Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 FAM106DP-201ENST00000586416 501 ntBASIC1.33□□□□□ -2.2
SLC44A1Q8WWI5 MT-TT-201ENST00000387460 66 ntBASIC1.32□□□□□ -2.2
SLC44A1Q8WWI5 SNORA26-201ENST00000391286 122 ntBASIC1.32□□□□□ -2.2
SLC44A1Q8WWI5 RNY3P16-201ENST00000516338 101 ntBASIC1.32□□□□□ -2.2
SLC44A1Q8WWI5 RNA5SP153-201ENST00000516498 76 ntBASIC1.32□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-922P-201ENST00000516753 99 ntBASIC1.32□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-388P-201ENST00000517012 105 ntBASIC1.32□□□□□ -2.2
SLC44A1Q8WWI5 RNU1-92P-201ENST00000517017 135 ntBASIC1.32□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-389P-201ENST00000517048 105 ntBASIC1.32□□□□□ -2.2
SLC44A1Q8WWI5 MIR3664-201ENST00000579074 99 ntBASIC1.32□□□□□ -2.2
SLC44A1Q8WWI5 MIR4308-201ENST00000580634 81 ntBASIC1.32□□□□□ -2.2
SLC44A1Q8WWI5 AC078938.1-201ENST00000620993 318 ntBASIC1.32□□□□□ -2.2
SLC44A1Q8WWI5 ZNF209P-201ENST00000593450 2304 ntBASIC1.31□□□□□ -2.2
SLC44A1Q8WWI5 RNY1P10-201ENST00000363268 113 ntBASIC1.31□□□□□ -2.2
SLC44A1Q8WWI5 SNORD24-201ENST00000383884 75 ntBASIC1.31□□□□□ -2.2
SLC44A1Q8WWI5 Y_RNA.486-201ENST00000384398 107 ntBASIC1.31□□□□□ -2.2
SLC44A1Q8WWI5 MIR516B2-201ENST00000385190 85 ntBASIC1.31□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-493P-201ENST00000391321 108 ntBASIC1.31□□□□□ -2.2
SLC44A1Q8WWI5 RNU4-43P-201ENST00000410628 137 ntBASIC1.31□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-847P-201ENST00000411115 108 ntBASIC1.31□□□□□ -2.2
SLC44A1Q8WWI5 AC009474.2-201ENST00000451383 136 ntBASIC1.31□□□□□ -2.2
SLC44A1Q8WWI5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.31□□□□□ -2.2
SLC44A1Q8WWI5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.31□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-1299P-201ENST00000516316 100 ntBASIC1.31□□□□□ -2.2
SLC44A1Q8WWI5 SNORA74.3-201ENST00000517108 154 ntBASIC1.31□□□□□ -2.2
SLC44A1Q8WWI5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.31□□□□□ -2.2
SLC44A1Q8WWI5 MIR4744-201ENST00000581563 82 ntBASIC1.31□□□□□ -2.2
SLC44A1Q8WWI5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SLC44A1Q8WWI5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-923P-201ENST00000364753 107 ntBASIC1.3□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-728P-201ENST00000365375 104 ntBASIC1.3□□□□□ -2.2
SLC44A1Q8WWI5 Y_RNA.432-201ENST00000384087 111 ntBASIC1.3□□□□□ -2.2
SLC44A1Q8WWI5 Y_RNA.571-201ENST00000384753 98 ntBASIC1.3□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-918P-201ENST00000391219 106 ntBASIC1.3□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-321P-201ENST00000410912 106 ntBASIC1.3□□□□□ -2.2
SLC44A1Q8WWI5 SNRPGP8-201ENST00000454064 226 ntBASIC1.3□□□□□ -2.2
SLC44A1Q8WWI5 RNU1-123P-201ENST00000458950 160 ntBASIC1.3□□□□□ -2.2
SLC44A1Q8WWI5 AC005840.1-201ENST00000498412 377 ntBASIC1.3□□□□□ -2.2
SLC44A1Q8WWI5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.3□□□□□ -2.2
SLC44A1Q8WWI5 TRMT112P2-201ENST00000512910 132 ntBASIC1.3□□□□□ -2.2
SLC44A1Q8WWI5 Y_RNA.700-201ENST00000516806 100 ntBASIC1.3□□□□□ -2.2
SLC44A1Q8WWI5 AL359821.1-201ENST00000605519 182 ntBASIC1.3□□□□□ -2.2
SLC44A1Q8WWI5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SLC44A1Q8WWI5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SLC44A1Q8WWI5 SNORA7.1-201ENST00000363750 139 ntBASIC1.29□□□□□ -2.2
SLC44A1Q8WWI5 SNORD45.3-201ENST00000363836 72 ntBASIC1.29□□□□□ -2.2
SLC44A1Q8WWI5 Y_RNA.226-201ENST00000364337 114 ntBASIC1.29□□□□□ -2.2
SLC44A1Q8WWI5 Y_RNA.257-201ENST00000364596 102 ntBASIC1.29□□□□□ -2.2
SLC44A1Q8WWI5 Y_RNA.274-201ENST00000364714 101 ntBASIC1.29□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-200P-201ENST00000364743 107 ntBASIC1.29□□□□□ -2.2
SLC44A1Q8WWI5 Y_RNA.634-201ENST00000364811 113 ntBASIC1.29□□□□□ -2.2
SLC44A1Q8WWI5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-365P-201ENST00000517113 106 ntBASIC1.29□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-165P-201ENST00000517170 99 ntBASIC1.29□□□□□ -2.2
SLC44A1Q8WWI5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 Y_RNA.66-201ENST00000362862 102 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-888P-201ENST00000363010 101 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-1020P-201ENST00000363684 107 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-578P-201ENST00000390980 103 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 MIR1287-201ENST00000408492 90 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 MIR548O-201ENST00000408583 114 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 SNORD123-201ENST00000459473 70 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 AC004223.1-201ENST00000479840 271 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 RNU4-57P-201ENST00000515980 135 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 SNORD111.1-201ENST00000516421 86 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 RNU7-43P-201ENST00000516554 64 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-197P-201ENST00000516680 100 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 AC090821.2-201ENST00000523552 176 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 AC109810.1-201ENST00000534066 224 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 MIR4421-201ENST00000578133 69 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 RNU2-4P-201ENST00000606190 192 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 AC108706.1-201ENST00000611053 297 ntBASIC1.28□□□□□ -2.2
SLC44A1Q8WWI5 MIR26B-201ENST00000362251 77 ntBASIC1.27□□□□□ -2.21
SLC44A1Q8WWI5 Y_RNA.75-201ENST00000362927 97 ntBASIC1.27□□□□□ -2.21
SLC44A1Q8WWI5 RNU6-275P-201ENST00000364910 107 ntBASIC1.27□□□□□ -2.21
SLC44A1Q8WWI5 Y_RNA.297-201ENST00000364950 91 ntBASIC1.27□□□□□ -2.21
SLC44A1Q8WWI5 SNORD26-201ENST00000384147 75 ntBASIC1.27□□□□□ -2.21
SLC44A1Q8WWI5 RNU4-70P-201ENST00000384579 139 ntBASIC1.27□□□□□ -2.21
SLC44A1Q8WWI5 RNU2-70P-201ENST00000410718 179 ntBASIC1.27□□□□□ -2.21
SLC44A1Q8WWI5 Y_RNA.622-201ENST00000411091 108 ntBASIC1.27□□□□□ -2.21
SLC44A1Q8WWI5 Y_RNA.666-201ENST00000516187 112 ntBASIC1.27□□□□□ -2.21
SLC44A1Q8WWI5 RNU7-25P-201ENST00000516544 62 ntBASIC1.27□□□□□ -2.21
SLC44A1Q8WWI5 RNU6-504P-201ENST00000516568 104 ntBASIC1.27□□□□□ -2.21
SLC44A1Q8WWI5 SNORA18.7-201ENST00000516910 131 ntBASIC1.27□□□□□ -2.21
SLC44A1Q8WWI5 AC015726.2-201ENST00000620112 122 ntBASIC1.27□□□□□ -2.21
SLC44A1Q8WWI5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SLC44A1Q8WWI5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
SLC44A1Q8WWI5 Y_RNA.547-201ENST00000384654 119 ntBASIC1.26□□□□□ -2.21
SLC44A1Q8WWI5 MIR548A2-201ENST00000384956 97 ntBASIC1.26□□□□□ -2.21
SLC44A1Q8WWI5 AL138752.1-201ENST00000452964 351 ntBASIC1.26□□□□□ -2.21
SLC44A1Q8WWI5 Y_RNA.644-201ENST00000459006 113 ntBASIC1.26□□□□□ -2.21
SLC44A1Q8WWI5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.26□□□□□ -2.21
SLC44A1Q8WWI5 Y_RNA.797-201ENST00000515977 94 ntBASIC1.26□□□□□ -2.21
SLC44A1Q8WWI5 Y_RNA.674-201ENST00000516362 113 ntBASIC1.26□□□□□ -2.21
SLC44A1Q8WWI5 MIR3660-201ENST00000584845 100 ntBASIC1.26□□□□□ -2.21
SLC44A1Q8WWI5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms