Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 SNORA19.2-201ENST00000516013 114 ntBASIC-1.47□□□□□ -2.64
IFT140Q96RY7 AC245014.2-201ENST00000603689 287 ntBASIC-1.47□□□□□ -2.64
IFT140Q96RY7 uc_338.10-201ENST00000621872 182 ntBASIC-1.47□□□□□ -2.64
IFT140Q96RY7 MIR365A-201ENST00000362260 87 ntBASIC-1.48□□□□□ -2.65
IFT140Q96RY7 MIR181B2-201ENST00000385004 89 ntBASIC-1.48□□□□□ -2.65
IFT140Q96RY7 SNORA40.5-201ENST00000391061 128 ntBASIC-1.48□□□□□ -2.65
IFT140Q96RY7 AL031003.1-201ENST00000404229 172 ntBASIC-1.48□□□□□ -2.65
IFT140Q96RY7 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.48□□□□□ -2.65
IFT140Q96RY7 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.48□□□□□ -2.65
IFT140Q96RY7 SNORD38.3-201ENST00000516599 73 ntBASIC-1.48□□□□□ -2.65
IFT140Q96RY7 RNY1P16-201ENST00000363063 111 ntBASIC-1.49□□□□□ -2.65
IFT140Q96RY7 RNU6-24P-201ENST00000384440 107 ntBASIC-1.49□□□□□ -2.65
IFT140Q96RY7 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.49□□□□□ -2.65
IFT140Q96RY7 EIF1P2-201ENST00000428233 350 ntBASIC-1.49□□□□□ -2.65
IFT140Q96RY7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.49□□□□□ -2.65
IFT140Q96RY7 ACA59.1-201ENST00000515966 143 ntBASIC-1.49□□□□□ -2.65
IFT140Q96RY7 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.49□□□□□ -2.65
IFT140Q96RY7 MIR5696-201ENST00000578474 85 ntBASIC-1.49□□□□□ -2.65
IFT140Q96RY7 AP000240.1-201ENST00000609910 452 ntBASIC-1.49□□□□□ -2.65
IFT140Q96RY7 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 RNU6-181P-201ENST00000363225 107 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 RNU2-61P-201ENST00000411069 191 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.5□□□□□ -2.65
IFT140Q96RY7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.5□□□□□ -2.65
IFT140Q96RY7 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 RNU6-445P-201ENST00000516949 107 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 DEFB131E-201ENST00000532329 154 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 MIR4424-201ENST00000585257 86 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 RNU6-86P-201ENST00000606534 107 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 MIR7844-201ENST00000616161 122 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 uc_338.19-201ENST00000616808 99 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 AC022960.3-201ENST00000619794 441 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 RNU6-500P-201ENST00000362349 107 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 RNU6-502P-201ENST00000362419 108 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 RNA5SP403-201ENST00000363598 108 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 RNU6-702P-201ENST00000364982 107 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 RNU6-996P-201ENST00000365438 107 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 SNORA27-201ENST00000384323 126 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 RNU6-601P-201ENST00000384540 107 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 RNU2-72P-201ENST00000411175 163 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.5□□□□□ -2.65
IFT140Q96RY7 CHEK2P4-201ENST00000450340 246 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.5□□□□□ -2.65
IFT140Q96RY7 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 RPS29P24-201ENST00000486345 171 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 RNU7-116P-201ENST00000516940 62 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 MIR5188-201ENST00000583467 113 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 MIR6851-201ENST00000617060 67 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 U4.2-201ENST00000618561 85 ntBASIC-1.5□□□□□ -2.65
IFT140Q96RY7 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.51□□□□□ -2.65
IFT140Q96RY7 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.51□□□□□ -2.65
IFT140Q96RY7 SNORD56B-201ENST00000384713 71 ntBASIC-1.51□□□□□ -2.65
IFT140Q96RY7 MIR548O-201ENST00000408583 114 ntBASIC-1.51□□□□□ -2.65
IFT140Q96RY7 RNU6-274P-201ENST00000459566 107 ntBASIC-1.51□□□□□ -2.65
IFT140Q96RY7 AC141846.1-201ENST00000568348 142 ntBASIC-1.51□□□□□ -2.65
IFT140Q96RY7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.51□□□□□ -2.65
IFT140Q96RY7 AC004467.1-201ENST00000615678 330 ntBASIC-1.51□□□□□ -2.65
IFT140Q96RY7 AL138960.2-201ENST00000625145 535 ntBASIC-1.51□□□□□ -2.65
IFT140Q96RY7 SNORD114-29-201ENST00000364819 70 ntBASIC-1.52□□□□□ -2.65
IFT140Q96RY7 RNU6-900P-201ENST00000384498 102 ntBASIC-1.52□□□□□ -2.65
IFT140Q96RY7 SNORD77.3-201ENST00000391113 65 ntBASIC-1.52□□□□□ -2.65
IFT140Q96RY7 MIR548I3-201ENST00000408378 149 ntBASIC-1.52□□□□□ -2.65
IFT140Q96RY7 RNU4-55P-201ENST00000410731 137 ntBASIC-1.52□□□□□ -2.65
IFT140Q96RY7 MTND1P14-201ENST00000427400 950 ntBASIC-1.52□□□□□ -2.65
IFT140Q96RY7 AC084290.1-201ENST00000434995 374 ntBASIC-1.52□□□□□ -2.65
IFT140Q96RY7 AC073415.1-201ENST00000449240 153 ntBASIC-1.52□□□□□ -2.65
IFT140Q96RY7 RPL30P15-201ENST00000457129 321 ntBASIC-1.52□□□□□ -2.65
IFT140Q96RY7 MIR4473-201ENST00000583731 91 ntBASIC-1.52□□□□□ -2.65
IFT140Q96RY7 AC245884.10-201ENST00000597355 337 ntBASIC-1.52□□□□□ -2.65
IFT140Q96RY7 AC091931.1-201ENST00000623488 728 ntBASIC-1.52□□□□□ -2.65
IFT140Q96RY7 MTND5P18-201ENST00000445624 1801 ntBASIC-1.52□□□□□ -2.65
IFT140Q96RY7 RNU6-879P-201ENST00000364328 108 ntBASIC-1.53□□□□□ -2.65
IFT140Q96RY7 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.53□□□□□ -2.65
IFT140Q96RY7 RNU6-721P-201ENST00000410155 105 ntBASIC-1.53□□□□□ -2.65
IFT140Q96RY7 BX295541.1-201ENST00000417774 250 ntBASIC-1.53□□□□□ -2.65
IFT140Q96RY7 RNU7-63P-201ENST00000459054 62 ntBASIC-1.53□□□□□ -2.65
IFT140Q96RY7 SNORA40.9-201ENST00000515895 93 ntBASIC-1.53□□□□□ -2.65
IFT140Q96RY7 RNU6-531P-201ENST00000516694 104 ntBASIC-1.53□□□□□ -2.65
IFT140Q96RY7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.53□□□□□ -2.65
IFT140Q96RY7 MIR3179-1-201ENST00000578940 84 ntBASIC-1.53□□□□□ -2.65
IFT140Q96RY7 MIR3179-2-201ENST00000579107 84 ntBASIC-1.53□□□□□ -2.65
IFT140Q96RY7 MIR3179-3-201ENST00000579566 84 ntBASIC-1.53□□□□□ -2.65
IFT140Q96RY7 MIR2681-201ENST00000581814 105 ntBASIC-1.53□□□□□ -2.65
IFT140Q96RY7 AC092954.2-201ENST00000609103 430 ntBASIC-1.53□□□□□ -2.65
IFT140Q96RY7 AP001506.1-201ENST00000615444 211 ntBASIC-1.53□□□□□ -2.65
IFT140Q96RY7 MIR3179-4-201ENST00000617599 84 ntBASIC-1.53□□□□□ -2.65
IFT140Q96RY7 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.54□□□□□ -2.66
IFT140Q96RY7 RNU6-949P-201ENST00000384040 107 ntBASIC-1.54□□□□□ -2.66
IFT140Q96RY7 MIR626-201ENST00000385032 94 ntBASIC-1.54□□□□□ -2.66
IFT140Q96RY7 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.54□□□□□ -2.66
IFT140Q96RY7 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.54□□□□□ -2.66
IFT140Q96RY7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.54□□□□□ -2.66
IFT140Q96RY7 RNU6-175P-201ENST00000516896 107 ntBASIC-1.54□□□□□ -2.66
IFT140Q96RY7 MIR4499-201ENST00000584834 69 ntBASIC-1.54□□□□□ -2.66
IFT140Q96RY7 MIR548AB-201ENST00000584917 84 ntBASIC-1.54□□□□□ -2.66
IFT140Q96RY7 RNU4-58P-201ENST00000363192 141 ntBASIC-1.55□□□□□ -2.66
IFT140Q96RY7 RNU4-16P-201ENST00000364737 141 ntBASIC-1.55□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms