Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNU6-923P-201ENST00000364753 107 ntBASIC1.33□□□□□ -2.2
BEST3Q8N1M1 Y_RNA.486-201ENST00000384398 107 ntBASIC1.33□□□□□ -2.2
BEST3Q8N1M1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.33□□□□□ -2.2
BEST3Q8N1M1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.33□□□□□ -2.2
BEST3Q8N1M1 TRMT112P2-201ENST00000512910 132 ntBASIC1.33□□□□□ -2.2
BEST3Q8N1M1 MIR4744-201ENST00000581563 82 ntBASIC1.33□□□□□ -2.2
BEST3Q8N1M1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
BEST3Q8N1M1 Y_RNA.238-201ENST00000364441 102 ntBASIC1.32□□□□□ -2.2
BEST3Q8N1M1 RNU6-728P-201ENST00000365375 104 ntBASIC1.32□□□□□ -2.2
BEST3Q8N1M1 Y_RNA.432-201ENST00000384087 111 ntBASIC1.32□□□□□ -2.2
BEST3Q8N1M1 MIR320A-201ENST00000385302 82 ntBASIC1.32□□□□□ -2.2
BEST3Q8N1M1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
BEST3Q8N1M1 Y_RNA.622-201ENST00000411091 108 ntBASIC1.32□□□□□ -2.2
BEST3Q8N1M1 SNRPGP8-201ENST00000454064 226 ntBASIC1.32□□□□□ -2.2
BEST3Q8N1M1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.32□□□□□ -2.2
BEST3Q8N1M1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.32□□□□□ -2.2
BEST3Q8N1M1 RNA5SP153-201ENST00000516498 76 ntBASIC1.32□□□□□ -2.2
BEST3Q8N1M1 SNORA74.3-201ENST00000517108 154 ntBASIC1.32□□□□□ -2.2
BEST3Q8N1M1 RNU6-365P-201ENST00000517113 106 ntBASIC1.32□□□□□ -2.2
BEST3Q8N1M1 AC130289.1-201ENST00000577321 73 ntBASIC1.32□□□□□ -2.2
BEST3Q8N1M1 MIR4308-201ENST00000580634 81 ntBASIC1.32□□□□□ -2.2
BEST3Q8N1M1 AC078938.1-201ENST00000620993 318 ntBASIC1.32□□□□□ -2.2
BEST3Q8N1M1 RNU6-484P-201ENST00000384016 107 ntBASIC1.31□□□□□ -2.2
BEST3Q8N1M1 Y_RNA.571-201ENST00000384753 98 ntBASIC1.31□□□□□ -2.2
BEST3Q8N1M1 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
BEST3Q8N1M1 RNU2-70P-201ENST00000410718 179 ntBASIC1.31□□□□□ -2.2
BEST3Q8N1M1 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
BEST3Q8N1M1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.31□□□□□ -2.2
BEST3Q8N1M1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.31□□□□□ -2.2
BEST3Q8N1M1 SNORA18.7-201ENST00000516910 131 ntBASIC1.31□□□□□ -2.2
BEST3Q8N1M1 AL160236.1-201ENST00000556317 195 ntBASIC1.31□□□□□ -2.2
BEST3Q8N1M1 RNU2-4P-201ENST00000606190 192 ntBASIC1.31□□□□□ -2.2
BEST3Q8N1M1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
BEST3Q8N1M1 AL157834.3-201ENST00000615543 103 ntBASIC1.31□□□□□ -2.2
BEST3Q8N1M1 AC015726.2-201ENST00000620112 122 ntBASIC1.31□□□□□ -2.2
BEST3Q8N1M1 MIR337-201ENST00000362281 93 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 RNY1P10-201ENST00000363268 113 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 SNORD45.3-201ENST00000363836 72 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 Y_RNA.257-201ENST00000364596 102 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 SNORD24-201ENST00000383884 75 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 RNU4-70P-201ENST00000384579 139 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 RNU6-578P-201ENST00000390980 103 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 SNORA79-201ENST00000408376 140 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 MIR548O-201ENST00000408583 114 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 RNU6-847P-201ENST00000411115 108 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.3□□□□□ -2.2
BEST3Q8N1M1 RPL39P39-201ENST00000455840 151 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 SNORD123-201ENST00000459473 70 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 Y_RNA.797-201ENST00000515977 94 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 Y_RNA.666-201ENST00000516187 112 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 RNU6-504P-201ENST00000516568 104 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 RN7SKP88-201ENST00000516847 250 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 AP001485.1-201ENST00000604799 199 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 7SK.8-201ENST00000612110 250 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 7SK.11-201ENST00000615477 250 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 7SK.13-201ENST00000622040 250 ntBASIC1.3□□□□□ -2.2
BEST3Q8N1M1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
BEST3Q8N1M1 U8.1-201ENST00000362843 134 ntBASIC1.29□□□□□ -2.2
BEST3Q8N1M1 RNU6-1020P-201ENST00000363684 107 ntBASIC1.29□□□□□ -2.2
BEST3Q8N1M1 Y_RNA.634-201ENST00000364811 113 ntBASIC1.29□□□□□ -2.2
BEST3Q8N1M1 Y_RNA.435-201ENST00000384095 112 ntBASIC1.29□□□□□ -2.2
BEST3Q8N1M1 Y_RNA.547-201ENST00000384654 119 ntBASIC1.29□□□□□ -2.2
BEST3Q8N1M1 RNU6-918P-201ENST00000391219 106 ntBASIC1.29□□□□□ -2.2
BEST3Q8N1M1 U8.17-201ENST00000391292 132 ntBASIC1.29□□□□□ -2.2
BEST3Q8N1M1 RNU4-43P-201ENST00000410628 137 ntBASIC1.29□□□□□ -2.2
BEST3Q8N1M1 RNU7-25P-201ENST00000516544 62 ntBASIC1.29□□□□□ -2.2
BEST3Q8N1M1 RNU7-43P-201ENST00000516554 64 ntBASIC1.29□□□□□ -2.2
BEST3Q8N1M1 RNU6-197P-201ENST00000516680 100 ntBASIC1.29□□□□□ -2.2
BEST3Q8N1M1 AC109810.1-201ENST00000534066 224 ntBASIC1.29□□□□□ -2.2
BEST3Q8N1M1 CYP3A52P-201ENST00000563326 91 ntBASIC1.29□□□□□ -2.2
BEST3Q8N1M1 AC108706.1-201ENST00000611053 297 ntBASIC1.29□□□□□ -2.2
BEST3Q8N1M1 MIR7974-201ENST00000615835 79 ntBASIC1.29□□□□□ -2.2
BEST3Q8N1M1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
BEST3Q8N1M1 Y_RNA.182-201ENST00000363880 111 ntBASIC1.28□□□□□ -2.2
BEST3Q8N1M1 Y_RNA.274-201ENST00000364714 101 ntBASIC1.28□□□□□ -2.2
BEST3Q8N1M1 RNU6-200P-201ENST00000364743 107 ntBASIC1.28□□□□□ -2.2
BEST3Q8N1M1 Y_RNA.297-201ENST00000364950 91 ntBASIC1.28□□□□□ -2.2
BEST3Q8N1M1 MIR520C-201ENST00000385005 87 ntBASIC1.28□□□□□ -2.2
BEST3Q8N1M1 AL121914.1-201ENST00000450188 156 ntBASIC1.28□□□□□ -2.2
BEST3Q8N1M1 AL138752.1-201ENST00000452964 351 ntBASIC1.28□□□□□ -2.2
BEST3Q8N1M1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.28□□□□□ -2.2
BEST3Q8N1M1 RNU6-693P-201ENST00000516134 107 ntBASIC1.28□□□□□ -2.2
BEST3Q8N1M1 RNU6-947P-201ENST00000516264 106 ntBASIC1.28□□□□□ -2.2
BEST3Q8N1M1 SNORD111.1-201ENST00000516421 86 ntBASIC1.28□□□□□ -2.2
BEST3Q8N1M1 AC097639.2-201ENST00000603159 172 ntBASIC1.28□□□□□ -2.2
BEST3Q8N1M1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.28□□□□□ -2.2
BEST3Q8N1M1 RNU6-888P-201ENST00000363010 101 ntBASIC1.27□□□□□ -2.21
BEST3Q8N1M1 SNORA1.2-201ENST00000365189 134 ntBASIC1.27□□□□□ -2.21
BEST3Q8N1M1 SNORD61-201ENST00000384252 73 ntBASIC1.27□□□□□ -2.21
BEST3Q8N1M1 RNU6-1067P-201ENST00000384752 107 ntBASIC1.27□□□□□ -2.21
BEST3Q8N1M1 Y_RNA.644-201ENST00000459006 113 ntBASIC1.27□□□□□ -2.21
BEST3Q8N1M1 RNU4-57P-201ENST00000515980 135 ntBASIC1.27□□□□□ -2.21
BEST3Q8N1M1 RNU6-561P-201ENST00000516222 102 ntBASIC1.27□□□□□ -2.21
BEST3Q8N1M1 Y_RNA.674-201ENST00000516362 113 ntBASIC1.27□□□□□ -2.21
BEST3Q8N1M1 Y_RNA.700-201ENST00000516806 100 ntBASIC1.27□□□□□ -2.21
BEST3Q8N1M1 RNU6-165P-201ENST00000517170 99 ntBASIC1.27□□□□□ -2.21
BEST3Q8N1M1 AL353770.2-201ENST00000620024 78 ntBASIC1.27□□□□□ -2.21
BEST3Q8N1M1 MIR8065-201ENST00000620577 100 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms