Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 Y_RNA.587-201ENST00000391210 103 ntBASIC1.44□□□□□ -2.18
SIN3AQ96ST3 AL512310.8-201ENST00000550183 120 ntBASIC1.44□□□□□ -2.18
SIN3AQ96ST3 FAM106DP-201ENST00000586416 501 ntBASIC1.44□□□□□ -2.18
SIN3AQ96ST3 MIR8070-201ENST00000616510 88 ntBASIC1.44□□□□□ -2.18
SIN3AQ96ST3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SIN3AQ96ST3 Y_RNA.308-201ENST00000365043 101 ntBASIC1.43□□□□□ -2.18
SIN3AQ96ST3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.43□□□□□ -2.18
SIN3AQ96ST3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.43□□□□□ -2.18
SIN3AQ96ST3 AC023449.1-201ENST00000454464 154 ntBASIC1.43□□□□□ -2.18
SIN3AQ96ST3 RNU6-1007P-201ENST00000516586 107 ntBASIC1.43□□□□□ -2.18
SIN3AQ96ST3 AC009779.6-201ENST00000603972 165 ntBASIC1.43□□□□□ -2.18
SIN3AQ96ST3 AL391903.3-201ENST00000612158 163 ntBASIC1.43□□□□□ -2.18
SIN3AQ96ST3 AC006441.5-201ENST00000612680 209 ntBASIC1.43□□□□□ -2.18
SIN3AQ96ST3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SIN3AQ96ST3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SIN3AQ96ST3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SIN3AQ96ST3 MIR373-201ENST00000362273 69 ntBASIC1.42□□□□□ -2.18
SIN3AQ96ST3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.42□□□□□ -2.18
SIN3AQ96ST3 MIR802-201ENST00000390235 94 ntBASIC1.42□□□□□ -2.18
SIN3AQ96ST3 AL451046.2-201ENST00000403074 277 ntBASIC1.42□□□□□ -2.18
SIN3AQ96ST3 MIR1287-201ENST00000408492 90 ntBASIC1.42□□□□□ -2.18
SIN3AQ96ST3 MIR1276-201ENST00000408707 83 ntBASIC1.42□□□□□ -2.18
SIN3AQ96ST3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.42□□□□□ -2.18
SIN3AQ96ST3 MIR3664-201ENST00000579074 99 ntBASIC1.42□□□□□ -2.18
SIN3AQ96ST3 MIR4308-201ENST00000580634 81 ntBASIC1.42□□□□□ -2.18
SIN3AQ96ST3 Pinc.1-201ENST00000616452 154 ntBASIC1.42□□□□□ -2.18
SIN3AQ96ST3 Y_RNA.486-201ENST00000384398 107 ntBASIC1.41□□□□□ -2.18
SIN3AQ96ST3 MIR136-201ENST00000385207 82 ntBASIC1.41□□□□□ -2.18
SIN3AQ96ST3 RNU6-493P-201ENST00000391321 108 ntBASIC1.41□□□□□ -2.18
SIN3AQ96ST3 AL606845.1-201ENST00000404881 255 ntBASIC1.41□□□□□ -2.18
SIN3AQ96ST3 RNU6-322P-201ENST00000516010 103 ntBASIC1.41□□□□□ -2.18
SIN3AQ96ST3 RN7SKP164-201ENST00000516138 266 ntBASIC1.41□□□□□ -2.18
SIN3AQ96ST3 RNU6-165P-201ENST00000517170 99 ntBASIC1.41□□□□□ -2.18
SIN3AQ96ST3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SIN3AQ96ST3 AC130289.1-201ENST00000577321 73 ntBASIC1.41□□□□□ -2.18
SIN3AQ96ST3 MIR3973-201ENST00000579824 107 ntBASIC1.41□□□□□ -2.18
SIN3AQ96ST3 AP000942.4-201ENST00000604811 241 ntBASIC1.41□□□□□ -2.18
SIN3AQ96ST3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.41□□□□□ -2.18
SIN3AQ96ST3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.41□□□□□ -2.18
SIN3AQ96ST3 AL121890.5-201ENST00000620848 304 ntBASIC1.41□□□□□ -2.18
SIN3AQ96ST3 AC078938.1-201ENST00000620993 318 ntBASIC1.41□□□□□ -2.18
SIN3AQ96ST3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SIN3AQ96ST3 Y_RNA.199-201ENST00000364014 102 ntBASIC1.4□□□□□ -2.19
SIN3AQ96ST3 Y_RNA.242-201ENST00000364473 110 ntBASIC1.4□□□□□ -2.19
SIN3AQ96ST3 RNU6-923P-201ENST00000364753 107 ntBASIC1.4□□□□□ -2.19
SIN3AQ96ST3 RNU6-484P-201ENST00000384016 107 ntBASIC1.4□□□□□ -2.19
SIN3AQ96ST3 RNY3P5-201ENST00000384127 102 ntBASIC1.4□□□□□ -2.19
SIN3AQ96ST3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
SIN3AQ96ST3 RPS29P28-201ENST00000446439 141 ntBASIC1.4□□□□□ -2.19
SIN3AQ96ST3 RNU6-388P-201ENST00000517012 105 ntBASIC1.4□□□□□ -2.19
SIN3AQ96ST3 RNU6-389P-201ENST00000517048 105 ntBASIC1.4□□□□□ -2.19
SIN3AQ96ST3 MIR411-201ENST00000362239 96 ntBASIC1.39□□□□□ -2.19
SIN3AQ96ST3 Y_RNA.200-201ENST00000364018 102 ntBASIC1.39□□□□□ -2.19
SIN3AQ96ST3 RNU6-1228P-201ENST00000391014 107 ntBASIC1.39□□□□□ -2.19
SIN3AQ96ST3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.39□□□□□ -2.19
SIN3AQ96ST3 SNRPGP8-201ENST00000454064 226 ntBASIC1.39□□□□□ -2.19
SIN3AQ96ST3 RPL30P7-201ENST00000479312 323 ntBASIC1.39□□□□□ -2.19
SIN3AQ96ST3 RNU6-830P-201ENST00000516353 107 ntBASIC1.39□□□□□ -2.19
SIN3AQ96ST3 MIR4662B-201ENST00000579498 81 ntBASIC1.39□□□□□ -2.19
SIN3AQ96ST3 AP001485.1-201ENST00000604799 199 ntBASIC1.39□□□□□ -2.19
SIN3AQ96ST3 AC141273.2-201ENST00000618989 130 ntBASIC1.39□□□□□ -2.19
SIN3AQ96ST3 RNU1-93P-201ENST00000364704 169 ntBASIC1.38□□□□□ -2.19
SIN3AQ96ST3 Y_RNA.476-201ENST00000384347 108 ntBASIC1.38□□□□□ -2.19
SIN3AQ96ST3 SNORD38C-201ENST00000384381 69 ntBASIC1.38□□□□□ -2.19
SIN3AQ96ST3 MIR499A-201ENST00000384903 122 ntBASIC1.38□□□□□ -2.19
SIN3AQ96ST3 Y_RNA.622-201ENST00000411091 108 ntBASIC1.38□□□□□ -2.19
SIN3AQ96ST3 RNU2-55P-201ENST00000411146 174 ntBASIC1.38□□□□□ -2.19
SIN3AQ96ST3 Y_RNA.666-201ENST00000516187 112 ntBASIC1.38□□□□□ -2.19
SIN3AQ96ST3 RNU6-561P-201ENST00000516222 102 ntBASIC1.38□□□□□ -2.19
SIN3AQ96ST3 RNU7-25P-201ENST00000516544 62 ntBASIC1.38□□□□□ -2.19
SIN3AQ96ST3 SNORA18.7-201ENST00000516910 131 ntBASIC1.38□□□□□ -2.19
SIN3AQ96ST3 SNORA74.3-201ENST00000517108 154 ntBASIC1.38□□□□□ -2.19
SIN3AQ96ST3 CYP3A52P-201ENST00000563326 91 ntBASIC1.38□□□□□ -2.19
SIN3AQ96ST3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SIN3AQ96ST3 Y_RNA.83-201ENST00000363005 113 ntBASIC1.37□□□□□ -2.19
SIN3AQ96ST3 RNU6-103P-201ENST00000363686 107 ntBASIC1.37□□□□□ -2.19
SIN3AQ96ST3 Y_RNA.274-201ENST00000364714 101 ntBASIC1.37□□□□□ -2.19
SIN3AQ96ST3 MIR15B-201ENST00000385045 98 ntBASIC1.37□□□□□ -2.19
SIN3AQ96ST3 SNORD123-201ENST00000459473 70 ntBASIC1.37□□□□□ -2.19
SIN3AQ96ST3 RPS23P4-201ENST00000487908 423 ntBASIC1.37□□□□□ -2.19
SIN3AQ96ST3 MIR4698-201ENST00000577795 80 ntBASIC1.37□□□□□ -2.19
SIN3AQ96ST3 RNU2-4P-201ENST00000606190 192 ntBASIC1.37□□□□□ -2.19
SIN3AQ96ST3 AC015726.2-201ENST00000620112 122 ntBASIC1.37□□□□□ -2.19
SIN3AQ96ST3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SIN3AQ96ST3 Y_RNA.7-201ENST00000362352 102 ntBASIC1.36□□□□□ -2.19
SIN3AQ96ST3 Y_RNA.66-201ENST00000362862 102 ntBASIC1.36□□□□□ -2.19
SIN3AQ96ST3 Y_RNA.91-201ENST00000363042 107 ntBASIC1.36□□□□□ -2.19
SIN3AQ96ST3 SNORD45.3-201ENST00000363836 72 ntBASIC1.36□□□□□ -2.19
SIN3AQ96ST3 Y_RNA.571-201ENST00000384753 98 ntBASIC1.36□□□□□ -2.19
SIN3AQ96ST3 MIR548A2-201ENST00000384956 97 ntBASIC1.36□□□□□ -2.19
SIN3AQ96ST3 RNU6-918P-201ENST00000391219 106 ntBASIC1.36□□□□□ -2.19
SIN3AQ96ST3 MIR548O-201ENST00000408583 114 ntBASIC1.36□□□□□ -2.19
SIN3AQ96ST3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.36□□□□□ -2.19
SIN3AQ96ST3 RNU4-57P-201ENST00000515980 135 ntBASIC1.36□□□□□ -2.19
SIN3AQ96ST3 RNU6-1299P-201ENST00000516316 100 ntBASIC1.36□□□□□ -2.19
SIN3AQ96ST3 SNORD111.1-201ENST00000516421 86 ntBASIC1.36□□□□□ -2.19
SIN3AQ96ST3 AC007751.1-201ENST00000529260 376 ntBASIC1.36□□□□□ -2.19
SIN3AQ96ST3 MIR4744-201ENST00000581563 82 ntBASIC1.36□□□□□ -2.19
SIN3AQ96ST3 AC097639.2-201ENST00000603159 172 ntBASIC1.36□□□□□ -2.19
SIN3AQ96ST3 AL357312.1-201ENST00000603879 298 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms