Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC074198.2-201ENST00000508153 258 ntBASIC1.6□□□□□ -2.15
LRFN1Q9P244 RNU6-922P-201ENST00000516753 99 ntBASIC1.6□□□□□ -2.15
LRFN1Q9P244 AC109810.1-201ENST00000534066 224 ntBASIC1.6□□□□□ -2.15
LRFN1Q9P244 MRPS18CP4-201ENST00000535821 231 ntBASIC1.6□□□□□ -2.15
LRFN1Q9P244 MIR4419B-201ENST00000577260 68 ntBASIC1.6□□□□□ -2.15
LRFN1Q9P244 GHRLOS.1-201ENST00000610995 70 ntBASIC1.6□□□□□ -2.15
LRFN1Q9P244 RNU6-442P-201ENST00000383968 104 ntBASIC1.59□□□□□ -2.15
LRFN1Q9P244 RNU6-886P-201ENST00000384319 105 ntBASIC1.59□□□□□ -2.15
LRFN1Q9P244 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
LRFN1Q9P244 MIR548I3-201ENST00000408378 149 ntBASIC1.59□□□□□ -2.15
LRFN1Q9P244 MIR548I1-201ENST00000408810 149 ntBASIC1.59□□□□□ -2.15
LRFN1Q9P244 Y_RNA.622-201ENST00000411091 108 ntBASIC1.59□□□□□ -2.15
LRFN1Q9P244 AC005840.1-201ENST00000498412 377 ntBASIC1.59□□□□□ -2.15
LRFN1Q9P244 TRMT112P2-201ENST00000512910 132 ntBASIC1.59□□□□□ -2.15
LRFN1Q9P244 Y_RNA.662-201ENST00000516028 97 ntBASIC1.59□□□□□ -2.15
LRFN1Q9P244 RNU7-149P-201ENST00000516739 59 ntBASIC1.59□□□□□ -2.15
LRFN1Q9P244 MIR8070-201ENST00000616510 88 ntBASIC1.59□□□□□ -2.15
LRFN1Q9P244 RNY1P10-201ENST00000363268 113 ntBASIC1.58□□□□□ -2.16
LRFN1Q9P244 RNU6-275P-201ENST00000364910 107 ntBASIC1.58□□□□□ -2.16
LRFN1Q9P244 Y_RNA.555-201ENST00000384673 110 ntBASIC1.58□□□□□ -2.16
LRFN1Q9P244 PCNPP3-201ENST00000393579 471 ntBASIC1.58□□□□□ -2.16
LRFN1Q9P244 SNRPGP14-201ENST00000435400 219 ntBASIC1.58□□□□□ -2.16
LRFN1Q9P244 AL121914.1-201ENST00000450188 156 ntBASIC1.58□□□□□ -2.16
LRFN1Q9P244 SNORD77.4-201ENST00000516158 81 ntBASIC1.58□□□□□ -2.16
LRFN1Q9P244 AL357312.1-201ENST00000603879 298 ntBASIC1.58□□□□□ -2.16
LRFN1Q9P244 AL359821.1-201ENST00000605519 182 ntBASIC1.58□□□□□ -2.16
LRFN1Q9P244 Pinc.1-201ENST00000616452 154 ntBASIC1.58□□□□□ -2.16
LRFN1Q9P244 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.58□□□□□ -2.16
LRFN1Q9P244 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
LRFN1Q9P244 RNU6-312P-201ENST00000364629 107 ntBASIC1.57□□□□□ -2.16
LRFN1Q9P244 RNU6-728P-201ENST00000365375 104 ntBASIC1.57□□□□□ -2.16
LRFN1Q9P244 SNORD38C-201ENST00000384381 69 ntBASIC1.57□□□□□ -2.16
LRFN1Q9P244 Y_RNA.508-201ENST00000384502 114 ntBASIC1.57□□□□□ -2.16
LRFN1Q9P244 MIR15B-201ENST00000385045 98 ntBASIC1.57□□□□□ -2.16
LRFN1Q9P244 MIR136-201ENST00000385207 82 ntBASIC1.57□□□□□ -2.16
LRFN1Q9P244 SNORD72-201ENST00000390994 80 ntBASIC1.57□□□□□ -2.16
LRFN1Q9P244 RNU2-55P-201ENST00000411146 174 ntBASIC1.57□□□□□ -2.16
LRFN1Q9P244 AP1B1P2-201ENST00000416196 106 ntBASIC1.57□□□□□ -2.16
LRFN1Q9P244 RNU6-970P-201ENST00000516312 107 ntBASIC1.57□□□□□ -2.16
LRFN1Q9P244 RNU6-165P-201ENST00000517170 99 ntBASIC1.57□□□□□ -2.16
LRFN1Q9P244 AC090142.3-201ENST00000519012 385 ntBASIC1.57□□□□□ -2.16
LRFN1Q9P244 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.57□□□□□ -2.16
LRFN1Q9P244 MIR3618-201ENST00000580330 88 ntBASIC1.57□□□□□ -2.16
LRFN1Q9P244 MIR4303-201ENST00000581299 66 ntBASIC1.57□□□□□ -2.16
LRFN1Q9P244 FAM106DP-201ENST00000586416 501 ntBASIC1.57□□□□□ -2.16
LRFN1Q9P244 AP001485.1-201ENST00000604799 199 ntBASIC1.57□□□□□ -2.16
LRFN1Q9P244 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
LRFN1Q9P244 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.56□□□□□ -2.16
LRFN1Q9P244 Y_RNA.23-201ENST00000362496 106 ntBASIC1.56□□□□□ -2.16
LRFN1Q9P244 SNORD45.3-201ENST00000363836 72 ntBASIC1.56□□□□□ -2.16
LRFN1Q9P244 RNU6-1138P-201ENST00000365359 106 ntBASIC1.56□□□□□ -2.16
LRFN1Q9P244 RNU6-484P-201ENST00000384016 107 ntBASIC1.56□□□□□ -2.16
LRFN1Q9P244 RNU6-209P-201ENST00000384118 107 ntBASIC1.56□□□□□ -2.16
LRFN1Q9P244 Y_RNA.486-201ENST00000384398 107 ntBASIC1.56□□□□□ -2.16
LRFN1Q9P244 AC015922.2-201ENST00000435593 184 ntBASIC1.56□□□□□ -2.16
LRFN1Q9P244 RNU6-1299P-201ENST00000516316 100 ntBASIC1.56□□□□□ -2.16
LRFN1Q9P244 CYP3A52P-201ENST00000563326 91 ntBASIC1.56□□□□□ -2.16
LRFN1Q9P244 MIR4255-201ENST00000579351 72 ntBASIC1.56□□□□□ -2.16
LRFN1Q9P244 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LRFN1Q9P244 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.56□□□□□ -2.16
LRFN1Q9P244 Y_RNA.180-201ENST00000363867 113 ntBASIC1.55□□□□□ -2.16
LRFN1Q9P244 SNORA25.9-201ENST00000365087 128 ntBASIC1.55□□□□□ -2.16
LRFN1Q9P244 MIR499A-201ENST00000384903 122 ntBASIC1.55□□□□□ -2.16
LRFN1Q9P244 SEPT7P4-201ENST00000437076 306 ntBASIC1.55□□□□□ -2.16
LRFN1Q9P244 RNU6-126P-201ENST00000516685 103 ntBASIC1.55□□□□□ -2.16
LRFN1Q9P244 RN7SKP88-201ENST00000516847 250 ntBASIC1.55□□□□□ -2.16
LRFN1Q9P244 MIR4662B-201ENST00000579498 81 ntBASIC1.55□□□□□ -2.16
LRFN1Q9P244 7SK.8-201ENST00000612110 250 ntBASIC1.55□□□□□ -2.16
LRFN1Q9P244 7SK.11-201ENST00000615477 250 ntBASIC1.55□□□□□ -2.16
LRFN1Q9P244 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.55□□□□□ -2.16
LRFN1Q9P244 7SK.13-201ENST00000622040 250 ntBASIC1.55□□□□□ -2.16
LRFN1Q9P244 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LRFN1Q9P244 Y_RNA.432-201ENST00000384087 111 ntBASIC1.54□□□□□ -2.16
LRFN1Q9P244 Y_RNA.441-201ENST00000384123 112 ntBASIC1.54□□□□□ -2.16
LRFN1Q9P244 SNORD26-201ENST00000384147 75 ntBASIC1.54□□□□□ -2.16
LRFN1Q9P244 MIR516B2-201ENST00000385190 85 ntBASIC1.54□□□□□ -2.16
LRFN1Q9P244 SNORA67.5-201ENST00000391036 107 ntBASIC1.54□□□□□ -2.16
LRFN1Q9P244 RNU4-43P-201ENST00000410628 137 ntBASIC1.54□□□□□ -2.16
LRFN1Q9P244 RNU5E-9P-201ENST00000411164 104 ntBASIC1.54□□□□□ -2.16
LRFN1Q9P244 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.54□□□□□ -2.16
LRFN1Q9P244 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.54□□□□□ -2.16
LRFN1Q9P244 MIR4431-201ENST00000579990 94 ntBASIC1.54□□□□□ -2.16
LRFN1Q9P244 AC006441.5-201ENST00000612680 209 ntBASIC1.54□□□□□ -2.16
LRFN1Q9P244 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LRFN1Q9P244 RNU6-268P-201ENST00000364174 107 ntBASIC1.53□□□□□ -2.16
LRFN1Q9P244 RNU6-1135P-201ENST00000411083 103 ntBASIC1.53□□□□□ -2.16
LRFN1Q9P244 RNU6-830P-201ENST00000516353 107 ntBASIC1.53□□□□□ -2.16
LRFN1Q9P244 DNAJC19P9-201ENST00000555084 351 ntBASIC1.53□□□□□ -2.16
LRFN1Q9P244 BX248123.2-201ENST00000606318 124 ntBASIC1.53□□□□□ -2.16
LRFN1Q9P244 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.53□□□□□ -2.17
LRFN1Q9P244 Y_RNA.91-201ENST00000363042 107 ntBASIC1.52□□□□□ -2.17
LRFN1Q9P244 Y_RNA.634-201ENST00000364811 113 ntBASIC1.52□□□□□ -2.17
LRFN1Q9P244 Y_RNA.355-201ENST00000365462 98 ntBASIC1.52□□□□□ -2.17
LRFN1Q9P244 Y_RNA.357-201ENST00000365487 109 ntBASIC1.52□□□□□ -2.17
LRFN1Q9P244 RNU2-70P-201ENST00000410718 179 ntBASIC1.52□□□□□ -2.17
LRFN1Q9P244 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.52□□□□□ -2.17
LRFN1Q9P244 RNA5SP153-201ENST00000516498 76 ntBASIC1.52□□□□□ -2.17
LRFN1Q9P244 RNU6-197P-201ENST00000516680 100 ntBASIC1.52□□□□□ -2.17
LRFN1Q9P244 SNORA74.3-201ENST00000517108 154 ntBASIC1.52□□□□□ -2.17
LRFN1Q9P244 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms