Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 Y_RNA.182-201ENST00000363880 111 ntBASIC1.42□□□□□ -2.18
UPF2Q9HAU5 RNU6-275P-201ENST00000364910 107 ntBASIC1.42□□□□□ -2.18
UPF2Q9HAU5 Y_RNA.338-201ENST00000365320 114 ntBASIC1.42□□□□□ -2.18
UPF2Q9HAU5 Y_RNA.793-201ENST00000411222 111 ntBASIC1.42□□□□□ -2.18
UPF2Q9HAU5 AL138752.1-201ENST00000452964 351 ntBASIC1.42□□□□□ -2.18
UPF2Q9HAU5 RNU6-917P-201ENST00000516294 104 ntBASIC1.42□□□□□ -2.18
UPF2Q9HAU5 AC007751.1-201ENST00000529260 376 ntBASIC1.42□□□□□ -2.18
UPF2Q9HAU5 AC097639.2-201ENST00000603159 172 ntBASIC1.42□□□□□ -2.18
UPF2Q9HAU5 FTX_2.1-201ENST00000618816 94 ntBASIC1.42□□□□□ -2.18
UPF2Q9HAU5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
UPF2Q9HAU5 RNU6-103P-201ENST00000363686 107 ntBASIC1.41□□□□□ -2.18
UPF2Q9HAU5 RNU6-268P-201ENST00000364174 107 ntBASIC1.41□□□□□ -2.18
UPF2Q9HAU5 RNY3P5-201ENST00000384127 102 ntBASIC1.41□□□□□ -2.18
UPF2Q9HAU5 RNU6-163P-201ENST00000384396 106 ntBASIC1.41□□□□□ -2.18
UPF2Q9HAU5 RNU4-43P-201ENST00000410628 137 ntBASIC1.41□□□□□ -2.18
UPF2Q9HAU5 AP1B1P2-201ENST00000416196 106 ntBASIC1.41□□□□□ -2.18
UPF2Q9HAU5 RPS29P28-201ENST00000446439 141 ntBASIC1.41□□□□□ -2.18
UPF2Q9HAU5 RNU7-95P-201ENST00000459222 64 ntBASIC1.41□□□□□ -2.18
UPF2Q9HAU5 RNA5SP445-201ENST00000515889 115 ntBASIC1.41□□□□□ -2.18
UPF2Q9HAU5 RNU7-12P-201ENST00000516030 62 ntBASIC1.41□□□□□ -2.18
UPF2Q9HAU5 AC090142.3-201ENST00000519012 385 ntBASIC1.41□□□□□ -2.18
UPF2Q9HAU5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.41□□□□□ -2.18
UPF2Q9HAU5 MIR3668-201ENST00000582138 75 ntBASIC1.41□□□□□ -2.18
UPF2Q9HAU5 AC072026.1-201ENST00000605023 201 ntBASIC1.41□□□□□ -2.18
UPF2Q9HAU5 SNORD3E-202ENST00000627253 216 ntBASIC1.41□□□□□ -2.18
UPF2Q9HAU5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.4□□□□□ -2.19
UPF2Q9HAU5 Y_RNA.150-201ENST00000363562 102 ntBASIC1.4□□□□□ -2.19
UPF2Q9HAU5 Y_RNA.240-201ENST00000364469 95 ntBASIC1.4□□□□□ -2.19
UPF2Q9HAU5 RNU4-70P-201ENST00000384579 139 ntBASIC1.4□□□□□ -2.19
UPF2Q9HAU5 MIR548I3-201ENST00000408378 149 ntBASIC1.4□□□□□ -2.19
UPF2Q9HAU5 MIR548I1-201ENST00000408810 149 ntBASIC1.4□□□□□ -2.19
UPF2Q9HAU5 AC245517.4-201ENST00000448601 281 ntBASIC1.4□□□□□ -2.19
UPF2Q9HAU5 AC092991.1-201ENST00000477176 376 ntBASIC1.4□□□□□ -2.19
UPF2Q9HAU5 MRPS18CP4-201ENST00000535821 231 ntBASIC1.4□□□□□ -2.19
UPF2Q9HAU5 DNAJC19P9-201ENST00000555084 351 ntBASIC1.4□□□□□ -2.19
UPF2Q9HAU5 MIR4421-201ENST00000578133 69 ntBASIC1.4□□□□□ -2.19
UPF2Q9HAU5 AC087685.1-201ENST00000587507 141 ntBASIC1.4□□□□□ -2.19
UPF2Q9HAU5 AC006441.5-201ENST00000612680 209 ntBASIC1.4□□□□□ -2.19
UPF2Q9HAU5 Pinc.1-201ENST00000616452 154 ntBASIC1.4□□□□□ -2.19
UPF2Q9HAU5 AC106754.2-201ENST00000623006 233 ntBASIC1.4□□□□□ -2.19
UPF2Q9HAU5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
UPF2Q9HAU5 Y_RNA.23-201ENST00000362496 106 ntBASIC1.39□□□□□ -2.19
UPF2Q9HAU5 Y_RNA.634-201ENST00000364811 113 ntBASIC1.39□□□□□ -2.19
UPF2Q9HAU5 snoU2-30.1-201ENST00000365012 70 ntBASIC1.39□□□□□ -2.19
UPF2Q9HAU5 MIR15B-201ENST00000385045 98 ntBASIC1.39□□□□□ -2.19
UPF2Q9HAU5 MIR513A1-201ENST00000385138 129 ntBASIC1.39□□□□□ -2.19
UPF2Q9HAU5 MIR891A-201ENST00000401237 79 ntBASIC1.39□□□□□ -2.19
UPF2Q9HAU5 Y_RNA.666-201ENST00000516187 112 ntBASIC1.39□□□□□ -2.19
UPF2Q9HAU5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.39□□□□□ -2.19
UPF2Q9HAU5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
UPF2Q9HAU5 RNU6-1084P-201ENST00000362498 107 ntBASIC1.38□□□□□ -2.19
UPF2Q9HAU5 SNORD33-201ENST00000362761 85 ntBASIC1.38□□□□□ -2.19
UPF2Q9HAU5 RNU6-886P-201ENST00000384319 105 ntBASIC1.38□□□□□ -2.19
UPF2Q9HAU5 MIR518F-201ENST00000384973 87 ntBASIC1.38□□□□□ -2.19
UPF2Q9HAU5 RNU2-55P-201ENST00000411146 174 ntBASIC1.38□□□□□ -2.19
UPF2Q9HAU5 SEPT7P4-201ENST00000437076 306 ntBASIC1.38□□□□□ -2.19
UPF2Q9HAU5 AC079140.2-201ENST00000506193 142 ntBASIC1.38□□□□□ -2.19
UPF2Q9HAU5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.38□□□□□ -2.19
UPF2Q9HAU5 AC108729.3-201ENST00000513484 108 ntBASIC1.38□□□□□ -2.19
UPF2Q9HAU5 Y_RNA.797-201ENST00000515977 94 ntBASIC1.38□□□□□ -2.19
UPF2Q9HAU5 RNU6-902P-201ENST00000517212 91 ntBASIC1.38□□□□□ -2.19
UPF2Q9HAU5 AL121890.5-201ENST00000620848 304 ntBASIC1.38□□□□□ -2.19
UPF2Q9HAU5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
UPF2Q9HAU5 RNU6-978P-201ENST00000364371 103 ntBASIC1.37□□□□□ -2.19
UPF2Q9HAU5 SNORD1A-201ENST00000364968 72 ntBASIC1.37□□□□□ -2.19
UPF2Q9HAU5 Y_RNA.336-201ENST00000365307 109 ntBASIC1.37□□□□□ -2.19
UPF2Q9HAU5 SNORD61-201ENST00000384252 73 ntBASIC1.37□□□□□ -2.19
UPF2Q9HAU5 RNU6-939P-201ENST00000384634 107 ntBASIC1.37□□□□□ -2.19
UPF2Q9HAU5 MIR516B2-201ENST00000385190 85 ntBASIC1.37□□□□□ -2.19
UPF2Q9HAU5 MIR653-201ENST00000385279 96 ntBASIC1.37□□□□□ -2.19
UPF2Q9HAU5 SNORD41-201ENST00000386967 70 ntBASIC1.37□□□□□ -2.19
UPF2Q9HAU5 RNU7-25P-201ENST00000516544 62 ntBASIC1.37□□□□□ -2.19
UPF2Q9HAU5 RNU6-197P-201ENST00000516680 100 ntBASIC1.37□□□□□ -2.19
UPF2Q9HAU5 MIR3937-201ENST00000580135 106 ntBASIC1.37□□□□□ -2.19
UPF2Q9HAU5 AL365434.2-201ENST00000607979 234 ntBASIC1.37□□□□□ -2.19
UPF2Q9HAU5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.37□□□□□ -2.19
UPF2Q9HAU5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.36□□□□□ -2.19
UPF2Q9HAU5 RNU6-199P-201ENST00000362954 107 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 Y_RNA.164-201ENST00000363709 102 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 SNORD14E-201ENST00000364009 85 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 RNU6-818P-201ENST00000364837 108 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 RNU6-728P-201ENST00000365375 104 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 RNU6-442P-201ENST00000383968 104 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 Y_RNA.432-201ENST00000384087 111 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 Y_RNA.441-201ENST00000384123 112 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 RNU6-1135P-201ENST00000411083 103 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 RNU6-938P-201ENST00000411285 103 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 AL121914.1-201ENST00000450188 156 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 RNU4-57P-201ENST00000515980 135 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 RNU6-1299P-201ENST00000516316 100 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 Y_RNA.676-201ENST00000516393 96 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 RNA5SP153-201ENST00000516498 76 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 RNU6-182P-201ENST00000516970 105 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 AC019176.1-201ENST00000518519 225 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 snoU13.31-201ENST00000607291 104 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 MIR376A2-201ENST00000636782 80 ntBASIC1.36□□□□□ -2.19
UPF2Q9HAU5 RNU6-888P-201ENST00000363010 101 ntBASIC1.35□□□□□ -2.19
UPF2Q9HAU5 RNY1P11-201ENST00000363759 113 ntBASIC1.35□□□□□ -2.19
UPF2Q9HAU5 RNU6-643P-201ENST00000384018 107 ntBASIC1.35□□□□□ -2.19
UPF2Q9HAU5 SNORA1-201ENST00000384107 130 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 227.5 ms