Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 MIR376A2-201ENST00000636782 80 ntBASIC1.83□□□□□ -2.12
USP43Q70EL4 Y_RNA.366-201ENST00000365540 102 ntBASIC1.82□□□□□ -2.12
USP43Q70EL4 RNU6-438P-201ENST00000365561 103 ntBASIC1.82□□□□□ -2.12
USP43Q70EL4 RNU6-1292P-201ENST00000383856 107 ntBASIC1.82□□□□□ -2.12
USP43Q70EL4 MIR590-201ENST00000385008 97 ntBASIC1.82□□□□□ -2.12
USP43Q70EL4 SNORA19.1-201ENST00000410656 129 ntBASIC1.82□□□□□ -2.12
USP43Q70EL4 RNA5SP136-201ENST00000410906 107 ntBASIC1.82□□□□□ -2.12
USP43Q70EL4 AC123900.1-201ENST00000420390 96 ntBASIC1.82□□□□□ -2.12
USP43Q70EL4 AC055731.1-201ENST00000474387 401 ntBASIC1.82□□□□□ -2.12
USP43Q70EL4 RPL39P34-201ENST00000477141 156 ntBASIC1.82□□□□□ -2.12
USP43Q70EL4 AC097462.1-201ENST00000514125 324 ntBASIC1.82□□□□□ -2.12
USP43Q70EL4 SNORA18.4-201ENST00000516440 124 ntBASIC1.82□□□□□ -2.12
USP43Q70EL4 RNU6-856P-201ENST00000516959 98 ntBASIC1.82□□□□□ -2.12
USP43Q70EL4 MIR4529-201ENST00000578110 78 ntBASIC1.82□□□□□ -2.12
USP43Q70EL4 AL355297.2-201ENST00000604792 129 ntBASIC1.82□□□□□ -2.12
USP43Q70EL4 U2.20-201ENST00000613956 192 ntBASIC1.82□□□□□ -2.12
USP43Q70EL4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
USP43Q70EL4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
USP43Q70EL4 RNY1P10-201ENST00000363268 113 ntBASIC1.81□□□□□ -2.12
USP43Q70EL4 SNORD61-201ENST00000384252 73 ntBASIC1.81□□□□□ -2.12
USP43Q70EL4 RNU1-148P-201ENST00000384472 162 ntBASIC1.81□□□□□ -2.12
USP43Q70EL4 MIR548A2-201ENST00000384956 97 ntBASIC1.81□□□□□ -2.12
USP43Q70EL4 MIR1302-5-201ENST00000408164 150 ntBASIC1.81□□□□□ -2.12
USP43Q70EL4 RPL31P63-201ENST00000422565 375 ntBASIC1.81□□□□□ -2.12
USP43Q70EL4 HMGN2P19-201ENST00000425149 265 ntBASIC1.81□□□□□ -2.12
USP43Q70EL4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
USP43Q70EL4 CYP2C59P-201ENST00000457790 269 ntBASIC1.81□□□□□ -2.12
USP43Q70EL4 RPS27P22-201ENST00000478056 241 ntBASIC1.81□□□□□ -2.12
USP43Q70EL4 COX6CP6-201ENST00000490840 228 ntBASIC1.81□□□□□ -2.12
USP43Q70EL4 AC018868.1-201ENST00000491307 315 ntBASIC1.81□□□□□ -2.12
USP43Q70EL4 CKS1BP2-201ENST00000497342 240 ntBASIC1.81□□□□□ -2.12
USP43Q70EL4 RN7SKP12-201ENST00000516275 143 ntBASIC1.81□□□□□ -2.12
USP43Q70EL4 RNU6-158P-201ENST00000517104 100 ntBASIC1.81□□□□□ -2.12
USP43Q70EL4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.81□□□□□ -2.12
USP43Q70EL4 MIR3129-201ENST00000581095 76 ntBASIC1.81□□□□□ -2.12
USP43Q70EL4 AL627230.6-201ENST00000611129 280 ntBASIC1.81□□□□□ -2.12
USP43Q70EL4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.81□□□□□ -2.12
USP43Q70EL4 Y_RNA.466-201ENST00000384294 113 ntBASIC1.8□□□□□ -2.12
USP43Q70EL4 SNORD77.3-201ENST00000391113 65 ntBASIC1.8□□□□□ -2.12
USP43Q70EL4 SNORA26.9-201ENST00000391322 122 ntBASIC1.8□□□□□ -2.12
USP43Q70EL4 SNORA11.4-201ENST00000408823 129 ntBASIC1.8□□□□□ -2.12
USP43Q70EL4 MTATP8P2-201ENST00000435212 202 ntBASIC1.8□□□□□ -2.12
USP43Q70EL4 OR9P1P-201ENST00000496431 281 ntBASIC1.8□□□□□ -2.12
USP43Q70EL4 MRPS17P9-201ENST00000511924 393 ntBASIC1.8□□□□□ -2.12
USP43Q70EL4 RNU6-113P-201ENST00000516653 101 ntBASIC1.8□□□□□ -2.12
USP43Q70EL4 SNORA31.25-201ENST00000517242 134 ntBASIC1.8□□□□□ -2.12
USP43Q70EL4 RNU2-19P-201ENST00000517288 84 ntBASIC1.8□□□□□ -2.12
USP43Q70EL4 U6.73-201ENST00000619194 103 ntBASIC1.8□□□□□ -2.12
USP43Q70EL4 AC025521.1-201ENST00000621624 286 ntBASIC1.8□□□□□ -2.12
USP43Q70EL4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
USP43Q70EL4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
USP43Q70EL4 SNORA63.5-201ENST00000363548 123 ntBASIC1.79□□□□□ -2.12
USP43Q70EL4 RNU1-96P-201ENST00000364163 162 ntBASIC1.79□□□□□ -2.12
USP43Q70EL4 Y_RNA.362-201ENST00000365518 110 ntBASIC1.79□□□□□ -2.12
USP43Q70EL4 RNU6-820P-201ENST00000384273 107 ntBASIC1.79□□□□□ -2.12
USP43Q70EL4 Y_RNA.544-201ENST00000384650 113 ntBASIC1.79□□□□□ -2.12
USP43Q70EL4 AL117342.1-201ENST00000404861 406 ntBASIC1.79□□□□□ -2.12
USP43Q70EL4 AC060773.1-201ENST00000421698 310 ntBASIC1.79□□□□□ -2.12
USP43Q70EL4 MTATP6P21-201ENST00000440681 189 ntBASIC1.79□□□□□ -2.12
USP43Q70EL4 RNU6-904P-201ENST00000516206 101 ntBASIC1.79□□□□□ -2.12
USP43Q70EL4 RNU6-830P-201ENST00000516353 107 ntBASIC1.79□□□□□ -2.12
USP43Q70EL4 RNU6-1149P-201ENST00000516810 97 ntBASIC1.79□□□□□ -2.12
USP43Q70EL4 MIR5009-201ENST00000578736 100 ntBASIC1.79□□□□□ -2.12
USP43Q70EL4 MIR2681-201ENST00000581814 105 ntBASIC1.79□□□□□ -2.12
USP43Q70EL4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.79□□□□□ -2.12
USP43Q70EL4 MIR4438-201ENST00000585271 93 ntBASIC1.79□□□□□ -2.12
USP43Q70EL4 AL137067.1-201ENST00000615933 120 ntBASIC1.79□□□□□ -2.12
USP43Q70EL4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.79□□□□□ -2.12
USP43Q70EL4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.79□□□□□ -2.12
USP43Q70EL4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
USP43Q70EL4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
USP43Q70EL4 Y_RNA.78-201ENST00000362970 110 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 RNU6-888P-201ENST00000363010 101 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 Y_RNA.198-201ENST00000364013 98 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 RNU4-13P-201ENST00000364019 141 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 RNU6-743P-201ENST00000364151 106 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 SNORA64-201ENST00000384674 134 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 SNORD78.1-201ENST00000390866 65 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 HMGN2P23-201ENST00000456759 269 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 RPS26P48-201ENST00000491713 339 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 RNU6-504P-201ENST00000516568 104 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 RNU7-172P-201ENST00000517125 64 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 RNU7-128P-201ENST00000517247 62 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 AC011604.1-201ENST00000545978 196 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 MIR3126-201ENST00000577443 74 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 MIR4662B-201ENST00000579498 81 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 MALAT1.1-201ENST00000618249 95 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 AC134878.1-201ENST00000619901 243 ntBASIC1.78□□□□□ -2.12
USP43Q70EL4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
USP43Q70EL4 Y_RNA.342-201ENST00000365352 113 ntBASIC1.77□□□□□ -2.13
USP43Q70EL4 Y_RNA.344-201ENST00000365381 112 ntBASIC1.77□□□□□ -2.13
USP43Q70EL4 SNORA25B-201ENST00000365507 128 ntBASIC1.77□□□□□ -2.13
USP43Q70EL4 SNORD24-201ENST00000383884 75 ntBASIC1.77□□□□□ -2.13
USP43Q70EL4 RNU6-1113P-201ENST00000384348 107 ntBASIC1.77□□□□□ -2.13
USP43Q70EL4 SNORA26-201ENST00000391286 122 ntBASIC1.77□□□□□ -2.13
USP43Q70EL4 EDDM3CP-201ENST00000415977 425 ntBASIC1.77□□□□□ -2.13
USP43Q70EL4 HMGN2P34-201ENST00000437647 269 ntBASIC1.77□□□□□ -2.13
USP43Q70EL4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.77□□□□□ -2.13
USP43Q70EL4 AC068339.1-201ENST00000526965 141 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms