Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AC027279.3-201ENST00000625055 122 ntBASIC1.51□□□□□ -2.17
C9orf139Q6ZV77 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.51□□□□□ -2.17
C9orf139Q6ZV77 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
C9orf139Q6ZV77 RNU1-17P-201ENST00000363022 152 ntBASIC1.5□□□□□ -2.17
C9orf139Q6ZV77 SNORA25.7-201ENST00000364375 127 ntBASIC1.5□□□□□ -2.17
C9orf139Q6ZV77 Y_RNA.336-201ENST00000365307 109 ntBASIC1.5□□□□□ -2.17
C9orf139Q6ZV77 MIR518F-201ENST00000384973 87 ntBASIC1.5□□□□□ -2.17
C9orf139Q6ZV77 MIR9-3-201ENST00000385084 90 ntBASIC1.5□□□□□ -2.17
C9orf139Q6ZV77 MIR802-201ENST00000390235 94 ntBASIC1.5□□□□□ -2.17
C9orf139Q6ZV77 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
C9orf139Q6ZV77 MIR513C-201ENST00000401352 84 ntBASIC1.5□□□□□ -2.17
C9orf139Q6ZV77 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.5□□□□□ -2.17
C9orf139Q6ZV77 SNRPGP13-201ENST00000442212 177 ntBASIC1.5□□□□□ -2.17
C9orf139Q6ZV77 RNU6-693P-201ENST00000516134 107 ntBASIC1.5□□□□□ -2.17
C9orf139Q6ZV77 MIR3935-201ENST00000583472 104 ntBASIC1.5□□□□□ -2.17
C9orf139Q6ZV77 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.5□□□□□ -2.17
C9orf139Q6ZV77 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
C9orf139Q6ZV77 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
C9orf139Q6ZV77 Y_RNA.242-201ENST00000364473 110 ntBASIC1.49□□□□□ -2.17
C9orf139Q6ZV77 RNU6-360P-201ENST00000390944 104 ntBASIC1.49□□□□□ -2.17
C9orf139Q6ZV77 RNU6-460P-201ENST00000391158 108 ntBASIC1.49□□□□□ -2.17
C9orf139Q6ZV77 MIR548O-201ENST00000408583 114 ntBASIC1.49□□□□□ -2.17
C9orf139Q6ZV77 RNU6-257P-201ENST00000410238 98 ntBASIC1.49□□□□□ -2.17
C9orf139Q6ZV77 RPL30P13-201ENST00000418873 348 ntBASIC1.49□□□□□ -2.17
C9orf139Q6ZV77 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.49□□□□□ -2.17
C9orf139Q6ZV77 TMSB4XP3-201ENST00000445144 114 ntBASIC1.49□□□□□ -2.17
C9orf139Q6ZV77 RNU7-12P-201ENST00000516030 62 ntBASIC1.49□□□□□ -2.17
C9orf139Q6ZV77 RNU7-25P-201ENST00000516544 62 ntBASIC1.49□□□□□ -2.17
C9orf139Q6ZV77 RNU6-789P-201ENST00000517105 102 ntBASIC1.49□□□□□ -2.17
C9orf139Q6ZV77 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.49□□□□□ -2.17
C9orf139Q6ZV77 MIR3129-201ENST00000581095 76 ntBASIC1.49□□□□□ -2.17
C9orf139Q6ZV77 AL365205.2-201ENST00000594586 68 ntBASIC1.49□□□□□ -2.17
C9orf139Q6ZV77 ICE2P2-201ENST00000483823 2787 ntBASIC1.49□□□□□ -2.17
C9orf139Q6ZV77 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
C9orf139Q6ZV77 AC010332.2-201ENST00000613083 1904 ntBASIC1.48□□□□□ -2.17
C9orf139Q6ZV77 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.48□□□□□ -2.17
C9orf139Q6ZV77 RNU6-833P-201ENST00000363486 107 ntBASIC1.48□□□□□ -2.17
C9orf139Q6ZV77 RNU6-203P-201ENST00000384038 104 ntBASIC1.48□□□□□ -2.17
C9orf139Q6ZV77 Y_RNA.420-201ENST00000384043 110 ntBASIC1.48□□□□□ -2.17
C9orf139Q6ZV77 AF228730.3-201ENST00000436691 102 ntBASIC1.48□□□□□ -2.17
C9orf139Q6ZV77 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.48□□□□□ -2.17
C9orf139Q6ZV77 HMGN2P32-201ENST00000444648 269 ntBASIC1.48□□□□□ -2.17
C9orf139Q6ZV77 AC093850.1-201ENST00000454121 251 ntBASIC1.48□□□□□ -2.17
C9orf139Q6ZV77 AC008834.1-201ENST00000511612 175 ntBASIC1.48□□□□□ -2.17
C9orf139Q6ZV77 RNU6-250P-201ENST00000516958 103 ntBASIC1.48□□□□□ -2.17
C9orf139Q6ZV77 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.48□□□□□ -2.17
C9orf139Q6ZV77 AP001485.1-201ENST00000604799 199 ntBASIC1.48□□□□□ -2.17
C9orf139Q6ZV77 AC084768.2-201ENST00000622736 221 ntBASIC1.48□□□□□ -2.17
C9orf139Q6ZV77 AL442644.1-201ENST00000454390 3105 ntBASIC1.48□□□□□ -2.17
C9orf139Q6ZV77 RNU6-661P-201ENST00000362409 107 ntBASIC1.47□□□□□ -2.17
C9orf139Q6ZV77 RNU6-439P-201ENST00000384188 106 ntBASIC1.47□□□□□ -2.17
C9orf139Q6ZV77 Y_RNA.547-201ENST00000384654 119 ntBASIC1.47□□□□□ -2.17
C9orf139Q6ZV77 SNORA19-201ENST00000384737 128 ntBASIC1.47□□□□□ -2.17
C9orf139Q6ZV77 MIR660-201ENST00000385235 97 ntBASIC1.47□□□□□ -2.17
C9orf139Q6ZV77 SNORD77.3-201ENST00000391113 65 ntBASIC1.47□□□□□ -2.17
C9orf139Q6ZV77 Y_RNA.586-201ENST00000391146 98 ntBASIC1.47□□□□□ -2.17
C9orf139Q6ZV77 MIR891A-201ENST00000401237 79 ntBASIC1.47□□□□□ -2.17
C9orf139Q6ZV77 MTND4LP9-201ENST00000427694 174 ntBASIC1.47□□□□□ -2.17
C9orf139Q6ZV77 PGBD4P5-201ENST00000445958 426 ntBASIC1.47□□□□□ -2.17
C9orf139Q6ZV77 MIR4778-201ENST00000577635 80 ntBASIC1.47□□□□□ -2.17
C9orf139Q6ZV77 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.47□□□□□ -2.17
C9orf139Q6ZV77 AL513423.1-201ENST00000621695 132 ntBASIC1.47□□□□□ -2.17
C9orf139Q6ZV77 AC095038.3-201ENST00000634439 195 ntBASIC1.47□□□□□ -2.17
C9orf139Q6ZV77 U2.22-201ENST00000636441 106 ntBASIC1.47□□□□□ -2.17
C9orf139Q6ZV77 MIR376A2-201ENST00000636782 80 ntBASIC1.47□□□□□ -2.17
C9orf139Q6ZV77 AC132825.6-201ENST00000638861 357 ntBASIC1.47□□□□□ -2.17
C9orf139Q6ZV77 RNU6-81P-201ENST00000365608 104 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 Y_RNA.542-201ENST00000384641 111 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 MIR194-1-201ENST00000384892 85 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 MIR30A-201ENST00000385092 71 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 MIR624-201ENST00000385217 97 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 SNORA67.5-201ENST00000391036 107 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 MIR934-201ENST00000401241 83 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 SUMO2P12-201ENST00000405924 140 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 RNA5SP127-201ENST00000411051 133 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 AC015922.2-201ENST00000435593 184 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 AC003989.2-201ENST00000440224 169 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 SNORA18.4-201ENST00000516440 124 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 SNORA25.15-201ENST00000516487 89 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 AC090142.3-201ENST00000519012 385 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 SNRPGP19-201ENST00000603826 189 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 AC103810.8-201ENST00000607347 118 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 SNORD3E-202ENST00000627253 216 ntBASIC1.46□□□□□ -2.18
C9orf139Q6ZV77 MIR424-201ENST00000362227 98 ntBASIC1.45□□□□□ -2.18
C9orf139Q6ZV77 U8.1-201ENST00000362843 134 ntBASIC1.45□□□□□ -2.18
C9orf139Q6ZV77 SNORD115-28-201ENST00000363931 81 ntBASIC1.45□□□□□ -2.18
C9orf139Q6ZV77 RNA5SP190-201ENST00000365222 118 ntBASIC1.45□□□□□ -2.18
C9orf139Q6ZV77 SNORD113-1-201ENST00000365321 69 ntBASIC1.45□□□□□ -2.18
C9orf139Q6ZV77 Y_RNA.584-201ENST00000391090 114 ntBASIC1.45□□□□□ -2.18
C9orf139Q6ZV77 AL627390.1-201ENST00000396055 340 ntBASIC1.45□□□□□ -2.18
C9orf139Q6ZV77 RNU6-938P-201ENST00000411285 103 ntBASIC1.45□□□□□ -2.18
C9orf139Q6ZV77 RN7SL274P-201ENST00000492268 272 ntBASIC1.45□□□□□ -2.18
C9orf139Q6ZV77 RNU2-60P-201ENST00000517290 128 ntBASIC1.45□□□□□ -2.18
C9orf139Q6ZV77 AC131055.1-201ENST00000584626 316 ntBASIC1.45□□□□□ -2.18
C9orf139Q6ZV77 AC015726.2-201ENST00000620112 122 ntBASIC1.45□□□□□ -2.18
C9orf139Q6ZV77 AC091895.1-201ENST00000624494 256 ntBASIC1.45□□□□□ -2.18
C9orf139Q6ZV77 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.45□□□□□ -2.18
C9orf139Q6ZV77 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms