Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NXF1Q9UBU9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.29□□□□□ -1.88
NXF1Q9UBU9 MIR422A-201ENST00000362286 90 ntBASIC3.29□□□□□ -1.88
NXF1Q9UBU9 RN7SKP192-201ENST00000411291 327 ntBASIC3.29□□□□□ -1.88
NXF1Q9UBU9 SNORD4B-201ENST00000459083 72 ntBASIC3.29□□□□□ -1.88
NXF1Q9UBU9 RNU6-1041P-201ENST00000516254 102 ntBASIC3.29□□□□□ -1.88
NXF1Q9UBU9 RNU6-1108P-201ENST00000516308 104 ntBASIC3.29□□□□□ -1.88
NXF1Q9UBU9 RNU7-181P-201ENST00000517234 74 ntBASIC3.29□□□□□ -1.88
NXF1Q9UBU9 IGLV3-17-201ENST00000519099 244 ntBASIC3.29□□□□□ -1.88
NXF1Q9UBU9 MIR4765-201ENST00000585007 77 ntBASIC3.29□□□□□ -1.88
NXF1Q9UBU9 AC012676.2-201ENST00000619258 186 ntBASIC3.29□□□□□ -1.88
NXF1Q9UBU9 MIR338-201ENST00000636369 67 ntBASIC3.29□□□□□ -1.88
NXF1Q9UBU9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.29□□□□□ -1.88
NXF1Q9UBU9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
NXF1Q9UBU9 MIR22-201ENST00000362190 85 ntBASIC3.28□□□□□ -1.88
NXF1Q9UBU9 Y_RNA.332-201ENST00000365271 113 ntBASIC3.28□□□□□ -1.88
NXF1Q9UBU9 SNORA54-201ENST00000384281 123 ntBASIC3.28□□□□□ -1.88
NXF1Q9UBU9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.28□□□□□ -1.88
NXF1Q9UBU9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.28□□□□□ -1.88
NXF1Q9UBU9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.28□□□□□ -1.88
NXF1Q9UBU9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NXF1Q9UBU9 RNU6-480P-201ENST00000384332 107 ntBASIC3.27□□□□□ -1.89
NXF1Q9UBU9 RNU6-587P-201ENST00000391282 106 ntBASIC3.27□□□□□ -1.89
NXF1Q9UBU9 MIR1267-201ENST00000408723 78 ntBASIC3.27□□□□□ -1.89
NXF1Q9UBU9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.27□□□□□ -1.89
NXF1Q9UBU9 RN7SL20P-201ENST00000488827 297 ntBASIC3.27□□□□□ -1.89
NXF1Q9UBU9 RNA5SP380-201ENST00000517190 98 ntBASIC3.27□□□□□ -1.89
NXF1Q9UBU9 FAM106DP-201ENST00000586416 501 ntBASIC3.27□□□□□ -1.89
NXF1Q9UBU9 CTSLP2-204ENST00000629029 392 ntBASIC3.27□□□□□ -1.89
NXF1Q9UBU9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NXF1Q9UBU9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NXF1Q9UBU9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
NXF1Q9UBU9 AL353746.1-201ENST00000566293 6881 ntBASIC3.26□□□□□ -1.89
NXF1Q9UBU9 SNORA71.1-201ENST00000364523 117 ntBASIC3.26□□□□□ -1.89
NXF1Q9UBU9 Y_RNA.448-201ENST00000384185 108 ntBASIC3.26□□□□□ -1.89
NXF1Q9UBU9 SNORA2B-201ENST00000384583 137 ntBASIC3.26□□□□□ -1.89
NXF1Q9UBU9 RN7SKP220-201ENST00000410611 288 ntBASIC3.26□□□□□ -1.89
NXF1Q9UBU9 RNU6-1190P-201ENST00000410811 104 ntBASIC3.26□□□□□ -1.89
NXF1Q9UBU9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.26□□□□□ -1.89
NXF1Q9UBU9 HMGN2P16-201ENST00000456802 261 ntBASIC3.26□□□□□ -1.89
NXF1Q9UBU9 RNU7-94P-201ENST00000459576 63 ntBASIC3.26□□□□□ -1.89
NXF1Q9UBU9 AC092185.1-201ENST00000491371 97 ntBASIC3.26□□□□□ -1.89
NXF1Q9UBU9 RNU6-237P-201ENST00000515985 71 ntBASIC3.26□□□□□ -1.89
NXF1Q9UBU9 MIR6076-201ENST00000617521 113 ntBASIC3.26□□□□□ -1.89
NXF1Q9UBU9 MIR6717-201ENST00000622747 73 ntBASIC3.26□□□□□ -1.89
NXF1Q9UBU9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NXF1Q9UBU9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NXF1Q9UBU9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
NXF1Q9UBU9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
NXF1Q9UBU9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NXF1Q9UBU9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NXF1Q9UBU9 RNU5F-1-201ENST00000362507 117 ntBASIC3.25□□□□□ -1.89
NXF1Q9UBU9 RNU6-865P-201ENST00000364772 107 ntBASIC3.25□□□□□ -1.89
NXF1Q9UBU9 RNA5SP138-201ENST00000365098 114 ntBASIC3.25□□□□□ -1.89
NXF1Q9UBU9 Y_RNA.508-201ENST00000384502 114 ntBASIC3.25□□□□□ -1.89
NXF1Q9UBU9 SNORA8-201ENST00000384574 139 ntBASIC3.25□□□□□ -1.89
NXF1Q9UBU9 MIR635-201ENST00000384830 98 ntBASIC3.25□□□□□ -1.89
NXF1Q9UBU9 RNA5SP323-201ENST00000391094 133 ntBASIC3.25□□□□□ -1.89
NXF1Q9UBU9 MIR1261-201ENST00000408659 82 ntBASIC3.25□□□□□ -1.89
NXF1Q9UBU9 RNU2-63P-201ENST00000410792 194 ntBASIC3.25□□□□□ -1.89
NXF1Q9UBU9 RNA5SP112-201ENST00000515937 99 ntBASIC3.25□□□□□ -1.89
NXF1Q9UBU9 RNU6-991P-201ENST00000516168 107 ntBASIC3.25□□□□□ -1.89
NXF1Q9UBU9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.25□□□□□ -1.89
NXF1Q9UBU9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
NXF1Q9UBU9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
NXF1Q9UBU9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NXF1Q9UBU9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.24□□□□□ -1.89
NXF1Q9UBU9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NXF1Q9UBU9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NXF1Q9UBU9 RNA5SP133-201ENST00000363368 119 ntBASIC3.24□□□□□ -1.89
NXF1Q9UBU9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.24□□□□□ -1.89
NXF1Q9UBU9 AC022018.1-201ENST00000430685 241 ntBASIC3.24□□□□□ -1.89
NXF1Q9UBU9 AC009969.1-201ENST00000438726 172 ntBASIC3.24□□□□□ -1.89
NXF1Q9UBU9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.24□□□□□ -1.89
NXF1Q9UBU9 SEM1P1-201ENST00000506694 209 ntBASIC3.24□□□□□ -1.89
NXF1Q9UBU9 SNORA31.1-201ENST00000515993 133 ntBASIC3.24□□□□□ -1.89
NXF1Q9UBU9 SNORA31.5-201ENST00000516190 133 ntBASIC3.24□□□□□ -1.89
NXF1Q9UBU9 RNU6-807P-201ENST00000516805 107 ntBASIC3.24□□□□□ -1.89
NXF1Q9UBU9 RNU6-958P-201ENST00000516995 106 ntBASIC3.24□□□□□ -1.89
NXF1Q9UBU9 RNU6-1116P-201ENST00000517269 99 ntBASIC3.24□□□□□ -1.89
NXF1Q9UBU9 MIR4474-201ENST00000579189 78 ntBASIC3.24□□□□□ -1.89
NXF1Q9UBU9 MIR4796-201ENST00000580742 81 ntBASIC3.24□□□□□ -1.89
NXF1Q9UBU9 AC007318.2-201ENST00000620999 243 ntBASIC3.24□□□□□ -1.89
NXF1Q9UBU9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.24□□□□□ -1.89
NXF1Q9UBU9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NXF1Q9UBU9 AC073325.2-201ENST00000339545 159 ntBASIC3.23□□□□□ -1.89
NXF1Q9UBU9 RNU6-546P-201ENST00000383991 107 ntBASIC3.23□□□□□ -1.89
NXF1Q9UBU9 RNU6-342P-201ENST00000384521 104 ntBASIC3.23□□□□□ -1.89
NXF1Q9UBU9 RNA5SP482-201ENST00000391269 118 ntBASIC3.23□□□□□ -1.89
NXF1Q9UBU9 RNA5SP274-201ENST00000410484 108 ntBASIC3.23□□□□□ -1.89
NXF1Q9UBU9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.23□□□□□ -1.89
NXF1Q9UBU9 AC093423.1-201ENST00000440817 142 ntBASIC3.23□□□□□ -1.89
NXF1Q9UBU9 AL163195.1-201ENST00000496941 348 ntBASIC3.23□□□□□ -1.89
NXF1Q9UBU9 Y_RNA.660-201ENST00000516002 120 ntBASIC3.23□□□□□ -1.89
NXF1Q9UBU9 MTND5P40-201ENST00000559945 246 ntBASIC3.23□□□□□ -1.89
NXF1Q9UBU9 SNORD3E-202ENST00000627253 216 ntBASIC3.23□□□□□ -1.89
NXF1Q9UBU9 AL137790.1-201ENST00000634283 177 ntBASIC3.23□□□□□ -1.89
NXF1Q9UBU9 AL442644.1-201ENST00000454390 3105 ntBASIC3.23□□□□□ -1.89
NXF1Q9UBU9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NXF1Q9UBU9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms