Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 SNORA9.2-201ENST00000365361 133 ntBASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 RNU1-52P-201ENST00000384190 164 ntBASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 RNA5SP100-201ENST00000410903 110 ntBASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 RNA5SP59-201ENST00000410922 110 ntBASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 RNA5SP450-201ENST00000411206 102 ntBASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 AC093850.1-201ENST00000454121 251 ntBASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 RPS29P29-201ENST00000456396 171 ntBASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 RNU2-13P-201ENST00000515909 113 ntBASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 RNA5SP356-201ENST00000515972 94 ntBASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 GTF3AP2-201ENST00000557014 266 ntBASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 AC022523.2-201ENST00000561045 150 ntBASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 MIR3152-201ENST00000579801 74 ntBASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.63□□□□□ -1.99
FOXD3Q9UJU5 AC092881.1-201ENST00000638218 2733 ntBASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 Y_RNA.299-201ENST00000364973 94 ntBASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 Y_RNA.344-201ENST00000365381 112 ntBASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 RNU6-1067P-201ENST00000384752 107 ntBASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 RNU6-1319P-201ENST00000390855 104 ntBASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 RNU6-747P-201ENST00000390928 104 ntBASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 RNU6-360P-201ENST00000390944 104 ntBASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 RNU6-241P-201ENST00000391148 104 ntBASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 RNA5SP184-201ENST00000411071 108 ntBASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 RNU6-177P-201ENST00000411257 104 ntBASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 SUMO1P4-201ENST00000429430 302 ntBASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 AL135938.1-201ENST00000443141 297 ntBASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 RN7SL499P-201ENST00000481141 276 ntBASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 SNORA31.4-201ENST00000516049 129 ntBASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 MIR3124-201ENST00000582636 67 ntBASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 AL033523.1-201ENST00000605153 153 ntBASIC2.62□□□□□ -1.99
FOXD3Q9UJU5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
FOXD3Q9UJU5 Y_RNA.78-201ENST00000362970 110 ntBASIC2.61□□□□□ -1.99
FOXD3Q9UJU5 Y_RNA.544-201ENST00000384650 113 ntBASIC2.61□□□□□ -1.99
FOXD3Q9UJU5 MIR1912-201ENST00000410389 80 ntBASIC2.61□□□□□ -1.99
FOXD3Q9UJU5 SNORD123-201ENST00000459473 70 ntBASIC2.61□□□□□ -1.99
FOXD3Q9UJU5 RPS23P4-201ENST00000487908 423 ntBASIC2.61□□□□□ -1.99
FOXD3Q9UJU5 AC004812.1-201ENST00000540773 146 ntBASIC2.61□□□□□ -1.99
FOXD3Q9UJU5 MIR4672-201ENST00000583126 81 ntBASIC2.61□□□□□ -1.99
FOXD3Q9UJU5 AC006254.2-201ENST00000603259 279 ntBASIC2.61□□□□□ -1.99
FOXD3Q9UJU5 AL162726.3-218ENST00000636401 95 ntBASIC2.61□□□□□ -1.99
FOXD3Q9UJU5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.61□□□□□ -1.99
FOXD3Q9UJU5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.6□□□□□ -1.99
FOXD3Q9UJU5 SNORA3A-201ENST00000364113 130 ntBASIC2.6□□□□□ -1.99
FOXD3Q9UJU5 Y_RNA.531-201ENST00000384589 121 ntBASIC2.6□□□□□ -1.99
FOXD3Q9UJU5 MIR526A1-201ENST00000384897 85 ntBASIC2.6□□□□□ -1.99
FOXD3Q9UJU5 POLR2J4-204ENST00000418424 324 ntBASIC2.6□□□□□ -1.99
FOXD3Q9UJU5 RNU7-73P-201ENST00000458743 63 ntBASIC2.6□□□□□ -1.99
FOXD3Q9UJU5 RNU7-67P-201ENST00000459003 62 ntBASIC2.6□□□□□ -1.99
FOXD3Q9UJU5 DNAJC19P9-201ENST00000555084 351 ntBASIC2.6□□□□□ -1.99
FOXD3Q9UJU5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
FOXD3Q9UJU5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
FOXD3Q9UJU5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
FOXD3Q9UJU5 RNU6-1123P-201ENST00000362347 106 ntBASIC2.59□□□□□ -1.99
FOXD3Q9UJU5 RNU6-661P-201ENST00000362409 107 ntBASIC2.59□□□□□ -1.99
FOXD3Q9UJU5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.59□□□□□ -1.99
FOXD3Q9UJU5 RNU7-6P-201ENST00000516845 62 ntBASIC2.59□□□□□ -1.99
FOXD3Q9UJU5 AP001318.4-201ENST00000616637 121 ntBASIC2.59□□□□□ -1.99
FOXD3Q9UJU5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
FOXD3Q9UJU5 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.59□□□□□ -2
FOXD3Q9UJU5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
FOXD3Q9UJU5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.58□□□□□ -2
FOXD3Q9UJU5 Y_RNA.348-201ENST00000365403 103 ntBASIC2.58□□□□□ -2
FOXD3Q9UJU5 Y_RNA.537-201ENST00000384626 109 ntBASIC2.58□□□□□ -2
FOXD3Q9UJU5 RN7SKP192-201ENST00000411291 327 ntBASIC2.58□□□□□ -2
FOXD3Q9UJU5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.58□□□□□ -2
FOXD3Q9UJU5 AC087499.2-201ENST00000432861 149 ntBASIC2.58□□□□□ -2
FOXD3Q9UJU5 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.58□□□□□ -2
FOXD3Q9UJU5 RNU7-193P-201ENST00000516723 65 ntBASIC2.58□□□□□ -2
FOXD3Q9UJU5 MIR548AR-201ENST00000582191 57 ntBASIC2.58□□□□□ -2
FOXD3Q9UJU5 Y_RNA.818-201ENST00000618813 71 ntBASIC2.58□□□□□ -2
FOXD3Q9UJU5 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.58□□□□□ -2
FOXD3Q9UJU5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.57□□□□□ -2
FOXD3Q9UJU5 SNORD115-2-201ENST00000362842 82 ntBASIC2.57□□□□□ -2
FOXD3Q9UJU5 SNORD115-19-201ENST00000363098 82 ntBASIC2.57□□□□□ -2
FOXD3Q9UJU5 SNORD115-18-201ENST00000363293 82 ntBASIC2.57□□□□□ -2
FOXD3Q9UJU5 SNORD115-17-201ENST00000364612 82 ntBASIC2.57□□□□□ -2
FOXD3Q9UJU5 SNORD115-20-201ENST00000365099 82 ntBASIC2.57□□□□□ -2
FOXD3Q9UJU5 Y_RNA.369-201ENST00000365568 117 ntBASIC2.57□□□□□ -2
FOXD3Q9UJU5 Y_RNA.430-201ENST00000384081 110 ntBASIC2.57□□□□□ -2
FOXD3Q9UJU5 RNU1-138P-201ENST00000384093 164 ntBASIC2.57□□□□□ -2
FOXD3Q9UJU5 AL512326.2-201ENST00000426359 151 ntBASIC2.57□□□□□ -2
FOXD3Q9UJU5 AP004217.1-201ENST00000480579 346 ntBASIC2.57□□□□□ -2
FOXD3Q9UJU5 SNORA31.17-201ENST00000516953 127 ntBASIC2.57□□□□□ -2
FOXD3Q9UJU5 RNU6-958P-201ENST00000516995 106 ntBASIC2.57□□□□□ -2
FOXD3Q9UJU5 AC243994.1-201ENST00000618627 109 ntBASIC2.57□□□□□ -2
FOXD3Q9UJU5 MIR6733-201ENST00000635723 61 ntBASIC2.57□□□□□ -2
FOXD3Q9UJU5 MIR6841-201ENST00000637129 72 ntBASIC2.57□□□□□ -2
FOXD3Q9UJU5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
FOXD3Q9UJU5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.56□□□□□ -2
FOXD3Q9UJU5 RPL39P25-201ENST00000449384 154 ntBASIC2.56□□□□□ -2
FOXD3Q9UJU5 RNU7-113P-201ENST00000459273 62 ntBASIC2.56□□□□□ -2
FOXD3Q9UJU5 RN7SL429P-201ENST00000479090 223 ntBASIC2.56□□□□□ -2
FOXD3Q9UJU5 RN7SL489P-201ENST00000486185 223 ntBASIC2.56□□□□□ -2
FOXD3Q9UJU5 RN7SL327P-201ENST00000488659 223 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 241.1 ms