Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 MAPK10-362ENST00000641864 4484 ntBASIC4.49□□□□□ -1.69
FOXD4L1Q9NU39 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
FOXD4L1Q9NU39 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
FOXD4L1Q9NU39 Z98941.1-201ENST00000407764 100 ntBASIC4.48□□□□□ -1.69
FOXD4L1Q9NU39 snoU13.2-201ENST00000459201 104 ntBASIC4.48□□□□□ -1.69
FOXD4L1Q9NU39 SNORA18.5-201ENST00000516616 101 ntBASIC4.48□□□□□ -1.69
FOXD4L1Q9NU39 AC008011.1-201ENST00000545989 227 ntBASIC4.48□□□□□ -1.69
FOXD4L1Q9NU39 MIR4644-201ENST00000579929 84 ntBASIC4.48□□□□□ -1.69
FOXD4L1Q9NU39 AL137849.1-201ENST00000604767 169 ntBASIC4.48□□□□□ -1.69
FOXD4L1Q9NU39 AL096861.1-201ENST00000610899 123 ntBASIC4.48□□□□□ -1.69
FOXD4L1Q9NU39 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXD4L1Q9NU39 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXD4L1Q9NU39 Y_RNA.264-201ENST00000364665 102 ntBASIC4.47□□□□□ -1.69
FOXD4L1Q9NU39 RNU1-51P-201ENST00000365345 176 ntBASIC4.47□□□□□ -1.69
FOXD4L1Q9NU39 MIR635-201ENST00000384830 98 ntBASIC4.47□□□□□ -1.69
FOXD4L1Q9NU39 Z96811.1-201ENST00000445880 108 ntBASIC4.47□□□□□ -1.69
FOXD4L1Q9NU39 AC009474.2-201ENST00000451383 136 ntBASIC4.47□□□□□ -1.69
FOXD4L1Q9NU39 AC026402.1-201ENST00000513642 170 ntBASIC4.47□□□□□ -1.69
FOXD4L1Q9NU39 U1.36-201ENST00000620684 176 ntBASIC4.47□□□□□ -1.69
FOXD4L1Q9NU39 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXD4L1Q9NU39 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXD4L1Q9NU39 Y_RNA.119-201ENST00000363301 96 ntBASIC4.46□□□□□ -1.7
FOXD4L1Q9NU39 RNA5SP48-201ENST00000363969 126 ntBASIC4.46□□□□□ -1.7
FOXD4L1Q9NU39 HSPE1P24-201ENST00000450782 238 ntBASIC4.46□□□□□ -1.7
FOXD4L1Q9NU39 RNA5SP445-201ENST00000515889 115 ntBASIC4.46□□□□□ -1.7
FOXD4L1Q9NU39 MIR6867-201ENST00000610636 67 ntBASIC4.46□□□□□ -1.7
FOXD4L1Q9NU39 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
FOXD4L1Q9NU39 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXD4L1Q9NU39 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXD4L1Q9NU39 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXD4L1Q9NU39 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXD4L1Q9NU39 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXD4L1Q9NU39 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXD4L1Q9NU39 MIR548U-201ENST00000390728 81 ntBASIC4.45□□□□□ -1.7
FOXD4L1Q9NU39 RNU6-243P-201ENST00000391140 107 ntBASIC4.45□□□□□ -1.7
FOXD4L1Q9NU39 RPS29P31-201ENST00000446147 164 ntBASIC4.45□□□□□ -1.7
FOXD4L1Q9NU39 AC244205.2-202ENST00000635781 342 ntBASIC4.45□□□□□ -1.7
FOXD4L1Q9NU39 AL161722.3-201ENST00000605789 2983 ntBASIC4.45□□□□□ -1.7
FOXD4L1Q9NU39 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXD4L1Q9NU39 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXD4L1Q9NU39 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXD4L1Q9NU39 RNU6-1254P-201ENST00000391266 104 ntBASIC4.44□□□□□ -1.7
FOXD4L1Q9NU39 DEFB122-202ENST00000569013 197 ntBASIC4.44□□□□□ -1.7
FOXD4L1Q9NU39 SNORA4-201ENST00000584302 138 ntBASIC4.44□□□□□ -1.7
FOXD4L1Q9NU39 AC104996.3-201ENST00000590718 94 ntBASIC4.44□□□□□ -1.7
FOXD4L1Q9NU39 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXD4L1Q9NU39 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXD4L1Q9NU39 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
FOXD4L1Q9NU39 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
FOXD4L1Q9NU39 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXD4L1Q9NU39 MIR588-201ENST00000384900 83 ntBASIC4.43□□□□□ -1.7
FOXD4L1Q9NU39 MIR199A2-201ENST00000385289 110 ntBASIC4.43□□□□□ -1.7
FOXD4L1Q9NU39 RHEBP3-201ENST00000411920 351 ntBASIC4.43□□□□□ -1.7
FOXD4L1Q9NU39 RNU6-634P-201ENST00000459134 106 ntBASIC4.43□□□□□ -1.7
FOXD4L1Q9NU39 NDUFB9P3-201ENST00000521269 501 ntBASIC4.43□□□□□ -1.7
FOXD4L1Q9NU39 MIR4738-201ENST00000579134 87 ntBASIC4.43□□□□□ -1.7
FOXD4L1Q9NU39 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXD4L1Q9NU39 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXD4L1Q9NU39 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXD4L1Q9NU39 MIR1193-201ENST00000408109 78 ntBASIC4.42□□□□□ -1.7
FOXD4L1Q9NU39 MRPL49P2-201ENST00000521066 465 ntBASIC4.42□□□□□ -1.7
FOXD4L1Q9NU39 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
FOXD4L1Q9NU39 RNU6-466P-201ENST00000391224 103 ntBASIC4.41□□□□□ -1.7
FOXD4L1Q9NU39 AC244023.1-201ENST00000426884 112 ntBASIC4.41□□□□□ -1.7
FOXD4L1Q9NU39 AC015818.7-201ENST00000428754 109 ntBASIC4.41□□□□□ -1.7
FOXD4L1Q9NU39 AC005908.1-201ENST00000468701 347 ntBASIC4.41□□□□□ -1.7
FOXD4L1Q9NU39 SNORD92-201ENST00000585078 85 ntBASIC4.41□□□□□ -1.7
FOXD4L1Q9NU39 AC242498.1-201ENST00000604134 111 ntBASIC4.41□□□□□ -1.7
FOXD4L1Q9NU39 MIR6500-201ENST00000622700 86 ntBASIC4.41□□□□□ -1.7
FOXD4L1Q9NU39 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXD4L1Q9NU39 RNU6-208P-201ENST00000362431 107 ntBASIC4.4□□□□□ -1.71
FOXD4L1Q9NU39 Y_RNA.491-201ENST00000384417 107 ntBASIC4.4□□□□□ -1.71
FOXD4L1Q9NU39 RNU6-649P-201ENST00000384463 107 ntBASIC4.4□□□□□ -1.71
FOXD4L1Q9NU39 Y_RNA.532-201ENST00000384590 113 ntBASIC4.4□□□□□ -1.71
FOXD4L1Q9NU39 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
FOXD4L1Q9NU39 RNU6-360P-201ENST00000390944 104 ntBASIC4.4□□□□□ -1.71
FOXD4L1Q9NU39 AL356095.1-201ENST00000417217 199 ntBASIC4.4□□□□□ -1.71
FOXD4L1Q9NU39 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXD4L1Q9NU39 SNORD111.1-201ENST00000516421 86 ntBASIC4.4□□□□□ -1.71
FOXD4L1Q9NU39 SNORA31.15-201ENST00000516771 132 ntBASIC4.4□□□□□ -1.71
FOXD4L1Q9NU39 MIR3064-201ENST00000581130 66 ntBASIC4.4□□□□□ -1.71
FOXD4L1Q9NU39 AC068724.3-201ENST00000625906 87 ntBASIC4.4□□□□□ -1.71
FOXD4L1Q9NU39 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
FOXD4L1Q9NU39 SNORD36A-201ENST00000362874 73 ntBASIC4.39□□□□□ -1.71
FOXD4L1Q9NU39 RNA5SP50-201ENST00000363731 107 ntBASIC4.39□□□□□ -1.71
FOXD4L1Q9NU39 Y_RNA.283-201ENST00000364798 112 ntBASIC4.39□□□□□ -1.71
FOXD4L1Q9NU39 MIR516A2-201ENST00000384888 90 ntBASIC4.39□□□□□ -1.71
FOXD4L1Q9NU39 MIR516A1-201ENST00000385033 90 ntBASIC4.39□□□□□ -1.71
FOXD4L1Q9NU39 AC004975.1-201ENST00000428733 208 ntBASIC4.39□□□□□ -1.71
FOXD4L1Q9NU39 RNU4ATAC9P-201ENST00000517146 126 ntBASIC4.39□□□□□ -1.71
FOXD4L1Q9NU39 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FOXD4L1Q9NU39 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC4.39□□□□□ -1.71
FOXD4L1Q9NU39 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXD4L1Q9NU39 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD4L1Q9NU39 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD4L1Q9NU39 RNU6-687P-201ENST00000516443 89 ntBASIC4.38□□□□□ -1.71
FOXD4L1Q9NU39 MIR1254-2-201ENST00000579553 63 ntBASIC4.38□□□□□ -1.71
FOXD4L1Q9NU39 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD4L1Q9NU39 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD4L1Q9NU39 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms