Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC090617.8-201ENST00000623339 167 ntBASIC-2.19□□□□□ -2.76
VPS13CQ709C8 Y_RNA.665-201ENST00000516177 98 ntBASIC-2.19□□□□□ -2.76
VPS13CQ709C8 RNU6-1260P-201ENST00000362944 107 ntBASIC-2.19□□□□□ -2.76
VPS13CQ709C8 MIR208B-201ENST00000401172 77 ntBASIC-2.19□□□□□ -2.76
VPS13CQ709C8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-2.2□□□□□ -2.76
VPS13CQ709C8 snoU2-30.1-201ENST00000365012 70 ntBASIC-2.2□□□□□ -2.76
VPS13CQ709C8 RNU4-80P-201ENST00000363200 141 ntBASIC-2.2□□□□□ -2.76
VPS13CQ709C8 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-2.2□□□□□ -2.76
VPS13CQ709C8 RMST_10.1-201ENST00000616309 154 ntBASIC-2.2□□□□□ -2.76
VPS13CQ709C8 RNU6-190P-201ENST00000384154 102 ntBASIC-2.2□□□□□ -2.76
VPS13CQ709C8 RNA5SP237-201ENST00000410414 113 ntBASIC-2.2□□□□□ -2.76
VPS13CQ709C8 SNRPGP7-201ENST00000469016 106 ntBASIC-2.2□□□□□ -2.76
VPS13CQ709C8 AC091133.4-201ENST00000511142 308 ntBASIC-2.2□□□□□ -2.76
VPS13CQ709C8 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-2.2□□□□□ -2.76
VPS13CQ709C8 U6.42-201ENST00000618440 107 ntBASIC-2.2□□□□□ -2.76
VPS13CQ709C8 RNU6-1284P-201ENST00000363701 100 ntBASIC-2.21□□□□□ -2.76
VPS13CQ709C8 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-2.21□□□□□ -2.76
VPS13CQ709C8 RPL23AP30-201ENST00000432419 501 ntBASIC-2.21□□□□□ -2.76
VPS13CQ709C8 AL157770.1-201ENST00000623049 439 ntBASIC-2.21□□□□□ -2.76
VPS13CQ709C8 RNU6-1339P-201ENST00000363574 91 ntBASIC-2.21□□□□□ -2.76
VPS13CQ709C8 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-2.21□□□□□ -2.76
VPS13CQ709C8 MTCO3P39-201ENST00000514812 518 ntBASIC-2.21□□□□□ -2.76
VPS13CQ709C8 AC231657.1-201ENST00000624313 397 ntBASIC-2.21□□□□□ -2.76
VPS13CQ709C8 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.22□□□□□ -2.76
VPS13CQ709C8 Y_RNA.31-201ENST00000362574 102 ntBASIC-2.22□□□□□ -2.76
VPS13CQ709C8 Y_RNA.199-201ENST00000364014 102 ntBASIC-2.22□□□□□ -2.76
VPS13CQ709C8 MIR599-201ENST00000385069 95 ntBASIC-2.22□□□□□ -2.76
VPS13CQ709C8 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-2.22□□□□□ -2.76
VPS13CQ709C8 RNU6-966P-201ENST00000516479 104 ntBASIC-2.22□□□□□ -2.76
VPS13CQ709C8 RNU6-685P-201ENST00000517088 95 ntBASIC-2.22□□□□□ -2.76
VPS13CQ709C8 MIR4464-201ENST00000580818 92 ntBASIC-2.22□□□□□ -2.76
VPS13CQ709C8 U3.4-201ENST00000363352 213 ntBASIC-2.22□□□□□ -2.76
VPS13CQ709C8 RNU6-949P-201ENST00000384040 107 ntBASIC-2.22□□□□□ -2.76
VPS13CQ709C8 MIR522-201ENST00000385071 87 ntBASIC-2.22□□□□□ -2.76
VPS13CQ709C8 RNA5SP403-201ENST00000363598 108 ntBASIC-2.22□□□□□ -2.77
VPS13CQ709C8 RNU6-442P-201ENST00000383968 104 ntBASIC-2.22□□□□□ -2.77
VPS13CQ709C8 RNU2-13P-201ENST00000515909 113 ntBASIC-2.22□□□□□ -2.77
VPS13CQ709C8 AC091946.2-201ENST00000606105 291 ntBASIC-2.22□□□□□ -2.77
VPS13CQ709C8 AC079248.2-201ENST00000623779 326 ntBASIC-2.22□□□□□ -2.77
VPS13CQ709C8 AL078596.1-201ENST00000624856 447 ntBASIC-2.22□□□□□ -2.77
VPS13CQ709C8 MTND5P42-201ENST00000637720 498 ntBASIC-2.22□□□□□ -2.77
VPS13CQ709C8 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-2.23□□□□□ -2.77
VPS13CQ709C8 USP9YP30-201ENST00000430729 455 ntBASIC-2.23□□□□□ -2.77
VPS13CQ709C8 RNU6-429P-201ENST00000384582 108 ntBASIC-2.23□□□□□ -2.77
VPS13CQ709C8 AC104850.1-201ENST00000435940 476 ntBASIC-2.23□□□□□ -2.77
VPS13CQ709C8 AC002542.1-201ENST00000440683 193 ntBASIC-2.23□□□□□ -2.77
VPS13CQ709C8 SNORD11B-201ENST00000607707 90 ntBASIC-2.23□□□□□ -2.77
VPS13CQ709C8 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-2.23□□□□□ -2.77
VPS13CQ709C8 RNU6-619P-201ENST00000365146 108 ntBASIC-2.23□□□□□ -2.77
VPS13CQ709C8 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-2.23□□□□□ -2.77
VPS13CQ709C8 RNU6-131P-201ENST00000391144 107 ntBASIC-2.23□□□□□ -2.77
VPS13CQ709C8 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-2.23□□□□□ -2.77
VPS13CQ709C8 AC090616.2-202ENST00000584248 222 ntBASIC-2.23□□□□□ -2.77
VPS13CQ709C8 RNU2-28P-201ENST00000410457 189 ntBASIC-2.24□□□□□ -2.77
VPS13CQ709C8 AC096949.1-201ENST00000412047 152 ntBASIC-2.24□□□□□ -2.77
VPS13CQ709C8 MRPS10P1-201ENST00000448483 130 ntBASIC-2.24□□□□□ -2.77
VPS13CQ709C8 RNU7-181P-201ENST00000517234 74 ntBASIC-2.24□□□□□ -2.77
VPS13CQ709C8 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.24□□□□□ -2.77
VPS13CQ709C8 snoU13.10-201ENST00000459301 103 ntBASIC-2.24□□□□□ -2.77
VPS13CQ709C8 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-2.24□□□□□ -2.77
VPS13CQ709C8 EEF1E1P1-201ENST00000446998 430 ntBASIC-2.24□□□□□ -2.77
VPS13CQ709C8 Y_RNA.701-201ENST00000516812 110 ntBASIC-2.24□□□□□ -2.77
VPS13CQ709C8 AC120024.2-201ENST00000576526 175 ntBASIC-2.24□□□□□ -2.77
VPS13CQ709C8 MIR15A-201ENST00000607334 83 ntBASIC-2.24□□□□□ -2.77
VPS13CQ709C8 RNU6-227P-201ENST00000362865 103 ntBASIC-2.25□□□□□ -2.77
VPS13CQ709C8 Y_RNA.517-201ENST00000384551 106 ntBASIC-2.25□□□□□ -2.77
VPS13CQ709C8 AC012306.1-201ENST00000423267 114 ntBASIC-2.25□□□□□ -2.77
VPS13CQ709C8 RNU6-377P-201ENST00000515965 102 ntBASIC-2.25□□□□□ -2.77
VPS13CQ709C8 U4.1-201ENST00000620349 87 ntBASIC-2.25□□□□□ -2.77
VPS13CQ709C8 SNORD115-21-201ENST00000362963 81 ntBASIC-2.25□□□□□ -2.77
VPS13CQ709C8 Y_RNA.509-201ENST00000384506 99 ntBASIC-2.25□□□□□ -2.77
VPS13CQ709C8 AC004866.1-201ENST00000411748 78 ntBASIC-2.25□□□□□ -2.77
VPS13CQ709C8 MTND4P18-201ENST00000447010 465 ntBASIC-2.25□□□□□ -2.77
VPS13CQ709C8 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-2.25□□□□□ -2.77
VPS13CQ709C8 RNU6-80P-201ENST00000384195 107 ntBASIC-2.25□□□□□ -2.77
VPS13CQ709C8 RNU6-21P-201ENST00000384710 107 ntBASIC-2.25□□□□□ -2.77
VPS13CQ709C8 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-2.25□□□□□ -2.77
VPS13CQ709C8 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.26□□□□□ -2.77
VPS13CQ709C8 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.26□□□□□ -2.77
VPS13CQ709C8 SNORD51.1-201ENST00000365405 77 ntBASIC-2.26□□□□□ -2.77
VPS13CQ709C8 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.26□□□□□ -2.77
VPS13CQ709C8 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-2.26□□□□□ -2.77
VPS13CQ709C8 MIR548W-201ENST00000581970 74 ntBASIC-2.26□□□□□ -2.77
VPS13CQ709C8 MIR6773-201ENST00000612812 74 ntBASIC-2.26□□□□□ -2.77
VPS13CQ709C8 AC137590.2-201ENST00000619709 240 ntBASIC-2.26□□□□□ -2.77
VPS13CQ709C8 SNORD115-6-201ENST00000363942 82 ntBASIC-2.26□□□□□ -2.77
VPS13CQ709C8 SNORD14E-201ENST00000364009 85 ntBASIC-2.26□□□□□ -2.77
VPS13CQ709C8 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-2.26□□□□□ -2.77
VPS13CQ709C8 RNU2-14P-201ENST00000411053 191 ntBASIC-2.26□□□□□ -2.77
VPS13CQ709C8 BX119904.4-201ENST00000424402 301 ntBASIC-2.26□□□□□ -2.77
VPS13CQ709C8 AC097635.1-201ENST00000450678 155 ntBASIC-2.26□□□□□ -2.77
VPS13CQ709C8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.26□□□□□ -2.77
VPS13CQ709C8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-2.26□□□□□ -2.77
VPS13CQ709C8 MIR519E-201ENST00000385075 84 ntBASIC-2.27□□□□□ -2.77
VPS13CQ709C8 RNY4P25-201ENST00000459254 96 ntBASIC-2.27□□□□□ -2.77
VPS13CQ709C8 Y_RNA.360-201ENST00000365512 102 ntBASIC-2.27□□□□□ -2.77
VPS13CQ709C8 RNU6-1201P-201ENST00000384227 107 ntBASIC-2.27□□□□□ -2.77
VPS13CQ709C8 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.27□□□□□ -2.77
VPS13CQ709C8 MTND4P3-201ENST00000417829 541 ntBASIC-2.27□□□□□ -2.77
VPS13CQ709C8 RPL39P6-201ENST00000448289 150 ntBASIC-2.27□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms