Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 Y_RNA.521-201ENST00000384560 114 ntBASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 RNU6-296P-201ENST00000384608 107 ntBASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 MIR520A-201ENST00000384862 85 ntBASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 MIR517C-201ENST00000385103 95 ntBASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 SNORA79-201ENST00000408376 140 ntBASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 RNU2-70P-201ENST00000410718 179 ntBASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 HSPE1P24-201ENST00000450782 238 ntBASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 AC009474.2-201ENST00000451383 136 ntBASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 SNORD116-25-201ENST00000516517 92 ntBASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 SNORA31.17-201ENST00000516953 127 ntBASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 Y_RNA.634-201ENST00000364811 113 ntBASIC1.3□□□□□ -2.2
FOXN4Q96NZ1 Y_RNA.337-201ENST00000365312 102 ntBASIC1.3□□□□□ -2.2
FOXN4Q96NZ1 RNU6-1336P-201ENST00000383886 109 ntBASIC1.3□□□□□ -2.2
FOXN4Q96NZ1 RNU6-768P-201ENST00000384683 107 ntBASIC1.3□□□□□ -2.2
FOXN4Q96NZ1 Y_RNA.580-201ENST00000391004 95 ntBASIC1.3□□□□□ -2.2
FOXN4Q96NZ1 RNU1-78P-201ENST00000391248 165 ntBASIC1.3□□□□□ -2.2
FOXN4Q96NZ1 RN7SKP200-201ENST00000410564 320 ntBASIC1.3□□□□□ -2.2
FOXN4Q96NZ1 RNU4-43P-201ENST00000410628 137 ntBASIC1.3□□□□□ -2.2
FOXN4Q96NZ1 AC069257.2-201ENST00000441819 155 ntBASIC1.3□□□□□ -2.2
FOXN4Q96NZ1 RNU7-34P-201ENST00000459394 64 ntBASIC1.3□□□□□ -2.2
FOXN4Q96NZ1 RNA5SP272-201ENST00000516095 111 ntBASIC1.3□□□□□ -2.2
FOXN4Q96NZ1 RNA5SP61-201ENST00000516453 100 ntBASIC1.3□□□□□ -2.2
FOXN4Q96NZ1 RNU6-197P-201ENST00000516680 100 ntBASIC1.3□□□□□ -2.2
FOXN4Q96NZ1 Y_RNA.703-201ENST00000516846 111 ntBASIC1.3□□□□□ -2.2
FOXN4Q96NZ1 AC008507.4-201ENST00000585464 127 ntBASIC1.3□□□□□ -2.2
FOXN4Q96NZ1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.3□□□□□ -2.2
FOXN4Q96NZ1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.3□□□□□ -2.2
FOXN4Q96NZ1 RNU6-414P-201ENST00000363705 104 ntBASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 RNU4-11P-201ENST00000365287 132 ntBASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 SNORD37.2-201ENST00000391075 66 ntBASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 RNA5SP482-201ENST00000391269 118 ntBASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 RNU2-55P-201ENST00000411146 174 ntBASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 CALM2P4-201ENST00000430810 426 ntBASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 FTH1P12-201ENST00000432137 551 ntBASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 Y_RNA.666-201ENST00000516187 112 ntBASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 RNU7-121P-201ENST00000516604 62 ntBASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 SNORD45.4-201ENST00000516629 73 ntBASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 RNU1-92P-201ENST00000517017 135 ntBASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 Y_RNA.714-201ENST00000517065 90 ntBASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 MIR378D2-201ENST00000580636 98 ntBASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 DNAJC19P2-201ENST00000593340 302 ntBASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 Y_RNA.778-201ENST00000620203 90 ntBASIC1.29□□□□□ -2.2
FOXN4Q96NZ1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 RNU6-1138P-201ENST00000365359 106 ntBASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 Y_RNA.400-201ENST00000383963 111 ntBASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 MIR802-201ENST00000390235 94 ntBASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 U8.16-201ENST00000391279 133 ntBASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 MIR1267-201ENST00000408723 78 ntBASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 RNU6-588P-201ENST00000410281 105 ntBASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 RNU4-61P-201ENST00000411243 107 ntBASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 AC114811.1-201ENST00000507207 168 ntBASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 RNU7-28P-201ENST00000516759 62 ntBASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 MIR4762-201ENST00000585261 75 ntBASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 AC120024.3-201ENST00000603167 156 ntBASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 MTND1P7-201ENST00000632801 297 ntBASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 ZNF209P-201ENST00000593450 2304 ntBASIC1.28□□□□□ -2.2
FOXN4Q96NZ1 MIRLET7C-201ENST00000362160 84 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 RNU6-199P-201ENST00000362954 107 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 RNY1P10-201ENST00000363268 113 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 SNORA7.1-201ENST00000363750 139 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 RNY1P11-201ENST00000363759 113 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 SNORD14E-201ENST00000364009 85 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 Y_RNA.215-201ENST00000364204 112 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 Y_RNA.226-201ENST00000364337 114 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 U8.5-201ENST00000364528 136 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 RNU6-1082P-201ENST00000364574 107 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 snoU2-30.1-201ENST00000365012 70 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 RNY1P5-201ENST00000383890 115 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 SNORD26-201ENST00000384147 75 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 RNU6-163P-201ENST00000384396 106 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 AL034345.1-201ENST00000407768 123 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 AC004965.1-201ENST00000413033 213 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 SNRPGP13-201ENST00000442212 177 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 snoU13.27-201ENST00000459278 104 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 AC099513.1-201ENST00000490423 301 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 RNA5SP445-201ENST00000515889 115 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 SNORA25.12-201ENST00000516202 82 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 RNA5SP153-201ENST00000516498 76 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 RNA5SP168-201ENST00000516642 112 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 RNU6-365P-201ENST00000517113 106 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 RNU6-1270P-201ENST00000517128 108 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 SNORA31.24-201ENST00000517232 57 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 MIR4709-201ENST00000577272 72 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 MIR4662B-201ENST00000579498 81 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 SNORA28-201ENST00000606769 126 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 AC021506.2-201ENST00000612354 169 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 212.3 ms