Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AL356379.1-201ENST00000414105 126 ntBASIC2.12□□□□□ -2.07
SIMC1Q8NDZ2 FTH1P12-201ENST00000432137 551 ntBASIC2.12□□□□□ -2.07
SIMC1Q8NDZ2 Y_RNA.649-201ENST00000459077 103 ntBASIC2.12□□□□□ -2.07
SIMC1Q8NDZ2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.12□□□□□ -2.07
SIMC1Q8NDZ2 MIR4299-201ENST00000577899 72 ntBASIC2.12□□□□□ -2.07
SIMC1Q8NDZ2 MIR5094-201ENST00000578766 85 ntBASIC2.12□□□□□ -2.07
SIMC1Q8NDZ2 MIR5007-201ENST00000583098 95 ntBASIC2.12□□□□□ -2.07
SIMC1Q8NDZ2 MIR6766-201ENST00000622641 72 ntBASIC2.12□□□□□ -2.07
SIMC1Q8NDZ2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SIMC1Q8NDZ2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
SIMC1Q8NDZ2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
SIMC1Q8NDZ2 SNORD114-1-201ENST00000362705 72 ntBASIC2.11□□□□□ -2.07
SIMC1Q8NDZ2 RNU6-1019P-201ENST00000364424 107 ntBASIC2.11□□□□□ -2.07
SIMC1Q8NDZ2 MIR522-201ENST00000385071 87 ntBASIC2.11□□□□□ -2.07
SIMC1Q8NDZ2 SNRPGP13-201ENST00000442212 177 ntBASIC2.11□□□□□ -2.07
SIMC1Q8NDZ2 AL049830.1-201ENST00000468034 425 ntBASIC2.11□□□□□ -2.07
SIMC1Q8NDZ2 AC024995.1-201ENST00000523014 93 ntBASIC2.11□□□□□ -2.07
SIMC1Q8NDZ2 MIR4679-2-201ENST00000578358 77 ntBASIC2.11□□□□□ -2.07
SIMC1Q8NDZ2 AC087685.1-201ENST00000587507 141 ntBASIC2.11□□□□□ -2.07
SIMC1Q8NDZ2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.11□□□□□ -2.07
SIMC1Q8NDZ2 MTND5P18-201ENST00000445624 1801 ntBASIC2.11□□□□□ -2.07
SIMC1Q8NDZ2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SIMC1Q8NDZ2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SIMC1Q8NDZ2 RNU6-862P-201ENST00000362804 105 ntBASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 MIR518F-201ENST00000384973 87 ntBASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 MIR221-201ENST00000385135 110 ntBASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 RPL23AP42-201ENST00000471152 471 ntBASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 AL163195.1-201ENST00000496941 348 ntBASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 RNVU1-2-201ENST00000516326 135 ntBASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 RNU6-1149P-201ENST00000516810 97 ntBASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 SCARNA15-202ENST00000516881 127 ntBASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 Y_RNA.714-201ENST00000517065 90 ntBASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 AP002004.2-201ENST00000531656 154 ntBASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 MIR4713-201ENST00000582691 75 ntBASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 AC022217.4-201ENST00000604389 163 ntBASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 MIR376A2-201ENST00000636782 80 ntBASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SIMC1Q8NDZ2 RNA5SP99-201ENST00000364020 114 ntBASIC2.09□□□□□ -2.07
SIMC1Q8NDZ2 Y_RNA.242-201ENST00000364473 110 ntBASIC2.09□□□□□ -2.07
SIMC1Q8NDZ2 MIR520A-201ENST00000384862 85 ntBASIC2.09□□□□□ -2.07
SIMC1Q8NDZ2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SIMC1Q8NDZ2 MIR1263-201ENST00000408324 86 ntBASIC2.09□□□□□ -2.07
SIMC1Q8NDZ2 RNU2-7P-201ENST00000410794 178 ntBASIC2.09□□□□□ -2.07
SIMC1Q8NDZ2 RNU2-40P-201ENST00000410833 196 ntBASIC2.09□□□□□ -2.07
SIMC1Q8NDZ2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.09□□□□□ -2.07
SIMC1Q8NDZ2 RNU7-94P-201ENST00000459576 63 ntBASIC2.09□□□□□ -2.07
SIMC1Q8NDZ2 SNORA44.1-201ENST00000517031 108 ntBASIC2.09□□□□□ -2.07
SIMC1Q8NDZ2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.09□□□□□ -2.07
SIMC1Q8NDZ2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
SIMC1Q8NDZ2 SNORD68-201ENST00000363214 84 ntBASIC2.08□□□□□ -2.08
SIMC1Q8NDZ2 RNU6-880P-201ENST00000384526 107 ntBASIC2.08□□□□□ -2.08
SIMC1Q8NDZ2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.08□□□□□ -2.08
SIMC1Q8NDZ2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.08□□□□□ -2.08
SIMC1Q8NDZ2 RNA5SP170-201ENST00000517150 101 ntBASIC2.08□□□□□ -2.08
SIMC1Q8NDZ2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.08□□□□□ -2.08
SIMC1Q8NDZ2 SUB1P4-201ENST00000566062 339 ntBASIC2.08□□□□□ -2.08
SIMC1Q8NDZ2 AL096840.1-201ENST00000603287 93 ntBASIC2.08□□□□□ -2.08
SIMC1Q8NDZ2 AL359851.1-201ENST00000569460 4997 ntBASIC2.08□□□□□ -2.08
SIMC1Q8NDZ2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SIMC1Q8NDZ2 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
SIMC1Q8NDZ2 Y_RNA.528-201ENST00000384575 108 ntBASIC2.07□□□□□ -2.08
SIMC1Q8NDZ2 CALM2P4-201ENST00000430810 426 ntBASIC2.07□□□□□ -2.08
SIMC1Q8NDZ2 AC099677.2-201ENST00000436385 175 ntBASIC2.07□□□□□ -2.08
SIMC1Q8NDZ2 RNU6-113P-201ENST00000516653 101 ntBASIC2.07□□□□□ -2.08
SIMC1Q8NDZ2 RNA5SP481-201ENST00000516814 122 ntBASIC2.07□□□□□ -2.08
SIMC1Q8NDZ2 MIR4762-201ENST00000585261 75 ntBASIC2.07□□□□□ -2.08
SIMC1Q8NDZ2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.07□□□□□ -2.08
SIMC1Q8NDZ2 MIR6873-201ENST00000622788 63 ntBASIC2.07□□□□□ -2.08
SIMC1Q8NDZ2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SIMC1Q8NDZ2 AC092881.1-201ENST00000638218 2733 ntBASIC2.06□□□□□ -2.08
SIMC1Q8NDZ2 Y_RNA.43-201ENST00000362670 111 ntBASIC2.06□□□□□ -2.08
SIMC1Q8NDZ2 Y_RNA.366-201ENST00000365540 102 ntBASIC2.06□□□□□ -2.08
SIMC1Q8NDZ2 MIR548O-201ENST00000408583 114 ntBASIC2.06□□□□□ -2.08
SIMC1Q8NDZ2 RNA5SP89-201ENST00000410300 108 ntBASIC2.06□□□□□ -2.08
SIMC1Q8NDZ2 HMGN2P19-201ENST00000425149 265 ntBASIC2.06□□□□□ -2.08
SIMC1Q8NDZ2 AL606517.2-201ENST00000442855 241 ntBASIC2.06□□□□□ -2.08
SIMC1Q8NDZ2 RNU6-717P-201ENST00000459076 104 ntBASIC2.06□□□□□ -2.08
SIMC1Q8NDZ2 MIR5197-201ENST00000583721 112 ntBASIC2.06□□□□□ -2.08
SIMC1Q8NDZ2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.06□□□□□ -2.08
SIMC1Q8NDZ2 AC006441.5-201ENST00000612680 209 ntBASIC2.06□□□□□ -2.08
SIMC1Q8NDZ2 uc_338.20-201ENST00000621563 178 ntBASIC2.06□□□□□ -2.08
SIMC1Q8NDZ2 AC022513.1-201ENST00000624512 117 ntBASIC2.06□□□□□ -2.08
SIMC1Q8NDZ2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SIMC1Q8NDZ2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.05□□□□□ -2.08
SIMC1Q8NDZ2 U8.5-201ENST00000364528 136 ntBASIC2.05□□□□□ -2.08
SIMC1Q8NDZ2 Y_RNA.338-201ENST00000365320 114 ntBASIC2.05□□□□□ -2.08
SIMC1Q8NDZ2 RNU6-442P-201ENST00000383968 104 ntBASIC2.05□□□□□ -2.08
SIMC1Q8NDZ2 MIR802-201ENST00000390235 94 ntBASIC2.05□□□□□ -2.08
SIMC1Q8NDZ2 RNA5SP338-201ENST00000410495 85 ntBASIC2.05□□□□□ -2.08
SIMC1Q8NDZ2 RNA5SP100-201ENST00000410903 110 ntBASIC2.05□□□□□ -2.08
SIMC1Q8NDZ2 RNA5SP59-201ENST00000410922 110 ntBASIC2.05□□□□□ -2.08
SIMC1Q8NDZ2 SNRPGP14-201ENST00000435400 219 ntBASIC2.05□□□□□ -2.08
SIMC1Q8NDZ2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.05□□□□□ -2.08
SIMC1Q8NDZ2 RNU6-168P-201ENST00000516189 101 ntBASIC2.05□□□□□ -2.08
SIMC1Q8NDZ2 RNU7-25P-201ENST00000516544 62 ntBASIC2.05□□□□□ -2.08
SIMC1Q8NDZ2 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms