Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 SNORA31.21-201ENST00000517180 77 ntBASIC3.17□□□□□ -1.9
NEDD1Q8NHV4 AP002004.2-201ENST00000531656 154 ntBASIC3.17□□□□□ -1.9
NEDD1Q8NHV4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NEDD1Q8NHV4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NEDD1Q8NHV4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NEDD1Q8NHV4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NEDD1Q8NHV4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NEDD1Q8NHV4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.16□□□□□ -1.9
NEDD1Q8NHV4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.16□□□□□ -1.9
NEDD1Q8NHV4 ICE2P2-201ENST00000483823 2787 ntBASIC3.16□□□□□ -1.9
NEDD1Q8NHV4 RNA5SP252-201ENST00000391131 119 ntBASIC3.16□□□□□ -1.9
NEDD1Q8NHV4 AC093729.1-201ENST00000513074 128 ntBASIC3.16□□□□□ -1.9
NEDD1Q8NHV4 SNORA9.3-201ENST00000516383 129 ntBASIC3.16□□□□□ -1.9
NEDD1Q8NHV4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NEDD1Q8NHV4 Y_RNA.336-201ENST00000365307 109 ntBASIC3.15□□□□□ -1.91
NEDD1Q8NHV4 SNORA80E-201ENST00000384744 137 ntBASIC3.15□□□□□ -1.91
NEDD1Q8NHV4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NEDD1Q8NHV4 RNU6-1307P-201ENST00000391012 103 ntBASIC3.15□□□□□ -1.91
NEDD1Q8NHV4 RNU11-5P-201ENST00000391216 129 ntBASIC3.15□□□□□ -1.91
NEDD1Q8NHV4 RPL31P63-201ENST00000422565 375 ntBASIC3.15□□□□□ -1.91
NEDD1Q8NHV4 RNU7-96P-201ENST00000459535 64 ntBASIC3.15□□□□□ -1.91
NEDD1Q8NHV4 RPS29P12-201ENST00000460178 152 ntBASIC3.15□□□□□ -1.91
NEDD1Q8NHV4 RPL23AP94-201ENST00000512518 302 ntBASIC3.15□□□□□ -1.91
NEDD1Q8NHV4 AC020891.4-201ENST00000605745 93 ntBASIC3.15□□□□□ -1.91
NEDD1Q8NHV4 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.15□□□□□ -1.91
NEDD1Q8NHV4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
NEDD1Q8NHV4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
NEDD1Q8NHV4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
NEDD1Q8NHV4 AL442644.1-201ENST00000454390 3105 ntBASIC3.14□□□□□ -1.91
NEDD1Q8NHV4 RNU6-478P-201ENST00000363904 110 ntBASIC3.14□□□□□ -1.91
NEDD1Q8NHV4 RNA5SP344-201ENST00000411081 104 ntBASIC3.14□□□□□ -1.91
NEDD1Q8NHV4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.14□□□□□ -1.91
NEDD1Q8NHV4 AL161932.1-201ENST00000437408 146 ntBASIC3.14□□□□□ -1.91
NEDD1Q8NHV4 AL031183.1-201ENST00000457667 207 ntBASIC3.14□□□□□ -1.91
NEDD1Q8NHV4 RNA5SP112-201ENST00000515937 99 ntBASIC3.14□□□□□ -1.91
NEDD1Q8NHV4 AC007536.1-201ENST00000533382 349 ntBASIC3.14□□□□□ -1.91
NEDD1Q8NHV4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.14□□□□□ -1.91
NEDD1Q8NHV4 MIR6841-201ENST00000637129 72 ntBASIC3.14□□□□□ -1.91
NEDD1Q8NHV4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NEDD1Q8NHV4 RNU6-315P-201ENST00000362666 107 ntBASIC3.13□□□□□ -1.91
NEDD1Q8NHV4 RNU6-1244P-201ENST00000363614 108 ntBASIC3.13□□□□□ -1.91
NEDD1Q8NHV4 Y_RNA.241-201ENST00000364470 117 ntBASIC3.13□□□□□ -1.91
NEDD1Q8NHV4 MIR519C-201ENST00000385053 87 ntBASIC3.13□□□□□ -1.91
NEDD1Q8NHV4 SNORD77B-201ENST00000391112 67 ntBASIC3.13□□□□□ -1.91
NEDD1Q8NHV4 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.13□□□□□ -1.91
NEDD1Q8NHV4 RNU6-991P-201ENST00000516168 107 ntBASIC3.13□□□□□ -1.91
NEDD1Q8NHV4 RNU6-1041P-201ENST00000516254 102 ntBASIC3.13□□□□□ -1.91
NEDD1Q8NHV4 RNA5SP33-201ENST00000516687 98 ntBASIC3.13□□□□□ -1.91
NEDD1Q8NHV4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.13□□□□□ -1.91
NEDD1Q8NHV4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.13□□□□□ -1.91
NEDD1Q8NHV4 MIR196B-201ENST00000384852 84 ntBASIC3.12□□□□□ -1.91
NEDD1Q8NHV4 RNU6-1319P-201ENST00000390855 104 ntBASIC3.12□□□□□ -1.91
NEDD1Q8NHV4 RNU6-747P-201ENST00000390928 104 ntBASIC3.12□□□□□ -1.91
NEDD1Q8NHV4 RNU6-241P-201ENST00000391148 104 ntBASIC3.12□□□□□ -1.91
NEDD1Q8NHV4 RNU2-48P-201ENST00000410694 191 ntBASIC3.12□□□□□ -1.91
NEDD1Q8NHV4 RNU6-177P-201ENST00000411257 104 ntBASIC3.12□□□□□ -1.91
NEDD1Q8NHV4 SCARNA17.1-201ENST00000516211 143 ntBASIC3.12□□□□□ -1.91
NEDD1Q8NHV4 SCARNA17.2-201ENST00000516334 143 ntBASIC3.12□□□□□ -1.91
NEDD1Q8NHV4 RNA5SP282-201ENST00000516355 108 ntBASIC3.12□□□□□ -1.91
NEDD1Q8NHV4 RNU6-539P-201ENST00000516665 103 ntBASIC3.12□□□□□ -1.91
NEDD1Q8NHV4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.12□□□□□ -1.91
NEDD1Q8NHV4 SCARNA17.4-201ENST00000614296 143 ntBASIC3.12□□□□□ -1.91
NEDD1Q8NHV4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.12□□□□□ -1.91
NEDD1Q8NHV4 RNU6-546P-201ENST00000383991 107 ntBASIC3.11□□□□□ -1.91
NEDD1Q8NHV4 MIR1265-201ENST00000408444 86 ntBASIC3.11□□□□□ -1.91
NEDD1Q8NHV4 RNU2-63P-201ENST00000410792 194 ntBASIC3.11□□□□□ -1.91
NEDD1Q8NHV4 AC090821.2-201ENST00000523552 176 ntBASIC3.11□□□□□ -1.91
NEDD1Q8NHV4 MIR3124-201ENST00000582636 67 ntBASIC3.11□□□□□ -1.91
NEDD1Q8NHV4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NEDD1Q8NHV4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NEDD1Q8NHV4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NEDD1Q8NHV4 Y_RNA.57-201ENST00000362806 113 ntBASIC3.1□□□□□ -1.91
NEDD1Q8NHV4 MIR887-201ENST00000401258 79 ntBASIC3.1□□□□□ -1.91
NEDD1Q8NHV4 AL445685.2-201ENST00000422551 342 ntBASIC3.1□□□□□ -1.91
NEDD1Q8NHV4 AC114811.1-201ENST00000507207 168 ntBASIC3.1□□□□□ -1.91
NEDD1Q8NHV4 RNU6-917P-201ENST00000516294 104 ntBASIC3.1□□□□□ -1.91
NEDD1Q8NHV4 RNU1-142P-201ENST00000516682 145 ntBASIC3.1□□□□□ -1.91
NEDD1Q8NHV4 SNORA31.26-201ENST00000517250 137 ntBASIC3.1□□□□□ -1.91
NEDD1Q8NHV4 AL353149.1-201ENST00000610667 244 ntBASIC3.1□□□□□ -1.91
NEDD1Q8NHV4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NEDD1Q8NHV4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NEDD1Q8NHV4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 MAPK10-266ENST00000641066 6555 ntBASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 SNORD115-34-201ENST00000362441 82 ntBASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 SNORD115-12-201ENST00000362583 82 ntBASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 SNORD115-29-201ENST00000362834 82 ntBASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 SNORD115-9-201ENST00000362912 82 ntBASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 SNORD115-21-201ENST00000362963 81 ntBASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 SNORD115-14-201ENST00000363090 81 ntBASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 SNORD115-41-201ENST00000363608 82 ntBASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 SNORD115-11-201ENST00000363616 82 ntBASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 SNORD115-5-201ENST00000363633 82 ntBASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 SNORD115-39-201ENST00000363694 82 ntBASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 SNORD115-4-201ENST00000363810 82 ntBASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 SNORD38.1-201ENST00000363863 68 ntBASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 RNA5SP68-201ENST00000363885 119 ntBASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 SNORD115-6-201ENST00000363942 82 ntBASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 SNORD115-42-201ENST00000364273 82 ntBASIC3.09□□□□□ -1.91
NEDD1Q8NHV4 SNORD115-15-201ENST00000364809 81 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms