Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF135Q8IUD6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RNF135Q8IUD6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNF135Q8IUD6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RNF135Q8IUD6 SNORD115-35-201ENST00000365122 82 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 MIR887-201ENST00000401258 79 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 RPL32P35-201ENST00000415214 394 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 RNA5SP217-201ENST00000515959 91 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 RNU1-41P-201ENST00000516161 162 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 RNU1-143P-201ENST00000516296 146 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 RNU1-48P-201ENST00000516400 162 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.21□□□□□ -1.9
RNF135Q8IUD6 MIR5094-201ENST00000578766 85 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 MIR4524B-201ENST00000581569 115 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 AC078899.2-201ENST00000595282 212 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 U1.23-201ENST00000610293 146 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 RNU1-68P-201ENST00000615382 146 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 U1.39-201ENST00000621562 146 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 AC064859.1-201ENST00000624741 174 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 AC095038.3-201ENST00000634439 195 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 AC091304.10-201ENST00000641554 121 ntBASIC3.21□□□□□ -1.9
RNF135Q8IUD6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF135Q8IUD6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RNF135Q8IUD6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF135Q8IUD6 RNU6-219P-201ENST00000364728 107 ntBASIC3.2□□□□□ -1.9
RNF135Q8IUD6 RNU6-24P-201ENST00000384440 107 ntBASIC3.2□□□□□ -1.9
RNF135Q8IUD6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RNF135Q8IUD6 SNORD67-201ENST00000390833 111 ntBASIC3.2□□□□□ -1.9
RNF135Q8IUD6 RN7SKP200-201ENST00000410564 320 ntBASIC3.2□□□□□ -1.9
RNF135Q8IUD6 RNA5SP144-201ENST00000410846 116 ntBASIC3.2□□□□□ -1.9
RNF135Q8IUD6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.2□□□□□ -1.9
RNF135Q8IUD6 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.2□□□□□ -1.9
RNF135Q8IUD6 AC019288.1-201ENST00000557918 224 ntBASIC3.2□□□□□ -1.9
RNF135Q8IUD6 AC073476.4-201ENST00000628409 72 ntBASIC3.2□□□□□ -1.9
RNF135Q8IUD6 AC009487.2-201ENST00000420969 6821 ntBASIC3.2□□□□□ -1.9
RNF135Q8IUD6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
RNF135Q8IUD6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RNF135Q8IUD6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNF135Q8IUD6 MIR22-201ENST00000362190 85 ntBASIC3.19□□□□□ -1.9
RNF135Q8IUD6 MIR342-201ENST00000362212 99 ntBASIC3.19□□□□□ -1.9
RNF135Q8IUD6 Y_RNA.96-201ENST00000363092 109 ntBASIC3.19□□□□□ -1.9
RNF135Q8IUD6 SNORA25.6-201ENST00000364121 118 ntBASIC3.19□□□□□ -1.9
RNF135Q8IUD6 SNORA70B-201ENST00000384210 135 ntBASIC3.19□□□□□ -1.9
RNF135Q8IUD6 SNORA27-201ENST00000384323 126 ntBASIC3.19□□□□□ -1.9
RNF135Q8IUD6 SNORA18-201ENST00000384416 132 ntBASIC3.19□□□□□ -1.9
RNF135Q8IUD6 RNU1-148P-201ENST00000384472 162 ntBASIC3.19□□□□□ -1.9
RNF135Q8IUD6 SNX2P2-201ENST00000424553 323 ntBASIC3.19□□□□□ -1.9
RNF135Q8IUD6 AL512326.2-201ENST00000426359 151 ntBASIC3.19□□□□□ -1.9
RNF135Q8IUD6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.19□□□□□ -1.9
RNF135Q8IUD6 AL353813.1-201ENST00000440700 253 ntBASIC3.19□□□□□ -1.9
RNF135Q8IUD6 RNU2-11P-201ENST00000459191 187 ntBASIC3.19□□□□□ -1.9
RNF135Q8IUD6 AC004812.1-201ENST00000540773 146 ntBASIC3.19□□□□□ -1.9
RNF135Q8IUD6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RNF135Q8IUD6 Y_RNA.241-201ENST00000364470 117 ntBASIC3.18□□□□□ -1.9
RNF135Q8IUD6 SNORD45B-201ENST00000364617 72 ntBASIC3.18□□□□□ -1.9
RNF135Q8IUD6 RNU6-424P-201ENST00000384367 105 ntBASIC3.18□□□□□ -1.9
RNF135Q8IUD6 MIR597-201ENST00000384968 97 ntBASIC3.18□□□□□ -1.9
RNF135Q8IUD6 RNU11-3P-201ENST00000391111 133 ntBASIC3.18□□□□□ -1.9
RNF135Q8IUD6 AL034345.1-201ENST00000407768 123 ntBASIC3.18□□□□□ -1.9
RNF135Q8IUD6 AC073261.1-201ENST00000429409 121 ntBASIC3.18□□□□□ -1.9
RNF135Q8IUD6 HSPE1P9-201ENST00000440046 311 ntBASIC3.18□□□□□ -1.9
RNF135Q8IUD6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF135Q8IUD6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF135Q8IUD6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF135Q8IUD6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.18□□□□□ -1.9
RNF135Q8IUD6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RNF135Q8IUD6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RNF135Q8IUD6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RNF135Q8IUD6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RNF135Q8IUD6 MIR148B-201ENST00000362252 99 ntBASIC3.17□□□□□ -1.9
RNF135Q8IUD6 RNU6-950P-201ENST00000384651 107 ntBASIC3.17□□□□□ -1.9
RNF135Q8IUD6 MIR504-201ENST00000385065 83 ntBASIC3.17□□□□□ -1.9
RNF135Q8IUD6 RN7SKP123-201ENST00000410732 291 ntBASIC3.17□□□□□ -1.9
RNF135Q8IUD6 AL022718.1-201ENST00000412004 84 ntBASIC3.17□□□□□ -1.9
RNF135Q8IUD6 AL035398.1-201ENST00000430869 322 ntBASIC3.17□□□□□ -1.9
RNF135Q8IUD6 AC015922.2-201ENST00000435593 184 ntBASIC3.17□□□□□ -1.9
RNF135Q8IUD6 Y_RNA.705-201ENST00000516862 110 ntBASIC3.17□□□□□ -1.9
RNF135Q8IUD6 MIR4658-201ENST00000584344 65 ntBASIC3.17□□□□□ -1.9
RNF135Q8IUD6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.17□□□□□ -1.9
RNF135Q8IUD6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
RNF135Q8IUD6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
RNF135Q8IUD6 AL442644.1-201ENST00000454390 3105 ntBASIC3.17□□□□□ -1.9
RNF135Q8IUD6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF135Q8IUD6 Y_RNA.95-201ENST00000363079 95 ntBASIC3.16□□□□□ -1.9
RNF135Q8IUD6 RNU6-679P-201ENST00000391003 106 ntBASIC3.16□□□□□ -1.9
RNF135Q8IUD6 RNU6-887P-201ENST00000410660 100 ntBASIC3.16□□□□□ -1.9
RNF135Q8IUD6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF135Q8IUD6 RNA5SP137-201ENST00000516833 135 ntBASIC3.16□□□□□ -1.9
RNF135Q8IUD6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.16□□□□□ -1.9
RNF135Q8IUD6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RNF135Q8IUD6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RNF135Q8IUD6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RNF135Q8IUD6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.15□□□□□ -1.9
RNF135Q8IUD6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.15□□□□□ -1.91
RNF135Q8IUD6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORD115-34-201ENST00000362441 82 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORD115-12-201ENST00000362583 82 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORD115-29-201ENST00000362834 82 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms