Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RNU7-12P-201ENST00000516030 62 ntBASIC2.79□□□□□ -1.96
CNTN3Q9P232 RNA5SP148-201ENST00000516527 94 ntBASIC2.79□□□□□ -1.96
CNTN3Q9P232 MIR4529-201ENST00000578110 78 ntBASIC2.79□□□□□ -1.96
CNTN3Q9P232 MIR5194-201ENST00000582634 120 ntBASIC2.79□□□□□ -1.96
CNTN3Q9P232 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CNTN3Q9P232 MIR203B-201ENST00000636080 86 ntBASIC2.79□□□□□ -1.96
CNTN3Q9P232 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CNTN3Q9P232 Y_RNA.78-201ENST00000362970 110 ntBASIC2.78□□□□□ -1.96
CNTN3Q9P232 RNU6-1031P-201ENST00000384773 107 ntBASIC2.78□□□□□ -1.96
CNTN3Q9P232 MIR520A-201ENST00000384862 85 ntBASIC2.78□□□□□ -1.96
CNTN3Q9P232 MIR597-201ENST00000384968 97 ntBASIC2.78□□□□□ -1.96
CNTN3Q9P232 MIR452-201ENST00000385020 85 ntBASIC2.78□□□□□ -1.96
CNTN3Q9P232 MT-TI-201ENST00000387365 69 ntBASIC2.78□□□□□ -1.96
CNTN3Q9P232 HMGN2P39-201ENST00000398005 273 ntBASIC2.78□□□□□ -1.96
CNTN3Q9P232 MIR1283-2-201ENST00000408621 87 ntBASIC2.78□□□□□ -1.96
CNTN3Q9P232 SNX2P2-201ENST00000424553 323 ntBASIC2.78□□□□□ -1.96
CNTN3Q9P232 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.78□□□□□ -1.96
CNTN3Q9P232 SNORA40.13-201ENST00000516379 120 ntBASIC2.78□□□□□ -1.96
CNTN3Q9P232 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CNTN3Q9P232 MIR4446-201ENST00000578505 67 ntBASIC2.78□□□□□ -1.96
CNTN3Q9P232 RNU4-82P-201ENST00000362443 140 ntBASIC2.77□□□□□ -1.97
CNTN3Q9P232 SNORA67.1-201ENST00000364749 141 ntBASIC2.77□□□□□ -1.97
CNTN3Q9P232 RNU6-905P-201ENST00000384434 107 ntBASIC2.77□□□□□ -1.97
CNTN3Q9P232 RNU6-1104P-201ENST00000384723 104 ntBASIC2.77□□□□□ -1.97
CNTN3Q9P232 MIR27B-201ENST00000385129 97 ntBASIC2.77□□□□□ -1.97
CNTN3Q9P232 AL513328.1-201ENST00000446460 224 ntBASIC2.77□□□□□ -1.97
CNTN3Q9P232 RNU6-893P-201ENST00000458841 100 ntBASIC2.77□□□□□ -1.97
CNTN3Q9P232 RNA5SP320-201ENST00000516263 124 ntBASIC2.77□□□□□ -1.97
CNTN3Q9P232 RNU2-35P-201ENST00000516446 142 ntBASIC2.77□□□□□ -1.97
CNTN3Q9P232 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.77□□□□□ -1.97
CNTN3Q9P232 AC245884.12-201ENST00000615364 59 ntBASIC2.77□□□□□ -1.97
CNTN3Q9P232 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CNTN3Q9P232 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.76□□□□□ -1.97
CNTN3Q9P232 Y_RNA.344-201ENST00000365381 112 ntBASIC2.76□□□□□ -1.97
CNTN3Q9P232 MIR518A2-201ENST00000384966 87 ntBASIC2.76□□□□□ -1.97
CNTN3Q9P232 SNORA48.1-201ENST00000390879 135 ntBASIC2.76□□□□□ -1.97
CNTN3Q9P232 AL022718.1-201ENST00000412004 84 ntBASIC2.76□□□□□ -1.97
CNTN3Q9P232 HMGN2P3-201ENST00000433603 273 ntBASIC2.76□□□□□ -1.97
CNTN3Q9P232 HMGN2P5-201ENST00000436882 273 ntBASIC2.76□□□□□ -1.97
CNTN3Q9P232 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.76□□□□□ -1.97
CNTN3Q9P232 AC090821.2-201ENST00000523552 176 ntBASIC2.76□□□□□ -1.97
CNTN3Q9P232 AC007336.1-201ENST00000576365 3828 ntBASIC2.76□□□□□ -1.97
CNTN3Q9P232 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CNTN3Q9P232 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CNTN3Q9P232 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
CNTN3Q9P232 SNORA70.7-201ENST00000384159 133 ntBASIC2.75□□□□□ -1.97
CNTN3Q9P232 SNORA67.4-201ENST00000384688 142 ntBASIC2.75□□□□□ -1.97
CNTN3Q9P232 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CNTN3Q9P232 MIR1912-201ENST00000410389 80 ntBASIC2.75□□□□□ -1.97
CNTN3Q9P232 RNU2-7P-201ENST00000410794 178 ntBASIC2.75□□□□□ -1.97
CNTN3Q9P232 RNA5SP144-201ENST00000410846 116 ntBASIC2.75□□□□□ -1.97
CNTN3Q9P232 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.75□□□□□ -1.97
CNTN3Q9P232 UBL5P3-201ENST00000475112 231 ntBASIC2.75□□□□□ -1.97
CNTN3Q9P232 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.75□□□□□ -1.97
CNTN3Q9P232 RNA5SP481-201ENST00000516814 122 ntBASIC2.75□□□□□ -1.97
CNTN3Q9P232 Y_RNA.818-201ENST00000618813 71 ntBASIC2.75□□□□□ -1.97
CNTN3Q9P232 AC021613.1-201ENST00000623880 111 ntBASIC2.75□□□□□ -1.97
CNTN3Q9P232 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.75□□□□□ -1.97
CNTN3Q9P232 AL162726.3-218ENST00000636401 95 ntBASIC2.75□□□□□ -1.97
CNTN3Q9P232 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CNTN3Q9P232 AC080100.1-201ENST00000624239 5356 ntBASIC2.74□□□□□ -1.97
CNTN3Q9P232 SNORA3A-201ENST00000364113 130 ntBASIC2.74□□□□□ -1.97
CNTN3Q9P232 RNU1-51P-201ENST00000365345 176 ntBASIC2.74□□□□□ -1.97
CNTN3Q9P232 MIR136-201ENST00000385207 82 ntBASIC2.74□□□□□ -1.97
CNTN3Q9P232 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.74□□□□□ -1.97
CNTN3Q9P232 RNU6-970P-201ENST00000516312 107 ntBASIC2.74□□□□□ -1.97
CNTN3Q9P232 SCARNA16.3-201ENST00000516595 184 ntBASIC2.74□□□□□ -1.97
CNTN3Q9P232 RNU7-181P-201ENST00000517234 74 ntBASIC2.74□□□□□ -1.97
CNTN3Q9P232 AC022523.2-201ENST00000561045 150 ntBASIC2.74□□□□□ -1.97
CNTN3Q9P232 SUB1P4-201ENST00000566062 339 ntBASIC2.74□□□□□ -1.97
CNTN3Q9P232 HSPE1P19-201ENST00000603327 295 ntBASIC2.74□□□□□ -1.97
CNTN3Q9P232 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.74□□□□□ -1.97
CNTN3Q9P232 U1.36-201ENST00000620684 176 ntBASIC2.74□□□□□ -1.97
CNTN3Q9P232 U4.3-201ENST00000621047 82 ntBASIC2.74□□□□□ -1.97
CNTN3Q9P232 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.74□□□□□ -1.97
CNTN3Q9P232 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.74□□□□□ -1.97
CNTN3Q9P232 RNU6-640P-201ENST00000363693 105 ntBASIC2.73□□□□□ -1.97
CNTN3Q9P232 RNU4-16P-201ENST00000364737 141 ntBASIC2.73□□□□□ -1.97
CNTN3Q9P232 Y_RNA.299-201ENST00000364973 94 ntBASIC2.73□□□□□ -1.97
CNTN3Q9P232 SNORA4.2-201ENST00000365313 147 ntBASIC2.73□□□□□ -1.97
CNTN3Q9P232 SNORA11.2-201ENST00000408318 127 ntBASIC2.73□□□□□ -1.97
CNTN3Q9P232 RNU2-11P-201ENST00000459191 187 ntBASIC2.73□□□□□ -1.97
CNTN3Q9P232 RNVU1-2-201ENST00000516326 135 ntBASIC2.73□□□□□ -1.97
CNTN3Q9P232 RNU7-6P-201ENST00000516845 62 ntBASIC2.73□□□□□ -1.97
CNTN3Q9P232 MIR3152-201ENST00000579801 74 ntBASIC2.73□□□□□ -1.97
CNTN3Q9P232 MIR3670-2-201ENST00000582974 65 ntBASIC2.73□□□□□ -1.97
CNTN3Q9P232 MIR3670-1-201ENST00000584160 65 ntBASIC2.73□□□□□ -1.97
CNTN3Q9P232 MIR3670-3-201ENST00000584855 65 ntBASIC2.73□□□□□ -1.97
CNTN3Q9P232 MIR3670-4-201ENST00000612260 65 ntBASIC2.73□□□□□ -1.97
CNTN3Q9P232 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CNTN3Q9P232 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CNTN3Q9P232 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CNTN3Q9P232 RNA5SP393-201ENST00000363423 117 ntBASIC2.72□□□□□ -1.97
CNTN3Q9P232 Y_RNA.370-201ENST00000365589 108 ntBASIC2.72□□□□□ -1.97
CNTN3Q9P232 RNU1-138P-201ENST00000384093 164 ntBASIC2.72□□□□□ -1.97
CNTN3Q9P232 Y_RNA.494-201ENST00000384432 111 ntBASIC2.72□□□□□ -1.97
CNTN3Q9P232 RNA5SP210-201ENST00000391034 120 ntBASIC2.72□□□□□ -1.97
CNTN3Q9P232 MIR1302-4-201ENST00000408701 150 ntBASIC2.72□□□□□ -1.97
CNTN3Q9P232 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CNTN3Q9P232 AC011753.1-201ENST00000451001 220 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms