Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
CNTNAP3BQ96NU0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.19□□□□□ -1.9
CNTNAP3BQ96NU0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.19□□□□□ -1.9
CNTNAP3BQ96NU0 AC062016.1-201ENST00000355719 319 ntBASIC3.19□□□□□ -1.9
CNTNAP3BQ96NU0 Y_RNA.205-201ENST00000364128 113 ntBASIC3.19□□□□□ -1.9
CNTNAP3BQ96NU0 MIR34C-201ENST00000384831 77 ntBASIC3.19□□□□□ -1.9
CNTNAP3BQ96NU0 MIR764-201ENST00000390811 85 ntBASIC3.19□□□□□ -1.9
CNTNAP3BQ96NU0 SNORA26.6-201ENST00000391256 115 ntBASIC3.19□□□□□ -1.9
CNTNAP3BQ96NU0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.19□□□□□ -1.9
CNTNAP3BQ96NU0 RN7SL863P-201ENST00000462370 296 ntBASIC3.19□□□□□ -1.9
CNTNAP3BQ96NU0 RN7SKP132-201ENST00000516001 208 ntBASIC3.19□□□□□ -1.9
CNTNAP3BQ96NU0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.19□□□□□ -1.9
CNTNAP3BQ96NU0 MIR3152-201ENST00000579801 74 ntBASIC3.19□□□□□ -1.9
CNTNAP3BQ96NU0 uc_338.25-201ENST00000613756 156 ntBASIC3.19□□□□□ -1.9
CNTNAP3BQ96NU0 AP003355.3-201ENST00000623465 114 ntBASIC3.19□□□□□ -1.9
CNTNAP3BQ96NU0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CNTNAP3BQ96NU0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CNTNAP3BQ96NU0 ICE2P2-201ENST00000483823 2787 ntBASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 MIRLET7A1-201ENST00000362295 80 ntBASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 Y_RNA.99-201ENST00000363138 105 ntBASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 U8.2-201ENST00000363156 134 ntBASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 RNA5SP99-201ENST00000364020 114 ntBASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 SNORA32-201ENST00000384072 121 ntBASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 MIR548G-201ENST00000408442 89 ntBASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 MIR1287-201ENST00000408492 90 ntBASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 EEF1A1P41-201ENST00000414667 207 ntBASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 RNU7-34P-201ENST00000459394 64 ntBASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 RNU6-557P-201ENST00000516842 110 ntBASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 RNU6-667P-201ENST00000517186 102 ntBASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CNTNAP3BQ96NU0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
CNTNAP3BQ96NU0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.17□□□□□ -1.9
CNTNAP3BQ96NU0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CNTNAP3BQ96NU0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CNTNAP3BQ96NU0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CNTNAP3BQ96NU0 AL591806.2-201ENST00000433122 173 ntBASIC3.17□□□□□ -1.9
CNTNAP3BQ96NU0 AC087499.7-201ENST00000441958 109 ntBASIC3.17□□□□□ -1.9
CNTNAP3BQ96NU0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.17□□□□□ -1.9
CNTNAP3BQ96NU0 RN7SL636P-201ENST00000497504 294 ntBASIC3.17□□□□□ -1.9
CNTNAP3BQ96NU0 RNU6-1041P-201ENST00000516254 102 ntBASIC3.17□□□□□ -1.9
CNTNAP3BQ96NU0 IGLV3-17-201ENST00000519099 244 ntBASIC3.17□□□□□ -1.9
CNTNAP3BQ96NU0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.17□□□□□ -1.9
CNTNAP3BQ96NU0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.17□□□□□ -1.9
CNTNAP3BQ96NU0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 Y_RNA.173-201ENST00000363776 113 ntBASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 SNORA25.6-201ENST00000364121 118 ntBASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 MIR206-201ENST00000384872 86 ntBASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 MIR592-201ENST00000384959 97 ntBASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 RNA5SP323-201ENST00000391094 133 ntBASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 RNA5SP482-201ENST00000391269 118 ntBASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 MTND4LP19-201ENST00000403051 166 ntBASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 MIR1236-201ENST00000408340 102 ntBASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 RN7SKP111-201ENST00000410349 271 ntBASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 RPS29P28-201ENST00000446439 141 ntBASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 AC024995.1-201ENST00000523014 93 ntBASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 RNU6-90P-201ENST00000606352 106 ntBASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 AL449363.1-201ENST00000617815 186 ntBASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CNTNAP3BQ96NU0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
CNTNAP3BQ96NU0 RNU6-283P-201ENST00000364788 107 ntBASIC3.15□□□□□ -1.91
CNTNAP3BQ96NU0 SNORD21-201ENST00000383953 95 ntBASIC3.15□□□□□ -1.91
CNTNAP3BQ96NU0 Y_RNA.508-201ENST00000384502 114 ntBASIC3.15□□□□□ -1.91
CNTNAP3BQ96NU0 SNORA8-201ENST00000384574 139 ntBASIC3.15□□□□□ -1.91
CNTNAP3BQ96NU0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CNTNAP3BQ96NU0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.15□□□□□ -1.91
CNTNAP3BQ96NU0 RNU6-826P-201ENST00000516827 104 ntBASIC3.15□□□□□ -1.91
CNTNAP3BQ96NU0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.15□□□□□ -1.91
CNTNAP3BQ96NU0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.15□□□□□ -1.91
CNTNAP3BQ96NU0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CNTNAP3BQ96NU0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.15□□□□□ -1.91
CNTNAP3BQ96NU0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CNTNAP3BQ96NU0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CNTNAP3BQ96NU0 RNU6-160P-201ENST00000384591 107 ntBASIC3.14□□□□□ -1.91
CNTNAP3BQ96NU0 MIR181B2-201ENST00000385004 89 ntBASIC3.14□□□□□ -1.91
CNTNAP3BQ96NU0 RNU6-220P-201ENST00000390919 107 ntBASIC3.14□□□□□ -1.91
CNTNAP3BQ96NU0 AC022018.1-201ENST00000430685 241 ntBASIC3.14□□□□□ -1.91
CNTNAP3BQ96NU0 AC105272.1-201ENST00000438604 198 ntBASIC3.14□□□□□ -1.91
CNTNAP3BQ96NU0 AC245517.4-201ENST00000448601 281 ntBASIC3.14□□□□□ -1.91
CNTNAP3BQ96NU0 ATP5J2P3-201ENST00000451550 258 ntBASIC3.14□□□□□ -1.91
CNTNAP3BQ96NU0 RNU6-634P-201ENST00000459134 106 ntBASIC3.14□□□□□ -1.91
CNTNAP3BQ96NU0 RN7SL442P-201ENST00000473804 320 ntBASIC3.14□□□□□ -1.91
CNTNAP3BQ96NU0 AC008163.1-202ENST00000636004 2889 ntBASIC3.14□□□□□ -1.91
CNTNAP3BQ96NU0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CNTNAP3BQ96NU0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
CNTNAP3BQ96NU0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CNTNAP3BQ96NU0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CNTNAP3BQ96NU0 RNU6-686P-201ENST00000364839 107 ntBASIC3.13□□□□□ -1.91
CNTNAP3BQ96NU0 RNU2-59P-201ENST00000410482 191 ntBASIC3.13□□□□□ -1.91
CNTNAP3BQ96NU0 RN7SKP192-201ENST00000411291 327 ntBASIC3.13□□□□□ -1.91
CNTNAP3BQ96NU0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms