Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RNU6-1299P-201ENST00000516316 100 ntBASIC1.55□□□□□ -2.16
HMGB4Q8WW32 RNU6-830P-201ENST00000516353 107 ntBASIC1.55□□□□□ -2.16
HMGB4Q8WW32 SNORA31.24-201ENST00000517232 57 ntBASIC1.55□□□□□ -2.16
HMGB4Q8WW32 AL512310.8-201ENST00000550183 120 ntBASIC1.55□□□□□ -2.16
HMGB4Q8WW32 MIR4744-201ENST00000581563 82 ntBASIC1.55□□□□□ -2.16
HMGB4Q8WW32 GHRLOS.1-201ENST00000610995 70 ntBASIC1.55□□□□□ -2.16
HMGB4Q8WW32 AL157834.3-201ENST00000615543 103 ntBASIC1.55□□□□□ -2.16
HMGB4Q8WW32 ZNF209P-201ENST00000593450 2304 ntBASIC1.55□□□□□ -2.16
HMGB4Q8WW32 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMGB4Q8WW32 Y_RNA.118-201ENST00000363300 101 ntBASIC1.54□□□□□ -2.16
HMGB4Q8WW32 SNORD45.3-201ENST00000363836 72 ntBASIC1.54□□□□□ -2.16
HMGB4Q8WW32 MIR15B-201ENST00000385045 98 ntBASIC1.54□□□□□ -2.16
HMGB4Q8WW32 RPL30P7-201ENST00000479312 323 ntBASIC1.54□□□□□ -2.16
HMGB4Q8WW32 RNU6-561P-201ENST00000516222 102 ntBASIC1.54□□□□□ -2.16
HMGB4Q8WW32 MIR3664-201ENST00000579074 99 ntBASIC1.54□□□□□ -2.16
HMGB4Q8WW32 AL121890.5-201ENST00000620848 304 ntBASIC1.54□□□□□ -2.16
HMGB4Q8WW32 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMGB4Q8WW32 RNU6-200P-201ENST00000364743 107 ntBASIC1.53□□□□□ -2.16
HMGB4Q8WW32 Y_RNA.297-201ENST00000364950 91 ntBASIC1.53□□□□□ -2.16
HMGB4Q8WW32 RNU6-47P-201ENST00000383866 107 ntBASIC1.53□□□□□ -2.16
HMGB4Q8WW32 Y_RNA.432-201ENST00000384087 111 ntBASIC1.53□□□□□ -2.16
HMGB4Q8WW32 Y_RNA.435-201ENST00000384095 112 ntBASIC1.53□□□□□ -2.16
HMGB4Q8WW32 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.53□□□□□ -2.16
HMGB4Q8WW32 RNU6-578P-201ENST00000390980 103 ntBASIC1.53□□□□□ -2.16
HMGB4Q8WW32 RNU6-847P-201ENST00000411115 108 ntBASIC1.53□□□□□ -2.16
HMGB4Q8WW32 Y_RNA.666-201ENST00000516187 112 ntBASIC1.53□□□□□ -2.16
HMGB4Q8WW32 RNA5SP153-201ENST00000516498 76 ntBASIC1.53□□□□□ -2.16
HMGB4Q8WW32 SNORA74.3-201ENST00000517108 154 ntBASIC1.53□□□□□ -2.16
HMGB4Q8WW32 RNU6-365P-201ENST00000517113 106 ntBASIC1.53□□□□□ -2.16
HMGB4Q8WW32 MIR4421-201ENST00000578133 69 ntBASIC1.53□□□□□ -2.16
HMGB4Q8WW32 AC097639.2-201ENST00000603159 172 ntBASIC1.53□□□□□ -2.16
HMGB4Q8WW32 AC108706.1-201ENST00000611053 297 ntBASIC1.53□□□□□ -2.16
HMGB4Q8WW32 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.17
HMGB4Q8WW32 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.52□□□□□ -2.17
HMGB4Q8WW32 RNU6-1020P-201ENST00000363684 107 ntBASIC1.52□□□□□ -2.17
HMGB4Q8WW32 Y_RNA.634-201ENST00000364811 113 ntBASIC1.52□□□□□ -2.17
HMGB4Q8WW32 RNU6-728P-201ENST00000365375 104 ntBASIC1.52□□□□□ -2.17
HMGB4Q8WW32 RNU4-70P-201ENST00000384579 139 ntBASIC1.52□□□□□ -2.17
HMGB4Q8WW32 RNU6-138P-201ENST00000515952 107 ntBASIC1.52□□□□□ -2.17
HMGB4Q8WW32 SNORA18.7-201ENST00000516910 131 ntBASIC1.52□□□□□ -2.17
HMGB4Q8WW32 AC109810.1-201ENST00000534066 224 ntBASIC1.52□□□□□ -2.17
HMGB4Q8WW32 AL160236.1-201ENST00000556317 195 ntBASIC1.52□□□□□ -2.17
HMGB4Q8WW32 AL357312.1-201ENST00000603879 298 ntBASIC1.52□□□□□ -2.17
HMGB4Q8WW32 Y_RNA.66-201ENST00000362862 102 ntBASIC1.51□□□□□ -2.17
HMGB4Q8WW32 Y_RNA.91-201ENST00000363042 107 ntBASIC1.51□□□□□ -2.17
HMGB4Q8WW32 SNORD24-201ENST00000383884 75 ntBASIC1.51□□□□□ -2.17
HMGB4Q8WW32 Y_RNA.508-201ENST00000384502 114 ntBASIC1.51□□□□□ -2.17
HMGB4Q8WW32 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
HMGB4Q8WW32 SNORA26-201ENST00000391286 122 ntBASIC1.51□□□□□ -2.17
HMGB4Q8WW32 MIR548O-201ENST00000408583 114 ntBASIC1.51□□□□□ -2.17
HMGB4Q8WW32 RNU4-43P-201ENST00000410628 137 ntBASIC1.51□□□□□ -2.17
HMGB4Q8WW32 RNU2-70P-201ENST00000410718 179 ntBASIC1.51□□□□□ -2.17
HMGB4Q8WW32 AL354695.1-201ENST00000427935 228 ntBASIC1.51□□□□□ -2.17
HMGB4Q8WW32 SNRPGP13-201ENST00000442212 177 ntBASIC1.51□□□□□ -2.17
HMGB4Q8WW32 Y_RNA.644-201ENST00000459006 113 ntBASIC1.51□□□□□ -2.17
HMGB4Q8WW32 Y_RNA.797-201ENST00000515977 94 ntBASIC1.51□□□□□ -2.17
HMGB4Q8WW32 Y_RNA.674-201ENST00000516362 113 ntBASIC1.51□□□□□ -2.17
HMGB4Q8WW32 RNU7-25P-201ENST00000516544 62 ntBASIC1.51□□□□□ -2.17
HMGB4Q8WW32 RNU6-165P-201ENST00000517170 99 ntBASIC1.51□□□□□ -2.17
HMGB4Q8WW32 AC015726.2-201ENST00000620112 122 ntBASIC1.51□□□□□ -2.17
HMGB4Q8WW32 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
HMGB4Q8WW32 Y_RNA.182-201ENST00000363880 111 ntBASIC1.5□□□□□ -2.17
HMGB4Q8WW32 RNU6-392P-201ENST00000364926 101 ntBASIC1.5□□□□□ -2.17
HMGB4Q8WW32 Y_RNA.547-201ENST00000384654 119 ntBASIC1.5□□□□□ -2.17
HMGB4Q8WW32 MIR548A2-201ENST00000384956 97 ntBASIC1.5□□□□□ -2.17
HMGB4Q8WW32 SNORD123-201ENST00000459473 70 ntBASIC1.5□□□□□ -2.17
HMGB4Q8WW32 RNU4-57P-201ENST00000515980 135 ntBASIC1.5□□□□□ -2.17
HMGB4Q8WW32 RNU6-197P-201ENST00000516680 100 ntBASIC1.5□□□□□ -2.17
HMGB4Q8WW32 AC007751.1-201ENST00000529260 376 ntBASIC1.5□□□□□ -2.17
HMGB4Q8WW32 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.5□□□□□ -2.17
HMGB4Q8WW32 Y_RNA.75-201ENST00000362927 97 ntBASIC1.49□□□□□ -2.17
HMGB4Q8WW32 Y_RNA.224-201ENST00000364308 111 ntBASIC1.49□□□□□ -2.17
HMGB4Q8WW32 RNU6-275P-201ENST00000364910 107 ntBASIC1.49□□□□□ -2.17
HMGB4Q8WW32 SNORD61-201ENST00000384252 73 ntBASIC1.49□□□□□ -2.17
HMGB4Q8WW32 MIR1304-201ENST00000408243 91 ntBASIC1.49□□□□□ -2.17
HMGB4Q8WW32 AL138752.1-201ENST00000452964 351 ntBASIC1.49□□□□□ -2.17
HMGB4Q8WW32 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.49□□□□□ -2.17
HMGB4Q8WW32 RNU6-504P-201ENST00000516568 104 ntBASIC1.49□□□□□ -2.17
HMGB4Q8WW32 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.48□□□□□ -2.17
HMGB4Q8WW32 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HMGB4Q8WW32 RNU6-888P-201ENST00000363010 101 ntBASIC1.48□□□□□ -2.17
HMGB4Q8WW32 Y_RNA.355-201ENST00000365462 98 ntBASIC1.48□□□□□ -2.17
HMGB4Q8WW32 Y_RNA.412-201ENST00000384001 104 ntBASIC1.48□□□□□ -2.17
HMGB4Q8WW32 MIR518F-201ENST00000384973 87 ntBASIC1.48□□□□□ -2.17
HMGB4Q8WW32 AL121914.1-201ENST00000450188 156 ntBASIC1.48□□□□□ -2.17
HMGB4Q8WW32 RNU6-693P-201ENST00000516134 107 ntBASIC1.48□□□□□ -2.17
HMGB4Q8WW32 SNORD111.1-201ENST00000516421 86 ntBASIC1.48□□□□□ -2.17
HMGB4Q8WW32 Y_RNA.700-201ENST00000516806 100 ntBASIC1.48□□□□□ -2.17
HMGB4Q8WW32 CYP3A52P-201ENST00000563326 91 ntBASIC1.48□□□□□ -2.17
HMGB4Q8WW32 AP001485.1-201ENST00000604799 199 ntBASIC1.48□□□□□ -2.17
HMGB4Q8WW32 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
HMGB4Q8WW32 U6.106-201ENST00000636360 105 ntBASIC1.48□□□□□ -2.17
HMGB4Q8WW32 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
HMGB4Q8WW32 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HMGB4Q8WW32 Y_RNA.233-201ENST00000364407 101 ntBASIC1.47□□□□□ -2.17
HMGB4Q8WW32 RNU6-1318P-201ENST00000365389 103 ntBASIC1.47□□□□□ -2.17
HMGB4Q8WW32 U8.17-201ENST00000391292 132 ntBASIC1.47□□□□□ -2.17
HMGB4Q8WW32 SNORA79-201ENST00000408376 140 ntBASIC1.47□□□□□ -2.17
HMGB4Q8WW32 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.47□□□□□ -2.17
HMGB4Q8WW32 RNU7-43P-201ENST00000516554 64 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms