Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDZRN3Q9UPQ7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
PDZRN3Q9UPQ7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.73□□□□□ -1.81
PDZRN3Q9UPQ7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
PDZRN3Q9UPQ7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PDZRN3Q9UPQ7 SNORD30.1-201ENST00000391309 70 ntBASIC3.72□□□□□ -1.81
PDZRN3Q9UPQ7 RNU7-96P-201ENST00000459535 64 ntBASIC3.72□□□□□ -1.81
PDZRN3Q9UPQ7 MIR4762-201ENST00000585261 75 ntBASIC3.72□□□□□ -1.81
PDZRN3Q9UPQ7 AC090517.3-201ENST00000625170 141 ntBASIC3.72□□□□□ -1.81
PDZRN3Q9UPQ7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 RNA5SP432-201ENST00000362480 116 ntBASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 SNORA63.2-201ENST00000362603 126 ntBASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 Y_RNA.494-201ENST00000384432 111 ntBASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 MIR1253-201ENST00000408273 105 ntBASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 RNU6-380P-201ENST00000410207 107 ntBASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 AC087499.2-201ENST00000432861 149 ntBASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 RPS15AP28-201ENST00000435088 386 ntBASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 AC108938.1-201ENST00000451204 136 ntBASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 RNU7-2P-201ENST00000516096 62 ntBASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDZRN3Q9UPQ7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
PDZRN3Q9UPQ7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDZRN3Q9UPQ7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDZRN3Q9UPQ7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDZRN3Q9UPQ7 SNORA1B-201ENST00000362535 133 ntBASIC3.7□□□□□ -1.82
PDZRN3Q9UPQ7 RNA5SP252-201ENST00000391131 119 ntBASIC3.7□□□□□ -1.82
PDZRN3Q9UPQ7 MIR548G-201ENST00000408442 89 ntBASIC3.7□□□□□ -1.82
PDZRN3Q9UPQ7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.7□□□□□ -1.82
PDZRN3Q9UPQ7 AC103810.6-201ENST00000606708 136 ntBASIC3.7□□□□□ -1.82
PDZRN3Q9UPQ7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.7□□□□□ -1.82
PDZRN3Q9UPQ7 MIR6841-201ENST00000637129 72 ntBASIC3.7□□□□□ -1.82
PDZRN3Q9UPQ7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDZRN3Q9UPQ7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
PDZRN3Q9UPQ7 GABRG2-229ENST00000641017 3628 ntBASIC3.7□□□□□ -1.82
PDZRN3Q9UPQ7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDZRN3Q9UPQ7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDZRN3Q9UPQ7 U8.5-201ENST00000364528 136 ntBASIC3.69□□□□□ -1.82
PDZRN3Q9UPQ7 SNORA32-201ENST00000384072 121 ntBASIC3.69□□□□□ -1.82
PDZRN3Q9UPQ7 RNU6-1319P-201ENST00000390855 104 ntBASIC3.69□□□□□ -1.82
PDZRN3Q9UPQ7 RNU6-747P-201ENST00000390928 104 ntBASIC3.69□□□□□ -1.82
PDZRN3Q9UPQ7 RNU6-241P-201ENST00000391148 104 ntBASIC3.69□□□□□ -1.82
PDZRN3Q9UPQ7 RNU6-177P-201ENST00000411257 104 ntBASIC3.69□□□□□ -1.82
PDZRN3Q9UPQ7 RPS29P28-201ENST00000446439 141 ntBASIC3.69□□□□□ -1.82
PDZRN3Q9UPQ7 AL049830.1-201ENST00000468034 425 ntBASIC3.69□□□□□ -1.82
PDZRN3Q9UPQ7 AC092185.1-201ENST00000491371 97 ntBASIC3.69□□□□□ -1.82
PDZRN3Q9UPQ7 AP000867.2-201ENST00000532468 320 ntBASIC3.69□□□□□ -1.82
PDZRN3Q9UPQ7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDZRN3Q9UPQ7 RNU6-1084P-201ENST00000362498 107 ntBASIC3.68□□□□□ -1.82
PDZRN3Q9UPQ7 SNORA22.1-201ENST00000362701 134 ntBASIC3.68□□□□□ -1.82
PDZRN3Q9UPQ7 SNORD68-201ENST00000363214 84 ntBASIC3.68□□□□□ -1.82
PDZRN3Q9UPQ7 snoU2-30.1-201ENST00000365012 70 ntBASIC3.68□□□□□ -1.82
PDZRN3Q9UPQ7 SNORA9.2-201ENST00000365361 133 ntBASIC3.68□□□□□ -1.82
PDZRN3Q9UPQ7 RNU6-1274P-201ENST00000384557 107 ntBASIC3.68□□□□□ -1.82
PDZRN3Q9UPQ7 RNU11-5P-201ENST00000391216 129 ntBASIC3.68□□□□□ -1.82
PDZRN3Q9UPQ7 RNU6-519P-201ENST00000410590 108 ntBASIC3.68□□□□□ -1.82
PDZRN3Q9UPQ7 HMGN2P34-201ENST00000437647 269 ntBASIC3.68□□□□□ -1.82
PDZRN3Q9UPQ7 snoU13.11-201ENST00000459219 104 ntBASIC3.68□□□□□ -1.82
PDZRN3Q9UPQ7 Y_RNA.681-201ENST00000516445 113 ntBASIC3.68□□□□□ -1.82
PDZRN3Q9UPQ7 SNORD45.4-201ENST00000516629 73 ntBASIC3.68□□□□□ -1.82
PDZRN3Q9UPQ7 MIR4484-201ENST00000582855 83 ntBASIC3.68□□□□□ -1.82
PDZRN3Q9UPQ7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDZRN3Q9UPQ7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PDZRN3Q9UPQ7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDZRN3Q9UPQ7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PDZRN3Q9UPQ7 Y_RNA.241-201ENST00000364470 117 ntBASIC3.67□□□□□ -1.82
PDZRN3Q9UPQ7 Y_RNA.336-201ENST00000365307 109 ntBASIC3.67□□□□□ -1.82
PDZRN3Q9UPQ7 MIR181B2-201ENST00000385004 89 ntBASIC3.67□□□□□ -1.82
PDZRN3Q9UPQ7 MIR9-1-201ENST00000385198 89 ntBASIC3.67□□□□□ -1.82
PDZRN3Q9UPQ7 RNU6-587P-201ENST00000391282 106 ntBASIC3.67□□□□□ -1.82
PDZRN3Q9UPQ7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.67□□□□□ -1.82
PDZRN3Q9UPQ7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.67□□□□□ -1.82
PDZRN3Q9UPQ7 snoU13.28-201ENST00000459235 104 ntBASIC3.67□□□□□ -1.82
PDZRN3Q9UPQ7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.67□□□□□ -1.82
PDZRN3Q9UPQ7 MIR664A-201ENST00000626086 82 ntBASIC3.67□□□□□ -1.82
PDZRN3Q9UPQ7 SNORD115-14-201ENST00000363090 81 ntBASIC3.66□□□□□ -1.82
PDZRN3Q9UPQ7 Y_RNA.173-201ENST00000363776 113 ntBASIC3.66□□□□□ -1.82
PDZRN3Q9UPQ7 RNA5SP508-201ENST00000411327 119 ntBASIC3.66□□□□□ -1.82
PDZRN3Q9UPQ7 HMGN2P18-201ENST00000450680 270 ntBASIC3.66□□□□□ -1.82
PDZRN3Q9UPQ7 RNU7-34P-201ENST00000459394 64 ntBASIC3.66□□□□□ -1.82
PDZRN3Q9UPQ7 RPPH1-2P-201ENST00000516688 293 ntBASIC3.66□□□□□ -1.82
PDZRN3Q9UPQ7 RNU6-90P-201ENST00000606352 106 ntBASIC3.66□□□□□ -1.82
PDZRN3Q9UPQ7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDZRN3Q9UPQ7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDZRN3Q9UPQ7 RNU6-161P-201ENST00000363051 106 ntBASIC3.65□□□□□ -1.83
PDZRN3Q9UPQ7 RNU6-198P-201ENST00000384258 104 ntBASIC3.65□□□□□ -1.83
PDZRN3Q9UPQ7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.65□□□□□ -1.83
PDZRN3Q9UPQ7 AC060773.1-201ENST00000421698 310 ntBASIC3.65□□□□□ -1.83
PDZRN3Q9UPQ7 AC104332.2-201ENST00000429959 156 ntBASIC3.65□□□□□ -1.83
PDZRN3Q9UPQ7 RNU6-856P-201ENST00000516959 98 ntBASIC3.65□□□□□ -1.83
PDZRN3Q9UPQ7 SNORA31.26-201ENST00000517250 137 ntBASIC3.65□□□□□ -1.83
PDZRN3Q9UPQ7 AC090821.2-201ENST00000523552 176 ntBASIC3.65□□□□□ -1.83
PDZRN3Q9UPQ7 AP002004.2-201ENST00000531656 154 ntBASIC3.65□□□□□ -1.83
PDZRN3Q9UPQ7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms