Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 snoU13.26-201ENST00000459452 105 ntBASIC2.94□□□□□ -1.94
SIX5Q8N196 RNA5SP437-201ENST00000517249 129 ntBASIC2.94□□□□□ -1.94
SIX5Q8N196 SCARNA20.6-201ENST00000517251 106 ntBASIC2.94□□□□□ -1.94
SIX5Q8N196 AC068339.1-201ENST00000526965 141 ntBASIC2.94□□□□□ -1.94
SIX5Q8N196 AC021613.1-201ENST00000623880 111 ntBASIC2.94□□□□□ -1.94
SIX5Q8N196 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SIX5Q8N196 U8.6-201ENST00000364939 135 ntBASIC2.93□□□□□ -1.94
SIX5Q8N196 RNU1-51P-201ENST00000365345 176 ntBASIC2.93□□□□□ -1.94
SIX5Q8N196 Y_RNA.370-201ENST00000365589 108 ntBASIC2.93□□□□□ -1.94
SIX5Q8N196 AC093850.1-201ENST00000454121 251 ntBASIC2.93□□□□□ -1.94
SIX5Q8N196 RN7SL20P-201ENST00000488827 297 ntBASIC2.93□□□□□ -1.94
SIX5Q8N196 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.93□□□□□ -1.94
SIX5Q8N196 RNA5SP24-201ENST00000516478 95 ntBASIC2.93□□□□□ -1.94
SIX5Q8N196 SUB1P4-201ENST00000566062 339 ntBASIC2.93□□□□□ -1.94
SIX5Q8N196 MIR5009-201ENST00000578736 100 ntBASIC2.93□□□□□ -1.94
SIX5Q8N196 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.93□□□□□ -1.94
SIX5Q8N196 U1.36-201ENST00000620684 176 ntBASIC2.93□□□□□ -1.94
SIX5Q8N196 AL513423.1-201ENST00000621695 132 ntBASIC2.93□□□□□ -1.94
SIX5Q8N196 AC064859.1-201ENST00000624741 174 ntBASIC2.93□□□□□ -1.94
SIX5Q8N196 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.93□□□□□ -1.94
SIX5Q8N196 AC131280.1-202ENST00000624067 4211 ntBASIC2.93□□□□□ -1.94
SIX5Q8N196 AC007336.1-201ENST00000576365 3828 ntBASIC2.93□□□□□ -1.94
SIX5Q8N196 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SIX5Q8N196 RNU6-1104P-201ENST00000384723 104 ntBASIC2.92□□□□□ -1.94
SIX5Q8N196 MT-TI-201ENST00000387365 69 ntBASIC2.92□□□□□ -1.94
SIX5Q8N196 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.92□□□□□ -1.94
SIX5Q8N196 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.92□□□□□ -1.94
SIX5Q8N196 RNU1-143P-201ENST00000516296 146 ntBASIC2.92□□□□□ -1.94
SIX5Q8N196 SCARNA16.3-201ENST00000516595 184 ntBASIC2.92□□□□□ -1.94
SIX5Q8N196 RNU7-6P-201ENST00000516845 62 ntBASIC2.92□□□□□ -1.94
SIX5Q8N196 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.92□□□□□ -1.94
SIX5Q8N196 MIR5582-201ENST00000579697 68 ntBASIC2.92□□□□□ -1.94
SIX5Q8N196 U1.23-201ENST00000610293 146 ntBASIC2.92□□□□□ -1.94
SIX5Q8N196 AC021506.2-201ENST00000612354 169 ntBASIC2.92□□□□□ -1.94
SIX5Q8N196 RNU1-68P-201ENST00000615382 146 ntBASIC2.92□□□□□ -1.94
SIX5Q8N196 MIR6817-201ENST00000615588 66 ntBASIC2.92□□□□□ -1.94
SIX5Q8N196 U1.39-201ENST00000621562 146 ntBASIC2.92□□□□□ -1.94
SIX5Q8N196 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX5Q8N196 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SIX5Q8N196 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SIX5Q8N196 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SIX5Q8N196 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SIX5Q8N196 VTRNA1-1-201ENST00000363120 99 ntBASIC2.91□□□□□ -1.94
SIX5Q8N196 U8.2-201ENST00000363156 134 ntBASIC2.91□□□□□ -1.94
SIX5Q8N196 Y_RNA.494-201ENST00000384432 111 ntBASIC2.91□□□□□ -1.94
SIX5Q8N196 Y_RNA.544-201ENST00000384650 113 ntBASIC2.91□□□□□ -1.94
SIX5Q8N196 RNA5SP144-201ENST00000410846 116 ntBASIC2.91□□□□□ -1.94
SIX5Q8N196 RNU6-893P-201ENST00000458841 100 ntBASIC2.91□□□□□ -1.94
SIX5Q8N196 RNU7-67P-201ENST00000459003 62 ntBASIC2.91□□□□□ -1.94
SIX5Q8N196 RNA5SP217-201ENST00000515959 91 ntBASIC2.91□□□□□ -1.94
SIX5Q8N196 RNU7-53P-201ENST00000516705 60 ntBASIC2.91□□□□□ -1.94
SIX5Q8N196 SNORD53-201ENST00000579969 78 ntBASIC2.91□□□□□ -1.94
SIX5Q8N196 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.91□□□□□ -1.94
SIX5Q8N196 SNORD3E-202ENST00000627253 216 ntBASIC2.91□□□□□ -1.94
SIX5Q8N196 MIR4679-1-201ENST00000637619 75 ntBASIC2.91□□□□□ -1.94
SIX5Q8N196 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SIX5Q8N196 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SIX5Q8N196 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SIX5Q8N196 RNU6-112P-201ENST00000363599 104 ntBASIC2.9□□□□□ -1.95
SIX5Q8N196 RNA5SP68-201ENST00000363885 119 ntBASIC2.9□□□□□ -1.95
SIX5Q8N196 Y_RNA.344-201ENST00000365381 112 ntBASIC2.9□□□□□ -1.95
SIX5Q8N196 MIR9-1-201ENST00000385198 89 ntBASIC2.9□□□□□ -1.95
SIX5Q8N196 MIR660-201ENST00000385235 97 ntBASIC2.9□□□□□ -1.95
SIX5Q8N196 AL138827.1-201ENST00000402666 306 ntBASIC2.9□□□□□ -1.95
SIX5Q8N196 RPL32P35-201ENST00000415214 394 ntBASIC2.9□□□□□ -1.95
SIX5Q8N196 RPL39P25-201ENST00000449384 154 ntBASIC2.9□□□□□ -1.95
SIX5Q8N196 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
SIX5Q8N196 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
SIX5Q8N196 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SIX5Q8N196 RNU1-112P-201ENST00000364401 164 ntBASIC2.89□□□□□ -1.95
SIX5Q8N196 PGBD4P5-201ENST00000445958 426 ntBASIC2.89□□□□□ -1.95
SIX5Q8N196 SNORA40.13-201ENST00000516379 120 ntBASIC2.89□□□□□ -1.95
SIX5Q8N196 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.89□□□□□ -1.95
SIX5Q8N196 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SIX5Q8N196 HMGN2P35-201ENST00000412164 270 ntBASIC2.88□□□□□ -1.95
SIX5Q8N196 SNORA72.7-201ENST00000516349 94 ntBASIC2.88□□□□□ -1.95
SIX5Q8N196 RNA5SP148-201ENST00000516527 94 ntBASIC2.88□□□□□ -1.95
SIX5Q8N196 RNU6-958P-201ENST00000516995 106 ntBASIC2.88□□□□□ -1.95
SIX5Q8N196 AC141557.1-201ENST00000540982 400 ntBASIC2.88□□□□□ -1.95
SIX5Q8N196 MIR3152-201ENST00000579801 74 ntBASIC2.88□□□□□ -1.95
SIX5Q8N196 SNORD14A-201ENST00000606526 91 ntBASIC2.88□□□□□ -1.95
SIX5Q8N196 AP001318.4-201ENST00000616637 121 ntBASIC2.88□□□□□ -1.95
SIX5Q8N196 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.88□□□□□ -1.95
SIX5Q8N196 AL162726.3-218ENST00000636401 95 ntBASIC2.88□□□□□ -1.95
SIX5Q8N196 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.88□□□□□ -1.95
SIX5Q8N196 AL442644.1-201ENST00000454390 3105 ntBASIC2.88□□□□□ -1.95
SIX5Q8N196 Y_RNA.369-201ENST00000365568 117 ntBASIC2.87□□□□□ -1.95
SIX5Q8N196 RNU6-296P-201ENST00000384608 107 ntBASIC2.87□□□□□ -1.95
SIX5Q8N196 RNU6-1067P-201ENST00000384752 107 ntBASIC2.87□□□□□ -1.95
SIX5Q8N196 MIR1912-201ENST00000410389 80 ntBASIC2.87□□□□□ -1.95
SIX5Q8N196 RNA5SP261-201ENST00000410536 106 ntBASIC2.87□□□□□ -1.95
SIX5Q8N196 RN7SKP192-201ENST00000411291 327 ntBASIC2.87□□□□□ -1.95
SIX5Q8N196 RPS29P29-201ENST00000456396 171 ntBASIC2.87□□□□□ -1.95
SIX5Q8N196 RNU6-970P-201ENST00000516312 107 ntBASIC2.87□□□□□ -1.95
SIX5Q8N196 AC004812.1-201ENST00000540773 146 ntBASIC2.87□□□□□ -1.95
SIX5Q8N196 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SIX5Q8N196 AC092881.1-201ENST00000638218 2733 ntBASIC2.87□□□□□ -1.95
SIX5Q8N196 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.87□□□□□ -1.95
SIX5Q8N196 Y_RNA.348-201ENST00000365403 103 ntBASIC2.86□□□□□ -1.95
SIX5Q8N196 RNU1-52P-201ENST00000384190 164 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms