Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MIR518A2-201ENST00000384966 87 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 RNU6-440P-201ENST00000390882 105 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 SNORA40.18-201ENST00000391200 128 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 Y_RNA.617-201ENST00000410920 90 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 AF228730.3-201ENST00000436691 102 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 SNRPGP13-201ENST00000442212 177 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 RPL23AP42-201ENST00000471152 471 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 RNU6-772P-201ENST00000516042 105 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 RNA5SP182-201ENST00000516064 82 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 RNU6-693P-201ENST00000516134 107 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 RNVU1-2-201ENST00000516326 135 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 SNORA18.4-201ENST00000516440 124 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 Y_RNA.690-201ENST00000516603 95 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 Y_RNA.692-201ENST00000516627 105 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 AC090049.2-201ENST00000550377 109 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 MIR5094-201ENST00000578766 85 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 AL359881.1-201ENST00000602916 267 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 MIR3914-2-201ENST00000637339 95 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
ZNF549Q6P9A3 RNU6-834P-201ENST00000362367 110 ntBASIC1.74□□□□□ -2.13
ZNF549Q6P9A3 SNORA16B-201ENST00000364674 135 ntBASIC1.74□□□□□ -2.13
ZNF549Q6P9A3 RNA5SP482-201ENST00000391269 118 ntBASIC1.74□□□□□ -2.13
ZNF549Q6P9A3 Y_RNA.630-201ENST00000411370 108 ntBASIC1.74□□□□□ -2.13
ZNF549Q6P9A3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.74□□□□□ -2.13
ZNF549Q6P9A3 HSPE1P9-201ENST00000440046 311 ntBASIC1.74□□□□□ -2.13
ZNF549Q6P9A3 SNORD45.4-201ENST00000516629 73 ntBASIC1.74□□□□□ -2.13
ZNF549Q6P9A3 IGKV1-22-201ENST00000524313 326 ntBASIC1.74□□□□□ -2.13
ZNF549Q6P9A3 AC069114.2-201ENST00000604699 304 ntBASIC1.74□□□□□ -2.13
ZNF549Q6P9A3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ZNF549Q6P9A3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 SNORA4.2-201ENST00000365313 147 ntBASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 RNU6-429P-201ENST00000384582 108 ntBASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 MIRLET7F2-201ENST00000385277 83 ntBASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 U8.13-201ENST00000390842 128 ntBASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 RNU11-3P-201ENST00000391111 133 ntBASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 MIR548O-201ENST00000408583 114 ntBASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 RNU6-938P-201ENST00000411285 103 ntBASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 RNU7-25P-201ENST00000516544 62 ntBASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 RNU7-28P-201ENST00000516759 62 ntBASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 SUB1P4-201ENST00000566062 339 ntBASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 Y_RNA.757-201ENST00000578934 114 ntBASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 MIR3618-201ENST00000580330 88 ntBASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 AC108081.1-201ENST00000604358 221 ntBASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ZNF549Q6P9A3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
ZNF549Q6P9A3 RNU6-1325P-201ENST00000364905 105 ntBASIC1.72□□□□□ -2.13
ZNF549Q6P9A3 Y_RNA.547-201ENST00000384654 119 ntBASIC1.72□□□□□ -2.13
ZNF549Q6P9A3 SNORA48.1-201ENST00000390879 135 ntBASIC1.72□□□□□ -2.13
ZNF549Q6P9A3 STAG3L5P-204ENST00000443759 179 ntBASIC1.72□□□□□ -2.13
ZNF549Q6P9A3 RN7SKP179-201ENST00000516126 217 ntBASIC1.72□□□□□ -2.13
ZNF549Q6P9A3 Y_RNA.714-201ENST00000517065 90 ntBASIC1.72□□□□□ -2.13
ZNF549Q6P9A3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.72□□□□□ -2.13
ZNF549Q6P9A3 MIR3122-201ENST00000577243 73 ntBASIC1.72□□□□□ -2.13
ZNF549Q6P9A3 MIR5197-201ENST00000583721 112 ntBASIC1.72□□□□□ -2.13
ZNF549Q6P9A3 AL022345.2-201ENST00000606307 135 ntBASIC1.72□□□□□ -2.13
ZNF549Q6P9A3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.72□□□□□ -2.13
ZNF549Q6P9A3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.72□□□□□ -2.13
ZNF549Q6P9A3 AC131280.1-202ENST00000624067 4211 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 Y_RNA.242-201ENST00000364473 110 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 Y_RNA.265-201ENST00000364677 108 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 snoU2-30.1-201ENST00000365012 70 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 SNORD58C-201ENST00000365223 64 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 RNU6-442P-201ENST00000383968 104 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 RNU6-44P-201ENST00000384045 107 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 RNU6-296P-201ENST00000384608 107 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 MIR583-201ENST00000384846 75 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 MIR17-201ENST00000385012 84 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 RNA5SP465-201ENST00000391195 109 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 RNU6-781P-201ENST00000516377 101 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 RNU6-1149P-201ENST00000516810 97 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 RNA5SP437-201ENST00000517249 129 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 DEFB122-202ENST00000569013 197 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 MIR4524B-201ENST00000581569 115 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 AC012493.3-201ENST00000604494 112 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 AC008555.8-201ENST00000623602 2168 ntBASIC1.71□□□□□ -2.14
ZNF549Q6P9A3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
ZNF549Q6P9A3 SNORD14E-201ENST00000364009 85 ntBASIC1.7□□□□□ -2.14
ZNF549Q6P9A3 Y_RNA.336-201ENST00000365307 109 ntBASIC1.7□□□□□ -2.14
ZNF549Q6P9A3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
ZNF549Q6P9A3 RNA5SP501-201ENST00000410990 112 ntBASIC1.7□□□□□ -2.14
ZNF549Q6P9A3 AL356379.1-201ENST00000414105 126 ntBASIC1.7□□□□□ -2.14
ZNF549Q6P9A3 AL035461.1-201ENST00000421490 332 ntBASIC1.7□□□□□ -2.14
ZNF549Q6P9A3 CALM2P4-201ENST00000430810 426 ntBASIC1.7□□□□□ -2.14
ZNF549Q6P9A3 snoU13.23-201ENST00000458863 104 ntBASIC1.7□□□□□ -2.14
ZNF549Q6P9A3 RPL23AP63-201ENST00000498752 471 ntBASIC1.7□□□□□ -2.14
ZNF549Q6P9A3 AC114811.1-201ENST00000507207 168 ntBASIC1.7□□□□□ -2.14
ZNF549Q6P9A3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.7□□□□□ -2.14
ZNF549Q6P9A3 RNU6-295P-201ENST00000516901 104 ntBASIC1.7□□□□□ -2.14
ZNF549Q6P9A3 MIR6845-201ENST00000613182 61 ntBASIC1.7□□□□□ -2.14
ZNF549Q6P9A3 AC084768.2-201ENST00000622736 221 ntBASIC1.7□□□□□ -2.14
ZNF549Q6P9A3 AC245060.5-201ENST00000610778 3293 ntBASIC1.7□□□□□ -2.14
ZNF549Q6P9A3 RNU6-1084P-201ENST00000362498 107 ntBASIC1.69□□□□□ -2.14
ZNF549Q6P9A3 Y_RNA.37-201ENST00000362606 108 ntBASIC1.69□□□□□ -2.14
ZNF549Q6P9A3 RNU6-112P-201ENST00000363599 104 ntBASIC1.69□□□□□ -2.14
ZNF549Q6P9A3 RNU6-647P-201ENST00000364243 107 ntBASIC1.69□□□□□ -2.14
ZNF549Q6P9A3 RNU6-1144P-201ENST00000384247 104 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 581.3 ms