Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 Y_RNA.37-201ENST00000362606 108 ntBASIC1.7□□□□□ -2.14
PTCHD4Q6ZW05 RNA5SP259-201ENST00000365541 109 ntBASIC1.7□□□□□ -2.14
PTCHD4Q6ZW05 SNORA20-201ENST00000384662 132 ntBASIC1.7□□□□□ -2.14
PTCHD4Q6ZW05 MIR513A1-201ENST00000385138 129 ntBASIC1.7□□□□□ -2.14
PTCHD4Q6ZW05 MIR136-201ENST00000385207 82 ntBASIC1.7□□□□□ -2.14
PTCHD4Q6ZW05 MIR624-201ENST00000385217 97 ntBASIC1.7□□□□□ -2.14
PTCHD4Q6ZW05 MIR613-201ENST00000385248 95 ntBASIC1.7□□□□□ -2.14
PTCHD4Q6ZW05 AC019129.1-201ENST00000403786 261 ntBASIC1.7□□□□□ -2.14
PTCHD4Q6ZW05 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.7□□□□□ -2.14
PTCHD4Q6ZW05 AL392103.1-201ENST00000447000 198 ntBASIC1.7□□□□□ -2.14
PTCHD4Q6ZW05 RNU4-57P-201ENST00000515980 135 ntBASIC1.7□□□□□ -2.14
PTCHD4Q6ZW05 SNORA77B-201ENST00000578179 125 ntBASIC1.7□□□□□ -2.14
PTCHD4Q6ZW05 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.7□□□□□ -2.14
PTCHD4Q6ZW05 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
PTCHD4Q6ZW05 Y_RNA.251-201ENST00000364551 99 ntBASIC1.69□□□□□ -2.14
PTCHD4Q6ZW05 RNU6-1292P-201ENST00000383856 107 ntBASIC1.69□□□□□ -2.14
PTCHD4Q6ZW05 Y_RNA.497-201ENST00000384447 98 ntBASIC1.69□□□□□ -2.14
PTCHD4Q6ZW05 Y_RNA.568-201ENST00000384742 113 ntBASIC1.69□□□□□ -2.14
PTCHD4Q6ZW05 RNU6-460P-201ENST00000391158 108 ntBASIC1.69□□□□□ -2.14
PTCHD4Q6ZW05 HMGN2P23-201ENST00000456759 269 ntBASIC1.69□□□□□ -2.14
PTCHD4Q6ZW05 UBE2DNL-203ENST00000474922 222 ntBASIC1.69□□□□□ -2.14
PTCHD4Q6ZW05 RNU6-830P-201ENST00000516353 107 ntBASIC1.69□□□□□ -2.14
PTCHD4Q6ZW05 MIR4419B-201ENST00000577260 68 ntBASIC1.69□□□□□ -2.14
PTCHD4Q6ZW05 FAM106DP-201ENST00000586416 501 ntBASIC1.69□□□□□ -2.14
PTCHD4Q6ZW05 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.69□□□□□ -2.14
PTCHD4Q6ZW05 MIR376A2-201ENST00000636782 80 ntBASIC1.69□□□□□ -2.14
PTCHD4Q6ZW05 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.69□□□□□ -2.14
PTCHD4Q6ZW05 RNU6-704P-201ENST00000364162 103 ntBASIC1.68□□□□□ -2.14
PTCHD4Q6ZW05 Y_RNA.420-201ENST00000384043 110 ntBASIC1.68□□□□□ -2.14
PTCHD4Q6ZW05 Y_RNA.584-201ENST00000391090 114 ntBASIC1.68□□□□□ -2.14
PTCHD4Q6ZW05 RNU6-938P-201ENST00000411285 103 ntBASIC1.68□□□□□ -2.14
PTCHD4Q6ZW05 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
PTCHD4Q6ZW05 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.68□□□□□ -2.14
PTCHD4Q6ZW05 RNU6-917P-201ENST00000516294 104 ntBASIC1.68□□□□□ -2.14
PTCHD4Q6ZW05 SNORD36C-201ENST00000516733 66 ntBASIC1.68□□□□□ -2.14
PTCHD4Q6ZW05 RNU7-181P-201ENST00000517234 74 ntBASIC1.68□□□□□ -2.14
PTCHD4Q6ZW05 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.68□□□□□ -2.14
PTCHD4Q6ZW05 MIR3122-201ENST00000577243 73 ntBASIC1.68□□□□□ -2.14
PTCHD4Q6ZW05 AC131055.1-201ENST00000584626 316 ntBASIC1.68□□□□□ -2.14
PTCHD4Q6ZW05 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.68□□□□□ -2.14
PTCHD4Q6ZW05 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.67□□□□□ -2.14
PTCHD4Q6ZW05 SNORD50.2-201ENST00000365465 70 ntBASIC1.67□□□□□ -2.14
PTCHD4Q6ZW05 RNU6-1189P-201ENST00000383958 107 ntBASIC1.67□□□□□ -2.14
PTCHD4Q6ZW05 Y_RNA.410-201ENST00000383992 113 ntBASIC1.67□□□□□ -2.14
PTCHD4Q6ZW05 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.67□□□□□ -2.14
PTCHD4Q6ZW05 RNA5SP508-201ENST00000411327 119 ntBASIC1.67□□□□□ -2.14
PTCHD4Q6ZW05 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.67□□□□□ -2.14
PTCHD4Q6ZW05 AC005908.1-201ENST00000468701 347 ntBASIC1.67□□□□□ -2.14
PTCHD4Q6ZW05 RNU6-970P-201ENST00000516312 107 ntBASIC1.67□□□□□ -2.14
PTCHD4Q6ZW05 SNORA18.7-201ENST00000516910 131 ntBASIC1.67□□□□□ -2.14
PTCHD4Q6ZW05 AP003484.1-201ENST00000530974 250 ntBASIC1.67□□□□□ -2.14
PTCHD4Q6ZW05 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.67□□□□□ -2.14
PTCHD4Q6ZW05 MIR4435-1-201ENST00000582552 80 ntBASIC1.67□□□□□ -2.14
PTCHD4Q6ZW05 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
PTCHD4Q6ZW05 AC010332.2-201ENST00000613083 1904 ntBASIC1.66□□□□□ -2.14
PTCHD4Q6ZW05 Y_RNA.52-201ENST00000362760 96 ntBASIC1.66□□□□□ -2.14
PTCHD4Q6ZW05 U8.17-201ENST00000391292 132 ntBASIC1.66□□□□□ -2.14
PTCHD4Q6ZW05 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.66□□□□□ -2.14
PTCHD4Q6ZW05 AC087499.4-201ENST00000448505 178 ntBASIC1.66□□□□□ -2.14
PTCHD4Q6ZW05 AC015688.6-201ENST00000577737 104 ntBASIC1.66□□□□□ -2.14
PTCHD4Q6ZW05 MIR3618-201ENST00000580330 88 ntBASIC1.66□□□□□ -2.14
PTCHD4Q6ZW05 MIR3910-1-201ENST00000580936 111 ntBASIC1.66□□□□□ -2.14
PTCHD4Q6ZW05 MIR5197-201ENST00000583721 112 ntBASIC1.66□□□□□ -2.14
PTCHD4Q6ZW05 AP001485.1-201ENST00000604799 199 ntBASIC1.66□□□□□ -2.14
PTCHD4Q6ZW05 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
PTCHD4Q6ZW05 U8.1-201ENST00000362843 134 ntBASIC1.65□□□□□ -2.15
PTCHD4Q6ZW05 SNORA2.2-201ENST00000365473 135 ntBASIC1.65□□□□□ -2.15
PTCHD4Q6ZW05 RNU6-257P-201ENST00000410238 98 ntBASIC1.65□□□□□ -2.15
PTCHD4Q6ZW05 AC003989.2-201ENST00000440224 169 ntBASIC1.65□□□□□ -2.15
PTCHD4Q6ZW05 MIR8063-201ENST00000621930 81 ntBASIC1.65□□□□□ -2.15
PTCHD4Q6ZW05 MTND5P32-201ENST00000560711 1802 ntBASIC1.65□□□□□ -2.15
PTCHD4Q6ZW05 ZNF355P-201ENST00000427301 3216 ntBASIC1.64□□□□□ -2.15
PTCHD4Q6ZW05 Y_RNA.241-201ENST00000364470 117 ntBASIC1.64□□□□□ -2.15
PTCHD4Q6ZW05 TMSB4XP3-201ENST00000445144 114 ntBASIC1.64□□□□□ -2.15
PTCHD4Q6ZW05 SNORD123-201ENST00000459473 70 ntBASIC1.64□□□□□ -2.15
PTCHD4Q6ZW05 Y_RNA.686-201ENST00000516548 134 ntBASIC1.64□□□□□ -2.15
PTCHD4Q6ZW05 RNU6-1149P-201ENST00000516810 97 ntBASIC1.64□□□□□ -2.15
PTCHD4Q6ZW05 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.64□□□□□ -2.15
PTCHD4Q6ZW05 AC091895.1-201ENST00000624494 256 ntBASIC1.64□□□□□ -2.15
PTCHD4Q6ZW05 RNU6-915P-201ENST00000364943 103 ntBASIC1.63□□□□□ -2.15
PTCHD4Q6ZW05 Y_RNA.440-201ENST00000384120 114 ntBASIC1.63□□□□□ -2.15
PTCHD4Q6ZW05 Y_RNA.494-201ENST00000384432 111 ntBASIC1.63□□□□□ -2.15
PTCHD4Q6ZW05 MIR653-201ENST00000385279 96 ntBASIC1.63□□□□□ -2.15
PTCHD4Q6ZW05 SNORA40-201ENST00000388090 126 ntBASIC1.63□□□□□ -2.15
PTCHD4Q6ZW05 SNORD28B-201ENST00000390993 75 ntBASIC1.63□□□□□ -2.15
PTCHD4Q6ZW05 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.63□□□□□ -2.15
PTCHD4Q6ZW05 MTND4LP9-201ENST00000427694 174 ntBASIC1.63□□□□□ -2.15
PTCHD4Q6ZW05 snoU13.9-201ENST00000458927 103 ntBASIC1.63□□□□□ -2.15
PTCHD4Q6ZW05 RPS29P11-201ENST00000496507 171 ntBASIC1.63□□□□□ -2.15
PTCHD4Q6ZW05 RNU2-60P-201ENST00000517290 128 ntBASIC1.63□□□□□ -2.15
PTCHD4Q6ZW05 AP001328.1-201ENST00000528550 176 ntBASIC1.63□□□□□ -2.15
PTCHD4Q6ZW05 AC090049.2-201ENST00000550377 109 ntBASIC1.63□□□□□ -2.15
PTCHD4Q6ZW05 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.63□□□□□ -2.15
PTCHD4Q6ZW05 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
PTCHD4Q6ZW05 Y_RNA.120-201ENST00000363304 110 ntBASIC1.62□□□□□ -2.15
PTCHD4Q6ZW05 SNORD48-201ENST00000364953 64 ntBASIC1.62□□□□□ -2.15
PTCHD4Q6ZW05 SNORA40.5-201ENST00000391061 128 ntBASIC1.62□□□□□ -2.15
PTCHD4Q6ZW05 Y_RNA.586-201ENST00000391146 98 ntBASIC1.62□□□□□ -2.15
PTCHD4Q6ZW05 HSPE1P24-201ENST00000450782 238 ntBASIC1.62□□□□□ -2.15
PTCHD4Q6ZW05 RPS26P48-201ENST00000491713 339 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms