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.72□□□□□ -2.52
SCN8AQ9UQD0 AC060780.3-201ENST00000589464 80 ntBASIC-0.72□□□□□ -2.52
SCN8AQ9UQD0 AC087752.4-201ENST00000605911 462 ntBASIC-0.72□□□□□ -2.52
SCN8AQ9UQD0 SNORD116-11-201ENST00000383882 92 ntBASIC-0.72□□□□□ -2.53
SCN8AQ9UQD0 SNORD72-201ENST00000390994 80 ntBASIC-0.72□□□□□ -2.53
SCN8AQ9UQD0 MIR548L-201ENST00000408303 86 ntBASIC-0.72□□□□□ -2.53
SCN8AQ9UQD0 RNU7-149P-201ENST00000516739 59 ntBASIC-0.72□□□□□ -2.53
SCN8AQ9UQD0 AC005014.3-201ENST00000605985 190 ntBASIC-0.72□□□□□ -2.53
SCN8AQ9UQD0 U7.6-201ENST00000610841 64 ntBASIC-0.72□□□□□ -2.53
SCN8AQ9UQD0 MIR6082-201ENST00000613604 109 ntBASIC-0.72□□□□□ -2.53
SCN8AQ9UQD0 AL596211.1-201ENST00000569873 2277 ntBASIC-0.72□□□□□ -2.53
SCN8AQ9UQD0 SNORD115-28-201ENST00000363931 81 ntBASIC-0.73□□□□□ -2.53
SCN8AQ9UQD0 RNU4-75P-201ENST00000364621 146 ntBASIC-0.73□□□□□ -2.53
SCN8AQ9UQD0 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.73□□□□□ -2.53
SCN8AQ9UQD0 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.73□□□□□ -2.53
SCN8AQ9UQD0 RNU7-87P-201ENST00000459343 62 ntBASIC-0.73□□□□□ -2.53
SCN8AQ9UQD0 AC011352.1-201ENST00000512300 793 ntBASIC-0.73□□□□□ -2.53
SCN8AQ9UQD0 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.73□□□□□ -2.53
SCN8AQ9UQD0 RNU6-702P-201ENST00000364982 107 ntBASIC-0.74□□□□□ -2.53
SCN8AQ9UQD0 MIR190B-201ENST00000401119 79 ntBASIC-0.74□□□□□ -2.53
SCN8AQ9UQD0 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.74□□□□□ -2.53
SCN8AQ9UQD0 RNU6-998P-201ENST00000515894 101 ntBASIC-0.74□□□□□ -2.53
SCN8AQ9UQD0 RNU6-911P-201ENST00000516523 104 ntBASIC-0.74□□□□□ -2.53
SCN8AQ9UQD0 AC060788.1-201ENST00000521318 469 ntBASIC-0.74□□□□□ -2.53
SCN8AQ9UQD0 AC063944.3-201ENST00000609969 533 ntBASIC-0.74□□□□□ -2.53
SCN8AQ9UQD0 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.74□□□□□ -2.53
SCN8AQ9UQD0 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.74□□□□□ -2.53
SCN8AQ9UQD0 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.74□□□□□ -2.53
SCN8AQ9UQD0 SNORD115-47-201ENST00000391226 86 ntBASIC-0.74□□□□□ -2.53
SCN8AQ9UQD0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.74□□□□□ -2.53
SCN8AQ9UQD0 SNORD57-201ENST00000448188 72 ntBASIC-0.74□□□□□ -2.53
SCN8AQ9UQD0 CHEK2P4-201ENST00000450340 246 ntBASIC-0.74□□□□□ -2.53
SCN8AQ9UQD0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.74□□□□□ -2.53
SCN8AQ9UQD0 MTATP6P24-201ENST00000576835 677 ntBASIC-0.74□□□□□ -2.53
SCN8AQ9UQD0 MIR198-201ENST00000637333 62 ntBASIC-0.74□□□□□ -2.53
SCN8AQ9UQD0 RNU6-403P-201ENST00000363163 104 ntBASIC-0.75□□□□□ -2.53
SCN8AQ9UQD0 RNU6-949P-201ENST00000384040 107 ntBASIC-0.75□□□□□ -2.53
SCN8AQ9UQD0 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.75□□□□□ -2.53
SCN8AQ9UQD0 RNU6-966P-201ENST00000516479 104 ntBASIC-0.75□□□□□ -2.53
SCN8AQ9UQD0 AL080274.1-201ENST00000605565 220 ntBASIC-0.75□□□□□ -2.53
SCN8AQ9UQD0 AL442067.1-201ENST00000613261 223 ntBASIC-0.75□□□□□ -2.53
SCN8AQ9UQD0 MIR6514-201ENST00000622549 70 ntBASIC-0.75□□□□□ -2.53
SCN8AQ9UQD0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms