Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC097639.2-201ENST00000603159 172 ntBASIC1.75□□□□□ -2.13
COL20A1Q9P218 AC106754.2-201ENST00000623006 233 ntBASIC1.75□□□□□ -2.13
COL20A1Q9P218 MIR302D-201ENST00000362275 68 ntBASIC1.74□□□□□ -2.13
COL20A1Q9P218 Y_RNA.555-201ENST00000384673 110 ntBASIC1.74□□□□□ -2.13
COL20A1Q9P218 RNU1-78P-201ENST00000391248 165 ntBASIC1.74□□□□□ -2.13
COL20A1Q9P218 SNX2P2-201ENST00000424553 323 ntBASIC1.74□□□□□ -2.13
COL20A1Q9P218 AC005840.1-201ENST00000498412 377 ntBASIC1.74□□□□□ -2.13
COL20A1Q9P218 Y_RNA.662-201ENST00000516028 97 ntBASIC1.74□□□□□ -2.13
COL20A1Q9P218 RNU6-504P-201ENST00000516568 104 ntBASIC1.74□□□□□ -2.13
COL20A1Q9P218 RNU6-861P-201ENST00000516745 106 ntBASIC1.74□□□□□ -2.13
COL20A1Q9P218 AC090049.2-201ENST00000550377 109 ntBASIC1.74□□□□□ -2.13
COL20A1Q9P218 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
COL20A1Q9P218 AL513534.2-201ENST00000603836 250 ntBASIC1.74□□□□□ -2.13
COL20A1Q9P218 Y_RNA.4-201ENST00000362333 112 ntBASIC1.73□□□□□ -2.13
COL20A1Q9P218 Y_RNA.486-201ENST00000384398 107 ntBASIC1.73□□□□□ -2.13
COL20A1Q9P218 MIR653-201ENST00000385279 96 ntBASIC1.73□□□□□ -2.13
COL20A1Q9P218 AL451046.2-201ENST00000403074 277 ntBASIC1.73□□□□□ -2.13
COL20A1Q9P218 SNRPGP14-201ENST00000435400 219 ntBASIC1.73□□□□□ -2.13
COL20A1Q9P218 AC108729.3-201ENST00000513484 108 ntBASIC1.73□□□□□ -2.13
COL20A1Q9P218 RNU6-197P-201ENST00000516680 100 ntBASIC1.73□□□□□ -2.13
COL20A1Q9P218 MIR4431-201ENST00000579990 94 ntBASIC1.73□□□□□ -2.13
COL20A1Q9P218 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.72□□□□□ -2.13
COL20A1Q9P218 Y_RNA.270-201ENST00000364693 104 ntBASIC1.72□□□□□ -2.13
COL20A1Q9P218 SNORA67.6-201ENST00000391093 99 ntBASIC1.72□□□□□ -2.13
COL20A1Q9P218 SNRPGP13-201ENST00000442212 177 ntBASIC1.72□□□□□ -2.13
COL20A1Q9P218 AC245517.4-201ENST00000448601 281 ntBASIC1.72□□□□□ -2.13
COL20A1Q9P218 RNU6-561P-201ENST00000516222 102 ntBASIC1.72□□□□□ -2.13
COL20A1Q9P218 RNU6-830P-201ENST00000516353 107 ntBASIC1.72□□□□□ -2.13
COL20A1Q9P218 AC090142.3-201ENST00000519012 385 ntBASIC1.72□□□□□ -2.13
COL20A1Q9P218 MIR3937-201ENST00000580135 106 ntBASIC1.72□□□□□ -2.13
COL20A1Q9P218 FAM106DP-201ENST00000586416 501 ntBASIC1.72□□□□□ -2.13
COL20A1Q9P218 AL512598.1-201ENST00000610158 273 ntBASIC1.72□□□□□ -2.13
COL20A1Q9P218 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL20A1Q9P218 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
COL20A1Q9P218 Y_RNA.164-201ENST00000363709 102 ntBASIC1.71□□□□□ -2.14
COL20A1Q9P218 Y_RNA.634-201ENST00000364811 113 ntBASIC1.71□□□□□ -2.14
COL20A1Q9P218 SNORD24-201ENST00000383884 75 ntBASIC1.71□□□□□ -2.14
COL20A1Q9P218 Y_RNA.441-201ENST00000384123 112 ntBASIC1.71□□□□□ -2.14
COL20A1Q9P218 RNU6-886P-201ENST00000384319 105 ntBASIC1.71□□□□□ -2.14
COL20A1Q9P218 MIR517C-201ENST00000385103 95 ntBASIC1.71□□□□□ -2.14
COL20A1Q9P218 AC092991.1-201ENST00000477176 376 ntBASIC1.71□□□□□ -2.14
COL20A1Q9P218 RNU6-1053P-201ENST00000515930 101 ntBASIC1.71□□□□□ -2.14
COL20A1Q9P218 AL357312.1-201ENST00000603879 298 ntBASIC1.71□□□□□ -2.14
COL20A1Q9P218 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.71□□□□□ -2.14
COL20A1Q9P218 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
COL20A1Q9P218 RNU6-643P-201ENST00000384018 107 ntBASIC1.7□□□□□ -2.14
COL20A1Q9P218 MIR526A1-201ENST00000384897 85 ntBASIC1.7□□□□□ -2.14
COL20A1Q9P218 MIR516B2-201ENST00000385190 85 ntBASIC1.7□□□□□ -2.14
COL20A1Q9P218 RNU6-321P-201ENST00000410912 106 ntBASIC1.7□□□□□ -2.14
COL20A1Q9P218 AC027119.1-201ENST00000440877 241 ntBASIC1.7□□□□□ -2.14
COL20A1Q9P218 RNA5SP445-201ENST00000515889 115 ntBASIC1.7□□□□□ -2.14
COL20A1Q9P218 RNU6-917P-201ENST00000516294 104 ntBASIC1.7□□□□□ -2.14
COL20A1Q9P218 AL365434.2-201ENST00000607979 234 ntBASIC1.7□□□□□ -2.14
COL20A1Q9P218 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.7□□□□□ -2.14
COL20A1Q9P218 Y_RNA.180-201ENST00000363867 113 ntBASIC1.69□□□□□ -2.14
COL20A1Q9P218 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
COL20A1Q9P218 PCNPP3-201ENST00000393579 471 ntBASIC1.69□□□□□ -2.14
COL20A1Q9P218 MIR548O-201ENST00000408583 114 ntBASIC1.69□□□□□ -2.14
COL20A1Q9P218 AL354695.1-201ENST00000427935 228 ntBASIC1.69□□□□□ -2.14
COL20A1Q9P218 RPL30P7-201ENST00000479312 323 ntBASIC1.69□□□□□ -2.14
COL20A1Q9P218 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.69□□□□□ -2.14
COL20A1Q9P218 Y_RNA.666-201ENST00000516187 112 ntBASIC1.69□□□□□ -2.14
COL20A1Q9P218 AC019176.1-201ENST00000518519 225 ntBASIC1.69□□□□□ -2.14
COL20A1Q9P218 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.69□□□□□ -2.14
COL20A1Q9P218 AC015726.2-201ENST00000620112 122 ntBASIC1.69□□□□□ -2.14
COL20A1Q9P218 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.69□□□□□ -2.14
COL20A1Q9P218 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
COL20A1Q9P218 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
COL20A1Q9P218 Y_RNA.357-201ENST00000365487 109 ntBASIC1.68□□□□□ -2.14
COL20A1Q9P218 MIR1304-201ENST00000408243 91 ntBASIC1.68□□□□□ -2.14
COL20A1Q9P218 MIR548I3-201ENST00000408378 149 ntBASIC1.68□□□□□ -2.14
COL20A1Q9P218 MIR548I1-201ENST00000408810 149 ntBASIC1.68□□□□□ -2.14
COL20A1Q9P218 RNU6-1135P-201ENST00000411083 103 ntBASIC1.68□□□□□ -2.14
COL20A1Q9P218 AC107027.2-201ENST00000512197 115 ntBASIC1.68□□□□□ -2.14
COL20A1Q9P218 RNU6-693P-201ENST00000516134 107 ntBASIC1.68□□□□□ -2.14
COL20A1Q9P218 SNORA31.24-201ENST00000517232 57 ntBASIC1.68□□□□□ -2.14
COL20A1Q9P218 AL359821.1-201ENST00000605519 182 ntBASIC1.68□□□□□ -2.14
COL20A1Q9P218 GHRLOS.1-201ENST00000610995 70 ntBASIC1.68□□□□□ -2.14
COL20A1Q9P218 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.68□□□□□ -2.14
COL20A1Q9P218 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.67□□□□□ -2.14
COL20A1Q9P218 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.67□□□□□ -2.14
COL20A1Q9P218 Y_RNA.66-201ENST00000362862 102 ntBASIC1.67□□□□□ -2.14
COL20A1Q9P218 RNU6-888P-201ENST00000363010 101 ntBASIC1.67□□□□□ -2.14
COL20A1Q9P218 Y_RNA.91-201ENST00000363042 107 ntBASIC1.67□□□□□ -2.14
COL20A1Q9P218 MT-TR-201ENST00000387439 65 ntBASIC1.67□□□□□ -2.14
COL20A1Q9P218 SEPT7P4-201ENST00000437076 306 ntBASIC1.67□□□□□ -2.14
COL20A1Q9P218 SNORD116-25-201ENST00000516517 92 ntBASIC1.67□□□□□ -2.14
COL20A1Q9P218 Y_RNA.150-201ENST00000363562 102 ntBASIC1.66□□□□□ -2.14
COL20A1Q9P218 RNU4-84P-201ENST00000364200 139 ntBASIC1.66□□□□□ -2.14
COL20A1Q9P218 SNORA1.2-201ENST00000365189 134 ntBASIC1.66□□□□□ -2.14
COL20A1Q9P218 RNU6-1067P-201ENST00000384752 107 ntBASIC1.66□□□□□ -2.14
COL20A1Q9P218 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
COL20A1Q9P218 RNU6-239P-201ENST00000390990 99 ntBASIC1.66□□□□□ -2.14
COL20A1Q9P218 RPL31P63-201ENST00000422565 375 ntBASIC1.66□□□□□ -2.14
COL20A1Q9P218 AC087499.4-201ENST00000448505 178 ntBASIC1.66□□□□□ -2.14
COL20A1Q9P218 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.66□□□□□ -2.14
COL20A1Q9P218 RNU7-25P-201ENST00000516544 62 ntBASIC1.66□□□□□ -2.14
COL20A1Q9P218 RNU6-922P-201ENST00000516753 99 ntBASIC1.66□□□□□ -2.14
COL20A1Q9P218 SNORA74.3-201ENST00000517108 154 ntBASIC1.66□□□□□ -2.14
COL20A1Q9P218 MIR378D2-201ENST00000580636 98 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms