Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 MIR5197-201ENST00000583721 112 ntBASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 U4atac.1-201ENST00000618345 95 ntBASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 MIR6733-201ENST00000635723 61 ntBASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 MIR376A2-201ENST00000636782 80 ntBASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 FAM35CP-201ENST00000554755 2470 ntBASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 AL161431.1-201ENST00000618966 4205 ntBASIC2.81□□□□□ -1.96
CNTNAP4Q9C0A0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.81□□□□□ -1.96
CNTNAP4Q9C0A0 RNU6-442P-201ENST00000383968 104 ntBASIC2.81□□□□□ -1.96
CNTNAP4Q9C0A0 MIR548A2-201ENST00000384956 97 ntBASIC2.81□□□□□ -1.96
CNTNAP4Q9C0A0 MIR802-201ENST00000390235 94 ntBASIC2.81□□□□□ -1.96
CNTNAP4Q9C0A0 RNU6-893P-201ENST00000458841 100 ntBASIC2.81□□□□□ -1.96
CNTNAP4Q9C0A0 RNU7-28P-201ENST00000516759 62 ntBASIC2.81□□□□□ -1.96
CNTNAP4Q9C0A0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.81□□□□□ -1.96
CNTNAP4Q9C0A0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CNTNAP4Q9C0A0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CNTNAP4Q9C0A0 Y_RNA.17-201ENST00000362433 111 ntBASIC2.8□□□□□ -1.96
CNTNAP4Q9C0A0 Y_RNA.78-201ENST00000362970 110 ntBASIC2.8□□□□□ -1.96
CNTNAP4Q9C0A0 U8.5-201ENST00000364528 136 ntBASIC2.8□□□□□ -1.96
CNTNAP4Q9C0A0 Y_RNA.344-201ENST00000365381 112 ntBASIC2.8□□□□□ -1.96
CNTNAP4Q9C0A0 SNORA8-201ENST00000384574 139 ntBASIC2.8□□□□□ -1.96
CNTNAP4Q9C0A0 RNU6-220P-201ENST00000390919 107 ntBASIC2.8□□□□□ -1.96
CNTNAP4Q9C0A0 AC104332.2-201ENST00000429959 156 ntBASIC2.8□□□□□ -1.96
CNTNAP4Q9C0A0 RNU6-295P-201ENST00000516901 104 ntBASIC2.8□□□□□ -1.96
CNTNAP4Q9C0A0 AC141557.1-201ENST00000540982 400 ntBASIC2.8□□□□□ -1.96
CNTNAP4Q9C0A0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.8□□□□□ -1.96
CNTNAP4Q9C0A0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CNTNAP4Q9C0A0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.8□□□□□ -1.96
CNTNAP4Q9C0A0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CNTNAP4Q9C0A0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CNTNAP4Q9C0A0 MIR302B-201ENST00000362188 73 ntBASIC2.79□□□□□ -1.96
CNTNAP4Q9C0A0 Y_RNA.198-201ENST00000364013 98 ntBASIC2.79□□□□□ -1.96
CNTNAP4Q9C0A0 Y_RNA.244-201ENST00000364484 109 ntBASIC2.79□□□□□ -1.96
CNTNAP4Q9C0A0 Y_RNA.336-201ENST00000365307 109 ntBASIC2.79□□□□□ -1.96
CNTNAP4Q9C0A0 MIR518F-201ENST00000384973 87 ntBASIC2.79□□□□□ -1.96
CNTNAP4Q9C0A0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CNTNAP4Q9C0A0 SNORA26.9-201ENST00000391322 122 ntBASIC2.79□□□□□ -1.96
CNTNAP4Q9C0A0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.79□□□□□ -1.96
CNTNAP4Q9C0A0 AC004486.1-201ENST00000546846 233 ntBASIC2.79□□□□□ -1.96
CNTNAP4Q9C0A0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.79□□□□□ -1.96
CNTNAP4Q9C0A0 SNORA1B-201ENST00000362535 133 ntBASIC2.78□□□□□ -1.96
CNTNAP4Q9C0A0 RNU6-1125P-201ENST00000363601 107 ntBASIC2.78□□□□□ -1.96
CNTNAP4Q9C0A0 SNORD14E-201ENST00000364009 85 ntBASIC2.78□□□□□ -1.96
CNTNAP4Q9C0A0 RNU6-1189P-201ENST00000383958 107 ntBASIC2.78□□□□□ -1.96
CNTNAP4Q9C0A0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CNTNAP4Q9C0A0 RNA5SP482-201ENST00000391269 118 ntBASIC2.78□□□□□ -1.96
CNTNAP4Q9C0A0 AC022137.1-201ENST00000483735 151 ntBASIC2.78□□□□□ -1.96
CNTNAP4Q9C0A0 RNU6-240P-201ENST00000516098 97 ntBASIC2.78□□□□□ -1.96
CNTNAP4Q9C0A0 MIR6132-201ENST00000622083 109 ntBASIC2.78□□□□□ -1.96
CNTNAP4Q9C0A0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.78□□□□□ -1.96
CNTNAP4Q9C0A0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.78□□□□□ -1.97
CNTNAP4Q9C0A0 Y_RNA.73-201ENST00000362910 113 ntBASIC2.77□□□□□ -1.97
CNTNAP4Q9C0A0 RNY4P6-201ENST00000363667 96 ntBASIC2.77□□□□□ -1.97
CNTNAP4Q9C0A0 Y_RNA.290-201ENST00000364879 114 ntBASIC2.77□□□□□ -1.97
CNTNAP4Q9C0A0 snoU2-30.1-201ENST00000365012 70 ntBASIC2.77□□□□□ -1.97
CNTNAP4Q9C0A0 MIR759-201ENST00000390224 91 ntBASIC2.77□□□□□ -1.97
CNTNAP4Q9C0A0 AC009238.1-201ENST00000442165 424 ntBASIC2.77□□□□□ -1.97
CNTNAP4Q9C0A0 AC009237.6-201ENST00000446969 424 ntBASIC2.77□□□□□ -1.97
CNTNAP4Q9C0A0 RNY4P20-201ENST00000516678 93 ntBASIC2.77□□□□□ -1.97
CNTNAP4Q9C0A0 AC022217.4-201ENST00000604389 163 ntBASIC2.77□□□□□ -1.97
CNTNAP4Q9C0A0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
CNTNAP4Q9C0A0 RNU6-1084P-201ENST00000362498 107 ntBASIC2.76□□□□□ -1.97
CNTNAP4Q9C0A0 Y_RNA.93-201ENST00000363066 109 ntBASIC2.76□□□□□ -1.97
CNTNAP4Q9C0A0 SNORD114-6-201ENST00000364393 72 ntBASIC2.76□□□□□ -1.97
CNTNAP4Q9C0A0 AL445646.1-201ENST00000431784 216 ntBASIC2.76□□□□□ -1.97
CNTNAP4Q9C0A0 AL163195.1-201ENST00000496941 348 ntBASIC2.76□□□□□ -1.97
CNTNAP4Q9C0A0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.76□□□□□ -1.97
CNTNAP4Q9C0A0 SNORA31.26-201ENST00000517250 137 ntBASIC2.76□□□□□ -1.97
CNTNAP4Q9C0A0 MIR6845-201ENST00000613182 61 ntBASIC2.76□□□□□ -1.97
CNTNAP4Q9C0A0 MIR2052-201ENST00000636055 55 ntBASIC2.76□□□□□ -1.97
CNTNAP4Q9C0A0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CNTNAP4Q9C0A0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CNTNAP4Q9C0A0 RNU6-414P-201ENST00000363705 104 ntBASIC2.75□□□□□ -1.97
CNTNAP4Q9C0A0 SNORD115-28-201ENST00000363931 81 ntBASIC2.75□□□□□ -1.97
CNTNAP4Q9C0A0 AC087499.4-201ENST00000448505 178 ntBASIC2.75□□□□□ -1.97
CNTNAP4Q9C0A0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.75□□□□□ -1.97
CNTNAP4Q9C0A0 AC084364.2-201ENST00000546924 395 ntBASIC2.75□□□□□ -1.97
CNTNAP4Q9C0A0 MIR4778-201ENST00000577635 80 ntBASIC2.75□□□□□ -1.97
CNTNAP4Q9C0A0 MIR3202-2-201ENST00000635980 79 ntBASIC2.75□□□□□ -1.97
CNTNAP4Q9C0A0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CNTNAP4Q9C0A0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CNTNAP4Q9C0A0 RNU6-461P-201ENST00000364195 107 ntBASIC2.74□□□□□ -1.97
CNTNAP4Q9C0A0 SNORA2.2-201ENST00000365473 135 ntBASIC2.74□□□□□ -1.97
CNTNAP4Q9C0A0 RNU6-1104P-201ENST00000384723 104 ntBASIC2.74□□□□□ -1.97
CNTNAP4Q9C0A0 MIR548O-201ENST00000408583 114 ntBASIC2.74□□□□□ -1.97
CNTNAP4Q9C0A0 RNU7-70P-201ENST00000516941 66 ntBASIC2.74□□□□□ -1.97
CNTNAP4Q9C0A0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CNTNAP4Q9C0A0 SNORD68-201ENST00000363214 84 ntBASIC2.73□□□□□ -1.97
CNTNAP4Q9C0A0 RNU6-268P-201ENST00000364174 107 ntBASIC2.73□□□□□ -1.97
CNTNAP4Q9C0A0 Y_RNA.213-201ENST00000364178 111 ntBASIC2.73□□□□□ -1.97
CNTNAP4Q9C0A0 RNU6-497P-201ENST00000365316 104 ntBASIC2.73□□□□□ -1.97
CNTNAP4Q9C0A0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.73□□□□□ -1.97
CNTNAP4Q9C0A0 RNU6-443P-201ENST00000384780 107 ntBASIC2.73□□□□□ -1.97
CNTNAP4Q9C0A0 SNORA48.3-201ENST00000391081 134 ntBASIC2.73□□□□□ -1.97
CNTNAP4Q9C0A0 RPL39P39-201ENST00000455840 151 ntBASIC2.73□□□□□ -1.97
CNTNAP4Q9C0A0 AC026271.5-201ENST00000577873 130 ntBASIC2.73□□□□□ -1.97
CNTNAP4Q9C0A0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
CNTNAP4Q9C0A0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CNTNAP4Q9C0A0 Y_RNA.37-201ENST00000362606 108 ntBASIC2.72□□□□□ -1.97
CNTNAP4Q9C0A0 RNU6-279P-201ENST00000391297 101 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 205.2 ms