Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.91□□□□□ -1.46
SENP3Q9H4L4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SENP3Q9H4L4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SENP3Q9H4L4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SENP3Q9H4L4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
SENP3Q9H4L4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SENP3Q9H4L4 MIR1302-7-201ENST00000408841 72 ntBASIC5.9□□□□□ -1.46
SENP3Q9H4L4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC5.9□□□□□ -1.46
SENP3Q9H4L4 AC115115.1-201ENST00000449927 248 ntBASIC5.9□□□□□ -1.46
SENP3Q9H4L4 RN7SL293P-201ENST00000481765 281 ntBASIC5.9□□□□□ -1.46
SENP3Q9H4L4 RNU6-231P-201ENST00000517122 103 ntBASIC5.9□□□□□ -1.46
SENP3Q9H4L4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC5.9□□□□□ -1.46
SENP3Q9H4L4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SENP3Q9H4L4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SENP3Q9H4L4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SENP3Q9H4L4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC5.89□□□□□ -1.47
SENP3Q9H4L4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SENP3Q9H4L4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.89□□□□□ -1.47
SENP3Q9H4L4 RN7SL323P-201ENST00000494712 295 ntBASIC5.89□□□□□ -1.47
SENP3Q9H4L4 AC026271.5-201ENST00000577873 130 ntBASIC5.89□□□□□ -1.47
SENP3Q9H4L4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.89□□□□□ -1.47
SENP3Q9H4L4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SENP3Q9H4L4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SENP3Q9H4L4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.89□□□□□ -1.47
SENP3Q9H4L4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SENP3Q9H4L4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC5.88□□□□□ -1.47
SENP3Q9H4L4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SENP3Q9H4L4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SENP3Q9H4L4 BX510359.4-201ENST00000423750 193 ntBASIC5.88□□□□□ -1.47
SENP3Q9H4L4 RN7SL594P-201ENST00000470590 287 ntBASIC5.88□□□□□ -1.47
SENP3Q9H4L4 RPS26P28-201ENST00000470806 348 ntBASIC5.88□□□□□ -1.47
SENP3Q9H4L4 AC006064.5-201ENST00000541782 248 ntBASIC5.88□□□□□ -1.47
SENP3Q9H4L4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SENP3Q9H4L4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.87□□□□□ -1.47
SENP3Q9H4L4 RPL30P7-201ENST00000479312 323 ntBASIC5.87□□□□□ -1.47
SENP3Q9H4L4 AC100770.1-201ENST00000532310 322 ntBASIC5.87□□□□□ -1.47
SENP3Q9H4L4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.87□□□□□ -1.47
SENP3Q9H4L4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SENP3Q9H4L4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SENP3Q9H4L4 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
SENP3Q9H4L4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC5.86□□□□□ -1.47
SENP3Q9H4L4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SENP3Q9H4L4 SNORA2.1-201ENST00000363089 137 ntBASIC5.86□□□□□ -1.47
SENP3Q9H4L4 RNA5SP246-201ENST00000458909 119 ntBASIC5.86□□□□□ -1.47
SENP3Q9H4L4 U3.45-201ENST00000607547 219 ntBASIC5.86□□□□□ -1.47
SENP3Q9H4L4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SENP3Q9H4L4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SENP3Q9H4L4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SENP3Q9H4L4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
SENP3Q9H4L4 AC073325.2-201ENST00000339545 159 ntBASIC5.85□□□□□ -1.47
SENP3Q9H4L4 Y_RNA.330-201ENST00000365230 109 ntBASIC5.85□□□□□ -1.47
SENP3Q9H4L4 AC138907.6-201ENST00000568401 126 ntBASIC5.85□□□□□ -1.47
SENP3Q9H4L4 AC138869.1-201ENST00000568623 124 ntBASIC5.85□□□□□ -1.47
SENP3Q9H4L4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC5.85□□□□□ -1.47
SENP3Q9H4L4 MIR6739-201ENST00000622461 75 ntBASIC5.85□□□□□ -1.47
SENP3Q9H4L4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SENP3Q9H4L4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.85□□□□□ -1.47
SENP3Q9H4L4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SENP3Q9H4L4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SENP3Q9H4L4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SENP3Q9H4L4 MIR7975-201ENST00000619350 68 ntBASIC5.84□□□□□ -1.47
SENP3Q9H4L4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC5.84□□□□□ -1.47
SENP3Q9H4L4 AL356274.2-201ENST00000624379 3752 ntBASIC5.84□□□□□ -1.47
SENP3Q9H4L4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SENP3Q9H4L4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SENP3Q9H4L4 AC008079.2-201ENST00000623543 20396 ntBASIC5.83□□□□□ -1.48
SENP3Q9H4L4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SENP3Q9H4L4 RNA5SP432-201ENST00000362480 116 ntBASIC5.83□□□□□ -1.48
SENP3Q9H4L4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SENP3Q9H4L4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC5.83□□□□□ -1.48
SENP3Q9H4L4 SNORD111.1-201ENST00000516421 86 ntBASIC5.83□□□□□ -1.48
SENP3Q9H4L4 AC140113.4-201ENST00000622087 222 ntBASIC5.83□□□□□ -1.48
SENP3Q9H4L4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SENP3Q9H4L4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SENP3Q9H4L4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SENP3Q9H4L4 RNA5SP139-201ENST00000364340 117 ntBASIC5.82□□□□□ -1.48
SENP3Q9H4L4 MIR597-201ENST00000384968 97 ntBASIC5.82□□□□□ -1.48
SENP3Q9H4L4 RNU6-269P-201ENST00000391077 97 ntBASIC5.82□□□□□ -1.48
SENP3Q9H4L4 SNORD116.2-201ENST00000391251 93 ntBASIC5.82□□□□□ -1.48
SENP3Q9H4L4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC5.82□□□□□ -1.48
SENP3Q9H4L4 AL157398.1-201ENST00000452981 186 ntBASIC5.82□□□□□ -1.48
SENP3Q9H4L4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
SENP3Q9H4L4 RNU6-322P-201ENST00000516010 103 ntBASIC5.82□□□□□ -1.48
SENP3Q9H4L4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SENP3Q9H4L4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.82□□□□□ -1.48
SENP3Q9H4L4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SENP3Q9H4L4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SENP3Q9H4L4 SNORD35B-201ENST00000363660 87 ntBASIC5.81□□□□□ -1.48
SENP3Q9H4L4 MIR517B-201ENST00000385102 67 ntBASIC5.81□□□□□ -1.48
SENP3Q9H4L4 MIR29C-201ENST00000385231 88 ntBASIC5.81□□□□□ -1.48
SENP3Q9H4L4 RNA5SP179-201ENST00000517284 121 ntBASIC5.81□□□□□ -1.48
SENP3Q9H4L4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC5.81□□□□□ -1.48
SENP3Q9H4L4 AC091167.4-201ENST00000605079 184 ntBASIC5.81□□□□□ -1.48
SENP3Q9H4L4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SENP3Q9H4L4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SENP3Q9H4L4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SENP3Q9H4L4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.8□□□□□ -1.48
SENP3Q9H4L4 Y_RNA.13-201ENST00000362403 112 ntBASIC5.8□□□□□ -1.48
SENP3Q9H4L4 RNU6-698P-201ENST00000363523 107 ntBASIC5.8□□□□□ -1.48
SENP3Q9H4L4 RNU6-34P-201ENST00000364874 107 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms