Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 Y_RNA.182-201ENST00000363880 111 ntBASIC1.79□□□□□ -2.12
CHMP4CQ96CF2 Y_RNA.274-201ENST00000364714 101 ntBASIC1.79□□□□□ -2.12
CHMP4CQ96CF2 SNORD41-201ENST00000386967 70 ntBASIC1.79□□□□□ -2.12
CHMP4CQ96CF2 SNORA67.5-201ENST00000391036 107 ntBASIC1.79□□□□□ -2.12
CHMP4CQ96CF2 SNORA67.6-201ENST00000391093 99 ntBASIC1.79□□□□□ -2.12
CHMP4CQ96CF2 MIR548O-201ENST00000408583 114 ntBASIC1.79□□□□□ -2.12
CHMP4CQ96CF2 SNRPGP13-201ENST00000442212 177 ntBASIC1.79□□□□□ -2.12
CHMP4CQ96CF2 RPL39P39-201ENST00000455840 151 ntBASIC1.79□□□□□ -2.12
CHMP4CQ96CF2 Y_RNA.666-201ENST00000516187 112 ntBASIC1.79□□□□□ -2.12
CHMP4CQ96CF2 RNA5SP153-201ENST00000516498 76 ntBASIC1.79□□□□□ -2.12
CHMP4CQ96CF2 RNU6-200P-201ENST00000364743 107 ntBASIC1.78□□□□□ -2.12
CHMP4CQ96CF2 RNU6-484P-201ENST00000384016 107 ntBASIC1.78□□□□□ -2.12
CHMP4CQ96CF2 RNU6-578P-201ENST00000390980 103 ntBASIC1.78□□□□□ -2.12
CHMP4CQ96CF2 Y_RNA.793-201ENST00000411222 111 ntBASIC1.78□□□□□ -2.12
CHMP4CQ96CF2 AL354695.1-201ENST00000427935 228 ntBASIC1.78□□□□□ -2.12
CHMP4CQ96CF2 AL138752.1-201ENST00000452964 351 ntBASIC1.78□□□□□ -2.12
CHMP4CQ96CF2 SNRPGP8-201ENST00000454064 226 ntBASIC1.78□□□□□ -2.12
CHMP4CQ96CF2 AC108729.3-201ENST00000513484 108 ntBASIC1.78□□□□□ -2.12
CHMP4CQ96CF2 RNU6-830P-201ENST00000516353 107 ntBASIC1.78□□□□□ -2.12
CHMP4CQ96CF2 SNORD111.1-201ENST00000516421 86 ntBASIC1.78□□□□□ -2.12
CHMP4CQ96CF2 RNU6-504P-201ENST00000516568 104 ntBASIC1.78□□□□□ -2.12
CHMP4CQ96CF2 RNU1-92P-201ENST00000517017 135 ntBASIC1.78□□□□□ -2.12
CHMP4CQ96CF2 SNORA74.3-201ENST00000517108 154 ntBASIC1.78□□□□□ -2.12
CHMP4CQ96CF2 AC109810.1-201ENST00000534066 224 ntBASIC1.78□□□□□ -2.12
CHMP4CQ96CF2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.78□□□□□ -2.12
CHMP4CQ96CF2 MIR3664-201ENST00000579074 99 ntBASIC1.78□□□□□ -2.12
CHMP4CQ96CF2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CHMP4CQ96CF2 Y_RNA.644-201ENST00000459006 113 ntBASIC1.77□□□□□ -2.13
CHMP4CQ96CF2 RNU6-947P-201ENST00000516264 106 ntBASIC1.77□□□□□ -2.13
CHMP4CQ96CF2 Y_RNA.674-201ENST00000516362 113 ntBASIC1.77□□□□□ -2.13
CHMP4CQ96CF2 RN7SKP88-201ENST00000516847 250 ntBASIC1.77□□□□□ -2.13
CHMP4CQ96CF2 AC108706.1-201ENST00000611053 297 ntBASIC1.77□□□□□ -2.13
CHMP4CQ96CF2 7SK.8-201ENST00000612110 250 ntBASIC1.77□□□□□ -2.13
CHMP4CQ96CF2 7SK.11-201ENST00000615477 250 ntBASIC1.77□□□□□ -2.13
CHMP4CQ96CF2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.77□□□□□ -2.13
CHMP4CQ96CF2 7SK.13-201ENST00000622040 250 ntBASIC1.77□□□□□ -2.13
CHMP4CQ96CF2 Y_RNA.634-201ENST00000364811 113 ntBASIC1.76□□□□□ -2.13
CHMP4CQ96CF2 RNU6-918P-201ENST00000391219 106 ntBASIC1.76□□□□□ -2.13
CHMP4CQ96CF2 SNORD123-201ENST00000459473 70 ntBASIC1.76□□□□□ -2.13
CHMP4CQ96CF2 RNU6-138P-201ENST00000515952 107 ntBASIC1.76□□□□□ -2.13
CHMP4CQ96CF2 RNU7-25P-201ENST00000516544 62 ntBASIC1.76□□□□□ -2.13
CHMP4CQ96CF2 SNORA31.24-201ENST00000517232 57 ntBASIC1.76□□□□□ -2.13
CHMP4CQ96CF2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.76□□□□□ -2.13
CHMP4CQ96CF2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CHMP4CQ96CF2 Y_RNA.91-201ENST00000363042 107 ntBASIC1.75□□□□□ -2.13
CHMP4CQ96CF2 RNU6-47P-201ENST00000383866 107 ntBASIC1.75□□□□□ -2.13
CHMP4CQ96CF2 SNORD24-201ENST00000383884 75 ntBASIC1.75□□□□□ -2.13
CHMP4CQ96CF2 Y_RNA.435-201ENST00000384095 112 ntBASIC1.75□□□□□ -2.13
CHMP4CQ96CF2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.75□□□□□ -2.13
CHMP4CQ96CF2 RNU6-693P-201ENST00000516134 107 ntBASIC1.75□□□□□ -2.13
CHMP4CQ96CF2 RNU6-561P-201ENST00000516222 102 ntBASIC1.75□□□□□ -2.13
CHMP4CQ96CF2 Y_RNA.676-201ENST00000516393 96 ntBASIC1.75□□□□□ -2.13
CHMP4CQ96CF2 RNU6-197P-201ENST00000516680 100 ntBASIC1.75□□□□□ -2.13
CHMP4CQ96CF2 RNU6-1270P-201ENST00000517128 108 ntBASIC1.75□□□□□ -2.13
CHMP4CQ96CF2 AC090425.1-201ENST00000610007 140 ntBASIC1.75□□□□□ -2.13
CHMP4CQ96CF2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CHMP4CQ96CF2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.75□□□□□ -2.13
CHMP4CQ96CF2 U8.1-201ENST00000362843 134 ntBASIC1.74□□□□□ -2.13
CHMP4CQ96CF2 SNORA1.2-201ENST00000365189 134 ntBASIC1.74□□□□□ -2.13
CHMP4CQ96CF2 Y_RNA.547-201ENST00000384654 119 ntBASIC1.74□□□□□ -2.13
CHMP4CQ96CF2 MIR520C-201ENST00000385005 87 ntBASIC1.74□□□□□ -2.13
CHMP4CQ96CF2 U8.17-201ENST00000391292 132 ntBASIC1.74□□□□□ -2.13
CHMP4CQ96CF2 RNU7-43P-201ENST00000516554 64 ntBASIC1.74□□□□□ -2.13
CHMP4CQ96CF2 AL160236.1-201ENST00000556317 195 ntBASIC1.74□□□□□ -2.13
CHMP4CQ96CF2 CYP3A52P-201ENST00000563326 91 ntBASIC1.74□□□□□ -2.13
CHMP4CQ96CF2 MIR4498-201ENST00000577599 66 ntBASIC1.74□□□□□ -2.13
CHMP4CQ96CF2 AL442644.1-201ENST00000454390 3105 ntBASIC1.74□□□□□ -2.13
CHMP4CQ96CF2 RNU6-275P-201ENST00000364910 107 ntBASIC1.73□□□□□ -2.13
CHMP4CQ96CF2 MIR320A-201ENST00000385302 82 ntBASIC1.73□□□□□ -2.13
CHMP4CQ96CF2 RNU4-43P-201ENST00000410628 137 ntBASIC1.73□□□□□ -2.13
CHMP4CQ96CF2 Y_RNA.700-201ENST00000516806 100 ntBASIC1.73□□□□□ -2.13
CHMP4CQ96CF2 AP002392.1-201ENST00000537692 208 ntBASIC1.73□□□□□ -2.13
CHMP4CQ96CF2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CHMP4CQ96CF2 Y_RNA.29-201ENST00000362570 113 ntBASIC1.72□□□□□ -2.13
CHMP4CQ96CF2 SNORD61-201ENST00000384252 73 ntBASIC1.72□□□□□ -2.13
CHMP4CQ96CF2 RNU7-181P-201ENST00000517234 74 ntBASIC1.72□□□□□ -2.13
CHMP4CQ96CF2 AC097639.2-201ENST00000603159 172 ntBASIC1.72□□□□□ -2.13
CHMP4CQ96CF2 AC072026.1-201ENST00000605023 201 ntBASIC1.72□□□□□ -2.13
CHMP4CQ96CF2 snoU13.31-201ENST00000607291 104 ntBASIC1.72□□□□□ -2.13
CHMP4CQ96CF2 AL512598.1-201ENST00000610158 273 ntBASIC1.72□□□□□ -2.13
CHMP4CQ96CF2 MIR8065-201ENST00000620577 100 ntBASIC1.72□□□□□ -2.13
CHMP4CQ96CF2 Y_RNA.4-201ENST00000362333 112 ntBASIC1.71□□□□□ -2.14
CHMP4CQ96CF2 Y_RNA.75-201ENST00000362927 97 ntBASIC1.71□□□□□ -2.14
CHMP4CQ96CF2 RNU6-888P-201ENST00000363010 101 ntBASIC1.71□□□□□ -2.14
CHMP4CQ96CF2 SNORD115-28-201ENST00000363931 81 ntBASIC1.71□□□□□ -2.14
CHMP4CQ96CF2 Y_RNA.233-201ENST00000364407 101 ntBASIC1.71□□□□□ -2.14
CHMP4CQ96CF2 RNU6-1318P-201ENST00000365389 103 ntBASIC1.71□□□□□ -2.14
CHMP4CQ96CF2 Y_RNA.412-201ENST00000384001 104 ntBASIC1.71□□□□□ -2.14
CHMP4CQ96CF2 RNU6-1067P-201ENST00000384752 107 ntBASIC1.71□□□□□ -2.14
CHMP4CQ96CF2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.71□□□□□ -2.14
CHMP4CQ96CF2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.71□□□□□ -2.14
CHMP4CQ96CF2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.71□□□□□ -2.14
CHMP4CQ96CF2 MIR4764-201ENST00000580680 88 ntBASIC1.71□□□□□ -2.14
CHMP4CQ96CF2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.71□□□□□ -2.14
CHMP4CQ96CF2 Y_RNA.66-201ENST00000362862 102 ntBASIC1.7□□□□□ -2.14
CHMP4CQ96CF2 MTND5P15-201ENST00000434246 349 ntBASIC1.7□□□□□ -2.14
CHMP4CQ96CF2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.7□□□□□ -2.14
CHMP4CQ96CF2 AC005840.1-201ENST00000498412 377 ntBASIC1.7□□□□□ -2.14
CHMP4CQ96CF2 RNU4-57P-201ENST00000515980 135 ntBASIC1.7□□□□□ -2.14
CHMP4CQ96CF2 MRPS18CP4-201ENST00000535821 231 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms