Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 RNU6-663P-201ENST00000391105 106 ntBASIC5.1□□□□□ -1.59
NCBP3Q53F19 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC5.1□□□□□ -1.59
NCBP3Q53F19 AC019176.2-201ENST00000611579 315 ntBASIC5.1□□□□□ -1.59
NCBP3Q53F19 NEAT1_2.1-201ENST00000620525 105 ntBASIC5.1□□□□□ -1.59
NCBP3Q53F19 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NCBP3Q53F19 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
NCBP3Q53F19 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.09□□□□□ -1.59
NCBP3Q53F19 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
NCBP3Q53F19 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.09□□□□□ -1.59
NCBP3Q53F19 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
NCBP3Q53F19 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NCBP3Q53F19 AL161431.1-201ENST00000618966 4205 ntBASIC5.08□□□□□ -1.6
NCBP3Q53F19 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.08□□□□□ -1.6
NCBP3Q53F19 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NCBP3Q53F19 MIR548U-201ENST00000390728 81 ntBASIC5.08□□□□□ -1.6
NCBP3Q53F19 AC099513.1-201ENST00000490423 301 ntBASIC5.08□□□□□ -1.6
NCBP3Q53F19 AC020914.4-201ENST00000597690 277 ntBASIC5.08□□□□□ -1.6
NCBP3Q53F19 AL137849.1-201ENST00000604767 169 ntBASIC5.08□□□□□ -1.6
NCBP3Q53F19 MIR6500-201ENST00000622700 86 ntBASIC5.08□□□□□ -1.6
NCBP3Q53F19 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NCBP3Q53F19 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCBP3Q53F19 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC5.07□□□□□ -1.6
NCBP3Q53F19 Y_RNA.12-201ENST00000362393 112 ntBASIC5.07□□□□□ -1.6
NCBP3Q53F19 RNA5SP283-201ENST00000365604 119 ntBASIC5.07□□□□□ -1.6
NCBP3Q53F19 MIR23A-201ENST00000385245 73 ntBASIC5.07□□□□□ -1.6
NCBP3Q53F19 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NCBP3Q53F19 SNORA3.3-201ENST00000408712 125 ntBASIC5.07□□□□□ -1.6
NCBP3Q53F19 AC104389.3-201ENST00000445629 235 ntBASIC5.07□□□□□ -1.6
NCBP3Q53F19 CYCSP30-201ENST00000546447 172 ntBASIC5.07□□□□□ -1.6
NCBP3Q53F19 U7.8-201ENST00000619968 63 ntBASIC5.07□□□□□ -1.6
NCBP3Q53F19 MIR4251-201ENST00000635819 61 ntBASIC5.07□□□□□ -1.6
NCBP3Q53F19 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
NCBP3Q53F19 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NCBP3Q53F19 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC5.06□□□□□ -1.6
NCBP3Q53F19 SNORD36A-201ENST00000362874 73 ntBASIC5.06□□□□□ -1.6
NCBP3Q53F19 MIR516A2-201ENST00000384888 90 ntBASIC5.06□□□□□ -1.6
NCBP3Q53F19 MIR516A1-201ENST00000385033 90 ntBASIC5.06□□□□□ -1.6
NCBP3Q53F19 RNU6ATAC42P-201ENST00000408637 95 ntBASIC5.06□□□□□ -1.6
NCBP3Q53F19 AC011753.1-201ENST00000451001 220 ntBASIC5.06□□□□□ -1.6
NCBP3Q53F19 RNU6-75P-201ENST00000515944 104 ntBASIC5.06□□□□□ -1.6
NCBP3Q53F19 RNVU1-2-201ENST00000516326 135 ntBASIC5.06□□□□□ -1.6
NCBP3Q53F19 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NCBP3Q53F19 Y_RNA.119-201ENST00000363301 96 ntBASIC5.05□□□□□ -1.6
NCBP3Q53F19 RNU1-91P-201ENST00000364746 163 ntBASIC5.05□□□□□ -1.6
NCBP3Q53F19 Y_RNA.283-201ENST00000364798 112 ntBASIC5.05□□□□□ -1.6
NCBP3Q53F19 SNORA62.3-201ENST00000365110 153 ntBASIC5.05□□□□□ -1.6
NCBP3Q53F19 SNORD115-31-201ENST00000365318 82 ntBASIC5.05□□□□□ -1.6
NCBP3Q53F19 SNORA8.1-201ENST00000384250 140 ntBASIC5.05□□□□□ -1.6
NCBP3Q53F19 MIR554-201ENST00000384874 96 ntBASIC5.05□□□□□ -1.6
NCBP3Q53F19 RHEBP3-201ENST00000411920 351 ntBASIC5.05□□□□□ -1.6
NCBP3Q53F19 VTRNA2-2P-201ENST00000516091 103 ntBASIC5.05□□□□□ -1.6
NCBP3Q53F19 SUB1P4-201ENST00000566062 339 ntBASIC5.05□□□□□ -1.6
NCBP3Q53F19 MIR3935-201ENST00000583472 104 ntBASIC5.05□□□□□ -1.6
NCBP3Q53F19 AL357312.1-201ENST00000603879 298 ntBASIC5.05□□□□□ -1.6
NCBP3Q53F19 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NCBP3Q53F19 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NCBP3Q53F19 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NCBP3Q53F19 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NCBP3Q53F19 RNU6-243P-201ENST00000391140 107 ntBASIC5.04□□□□□ -1.6
NCBP3Q53F19 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.04□□□□□ -1.6
NCBP3Q53F19 AC093423.1-201ENST00000440817 142 ntBASIC5.04□□□□□ -1.6
NCBP3Q53F19 snoU13.27-201ENST00000459278 104 ntBASIC5.04□□□□□ -1.6
NCBP3Q53F19 RNA5SP445-201ENST00000515889 115 ntBASIC5.04□□□□□ -1.6
NCBP3Q53F19 MIR4429-201ENST00000580105 73 ntBASIC5.04□□□□□ -1.6
NCBP3Q53F19 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NCBP3Q53F19 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
NCBP3Q53F19 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
NCBP3Q53F19 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NCBP3Q53F19 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
NCBP3Q53F19 WWP1P1-201ENST00000466609 2769 ntBASIC5.03□□□□□ -1.6
NCBP3Q53F19 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NCBP3Q53F19 MAPK10-373ENST00000641983 6772 ntBASIC5.03□□□□□ -1.6
NCBP3Q53F19 RNU6-1254P-201ENST00000391266 104 ntBASIC5.03□□□□□ -1.6
NCBP3Q53F19 MIR4286-201ENST00000580651 93 ntBASIC5.03□□□□□ -1.6
NCBP3Q53F19 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
NCBP3Q53F19 AC131280.1-202ENST00000624067 4211 ntBASIC5.02□□□□□ -1.61
NCBP3Q53F19 MIRLET7F1-201ENST00000362202 87 ntBASIC5.02□□□□□ -1.61
NCBP3Q53F19 MIR424-201ENST00000362227 98 ntBASIC5.02□□□□□ -1.61
NCBP3Q53F19 HMGN2P39-201ENST00000398005 273 ntBASIC5.02□□□□□ -1.61
NCBP3Q53F19 RNU7-156P-201ENST00000517214 74 ntBASIC5.02□□□□□ -1.61
NCBP3Q53F19 MIR3126-201ENST00000577443 74 ntBASIC5.02□□□□□ -1.61
NCBP3Q53F19 YWHAEP2-201ENST00000580066 112 ntBASIC5.02□□□□□ -1.61
NCBP3Q53F19 YWHAEP3-201ENST00000582767 121 ntBASIC5.02□□□□□ -1.61
NCBP3Q53F19 MIR5187-201ENST00000583479 76 ntBASIC5.02□□□□□ -1.61
NCBP3Q53F19 SNORD92-201ENST00000585078 85 ntBASIC5.02□□□□□ -1.61
NCBP3Q53F19 AC022149.2-201ENST00000621061 203 ntBASIC5.02□□□□□ -1.61
NCBP3Q53F19 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NCBP3Q53F19 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NCBP3Q53F19 MIR670-201ENST00000390142 98 ntBASIC5.01□□□□□ -1.61
NCBP3Q53F19 SNORD90-201ENST00000391145 111 ntBASIC5.01□□□□□ -1.61
NCBP3Q53F19 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.01□□□□□ -1.61
NCBP3Q53F19 RPS29P7-201ENST00000439662 171 ntBASIC5.01□□□□□ -1.61
NCBP3Q53F19 AL591424.2-201ENST00000617023 128 ntBASIC5.01□□□□□ -1.61
NCBP3Q53F19 MIR6875-201ENST00000617506 72 ntBASIC5.01□□□□□ -1.61
NCBP3Q53F19 AC034229.5-201ENST00000624258 185 ntBASIC5.01□□□□□ -1.61
NCBP3Q53F19 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
NCBP3Q53F19 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
NCBP3Q53F19 ATP5A1P2-201ENST00000412323 255 ntBASIC5□□□□□ -1.61
NCBP3Q53F19 RN7SL93P-201ENST00000463035 293 ntBASIC5□□□□□ -1.61
NCBP3Q53F19 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms