Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 RNU6-592P-201ENST00000411333 103 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 AC018710.1-201ENST00000506509 158 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 AC079140.5-201ENST00000507882 310 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 RNU6-397P-201ENST00000516226 104 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 MTND1P5-201ENST00000517906 940 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 AC073539.2-201ENST00000597113 165 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 AC109347.2-201ENST00000610220 349 ntBASIC-1.2□□□□□ -2.6
VPS13DQ5THJ4 RNA5SP403-201ENST00000363598 108 ntBASIC-1.21□□□□□ -2.6
VPS13DQ5THJ4 RNU4-24P-201ENST00000364565 139 ntBASIC-1.21□□□□□ -2.6
VPS13DQ5THJ4 MIR217-201ENST00000384817 110 ntBASIC-1.21□□□□□ -2.6
VPS13DQ5THJ4 RNU6-323P-201ENST00000521915 107 ntBASIC-1.21□□□□□ -2.6
VPS13DQ5THJ4 AC022616.4-201ENST00000522985 181 ntBASIC-1.21□□□□□ -2.6
VPS13DQ5THJ4 AL133215.3-201ENST00000609801 448 ntBASIC-1.21□□□□□ -2.6
VPS13DQ5THJ4 AC107905.1-201ENST00000616204 426 ntBASIC-1.21□□□□□ -2.6
VPS13DQ5THJ4 MIR539-201ENST00000365690 78 ntBASIC-1.21□□□□□ -2.6
VPS13DQ5THJ4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.21□□□□□ -2.6
VPS13DQ5THJ4 AC010598.1-201ENST00000510378 103 ntBASIC-1.21□□□□□ -2.6
VPS13DQ5THJ4 RNU6-583P-201ENST00000516012 92 ntBASIC-1.21□□□□□ -2.6
VPS13DQ5THJ4 RNU6-168P-201ENST00000516189 101 ntBASIC-1.21□□□□□ -2.6
VPS13DQ5THJ4 AC060788.1-201ENST00000521318 469 ntBASIC-1.21□□□□□ -2.6
VPS13DQ5THJ4 AC231657.1-201ENST00000624313 397 ntBASIC-1.21□□□□□ -2.6
VPS13DQ5THJ4 RNU6-841P-201ENST00000383872 107 ntBASIC-1.21□□□□□ -2.6
VPS13DQ5THJ4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.21□□□□□ -2.6
VPS13DQ5THJ4 RNA5SP54-201ENST00000516951 92 ntBASIC-1.21□□□□□ -2.6
VPS13DQ5THJ4 RNU2-51P-201ENST00000410708 197 ntBASIC-1.22□□□□□ -2.6
VPS13DQ5THJ4 RNU6-430P-201ENST00000517078 107 ntBASIC-1.22□□□□□ -2.6
VPS13DQ5THJ4 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.22□□□□□ -2.6
VPS13DQ5THJ4 AC005972.2-201ENST00000604690 348 ntBASIC-1.22□□□□□ -2.6
VPS13DQ5THJ4 MIR8055-201ENST00000610739 97 ntBASIC-1.22□□□□□ -2.6
VPS13DQ5THJ4 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.22□□□□□ -2.6
VPS13DQ5THJ4 MIR548AY-201ENST00000617669 107 ntBASIC-1.22□□□□□ -2.6
VPS13DQ5THJ4 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.22□□□□□ -2.6
VPS13DQ5THJ4 RNU6-946P-201ENST00000383878 107 ntBASIC-1.22□□□□□ -2.6
VPS13DQ5THJ4 RNU6-549P-201ENST00000384433 107 ntBASIC-1.22□□□□□ -2.6
VPS13DQ5THJ4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
VPS13DQ5THJ4 BX295541.1-201ENST00000417774 250 ntBASIC-1.22□□□□□ -2.6
VPS13DQ5THJ4 MIR548AE1-201ENST00000583292 70 ntBASIC-1.22□□□□□ -2.6
VPS13DQ5THJ4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.22□□□□□ -2.6
VPS13DQ5THJ4 AC127459.3-201ENST00000624328 466 ntBASIC-1.22□□□□□ -2.6
VPS13DQ5THJ4 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.22□□□□□ -2.6
VPS13DQ5THJ4 AC079248.2-201ENST00000623779 326 ntBASIC-1.22□□□□□ -2.6
VPS13DQ5THJ4 AC090616.4-201ENST00000448026 115 ntBASIC-1.22□□□□□ -2.61
VPS13DQ5THJ4 RNU6-958P-201ENST00000516995 106 ntBASIC-1.22□□□□□ -2.61
VPS13DQ5THJ4 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.22□□□□□ -2.61
VPS13DQ5THJ4 AC093783.1-201ENST00000612976 329 ntBASIC-1.22□□□□□ -2.61
VPS13DQ5THJ4 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 RNY4P9-201ENST00000363194 97 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 SNORA51.5-201ENST00000384126 131 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 SNORA27.1-201ENST00000362604 124 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 SNORA69-201ENST00000383895 132 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 SNORA18-201ENST00000384416 132 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 RPL22P17-201ENST00000438729 315 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 U6.109-201ENST00000636749 87 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 RNU6-117P-201ENST00000365415 107 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 ELOCP17-201ENST00000414751 326 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 RNU6-803P-201ENST00000516034 102 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 RNU6-64P-201ENST00000517119 105 ntBASIC-1.23□□□□□ -2.61
VPS13DQ5THJ4 SNORD51.1-201ENST00000365405 77 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 RNU4-88P-201ENST00000411220 86 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 AC108059.2-201ENST00000434626 151 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 AC093423.1-201ENST00000440817 142 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 MIR3123-201ENST00000583417 75 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 AC016252.1-201ENST00000609721 474 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 RMST_10.1-201ENST00000616309 154 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 RNA5SP26-201ENST00000362406 119 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 RNU6-354P-201ENST00000383862 107 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 RNU6-610P-201ENST00000384264 107 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 RNA5SP494-201ENST00000410653 129 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 AC068339.1-201ENST00000526965 141 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 AC027807.2-201ENST00000616099 408 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 MIR519E-201ENST00000385075 84 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 FRG2DP-202ENST00000566967 323 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 YWHAEP2-201ENST00000580066 112 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 AC145423.2-201ENST00000610631 239 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 AC133104.2-201ENST00000615272 193 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 RNU6-371P-201ENST00000364283 108 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 SNORD50B-201ENST00000364995 70 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 AC114982.2-201ENST00000461396 358 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 AL359881.1-201ENST00000602916 267 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 AC072046.2-201ENST00000618366 268 ntBASIC-1.24□□□□□ -2.61
VPS13DQ5THJ4 RNU6-325P-201ENST00000411132 105 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms