Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 MIR634-201ENST00000385208 97 ntBASIC3.1□□□□□ -1.91
TMEM259Q4ZIN3 RNU6-1319P-201ENST00000390855 104 ntBASIC3.1□□□□□ -1.91
TMEM259Q4ZIN3 RNU6-747P-201ENST00000390928 104 ntBASIC3.1□□□□□ -1.91
TMEM259Q4ZIN3 RNU6-241P-201ENST00000391148 104 ntBASIC3.1□□□□□ -1.91
TMEM259Q4ZIN3 MIR1912-201ENST00000410389 80 ntBASIC3.1□□□□□ -1.91
TMEM259Q4ZIN3 RNU6-177P-201ENST00000411257 104 ntBASIC3.1□□□□□ -1.91
TMEM259Q4ZIN3 POLR2J4-204ENST00000418424 324 ntBASIC3.1□□□□□ -1.91
TMEM259Q4ZIN3 AC099513.1-201ENST00000490423 301 ntBASIC3.1□□□□□ -1.91
TMEM259Q4ZIN3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.1□□□□□ -1.91
TMEM259Q4ZIN3 FAM106DP-201ENST00000586416 501 ntBASIC3.1□□□□□ -1.91
TMEM259Q4ZIN3 AC243994.1-201ENST00000618627 109 ntBASIC3.1□□□□□ -1.91
TMEM259Q4ZIN3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.1□□□□□ -1.91
TMEM259Q4ZIN3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TMEM259Q4ZIN3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
TMEM259Q4ZIN3 MIR526A1-201ENST00000384897 85 ntBASIC3.09□□□□□ -1.91
TMEM259Q4ZIN3 SNORD28B-201ENST00000390993 75 ntBASIC3.09□□□□□ -1.91
TMEM259Q4ZIN3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.09□□□□□ -1.91
TMEM259Q4ZIN3 RPS23P4-201ENST00000487908 423 ntBASIC3.09□□□□□ -1.91
TMEM259Q4ZIN3 MIR4529-201ENST00000578110 78 ntBASIC3.09□□□□□ -1.91
TMEM259Q4ZIN3 MIR6733-201ENST00000635723 61 ntBASIC3.09□□□□□ -1.91
TMEM259Q4ZIN3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 MIR494-201ENST00000349529 81 ntBASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 MIR424-201ENST00000362227 98 ntBASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 Y_RNA.171-201ENST00000363760 102 ntBASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 SNORA3A-201ENST00000364113 130 ntBASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 Y_RNA.299-201ENST00000364973 94 ntBASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 RNA5SP261-201ENST00000410536 106 ntBASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 RNA5SP100-201ENST00000410903 110 ntBASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 RNA5SP59-201ENST00000410922 110 ntBASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 AC103810.6-201ENST00000606708 136 ntBASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 MIR4791-201ENST00000607666 84 ntBASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 AC087741.2-201ENST00000619415 172 ntBASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.08□□□□□ -1.92
TMEM259Q4ZIN3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TMEM259Q4ZIN3 RNU6-457P-201ENST00000363999 107 ntBASIC3.07□□□□□ -1.92
TMEM259Q4ZIN3 Y_RNA.507-201ENST00000384500 99 ntBASIC3.07□□□□□ -1.92
TMEM259Q4ZIN3 RNU6-1275P-201ENST00000391087 107 ntBASIC3.07□□□□□ -1.92
TMEM259Q4ZIN3 RNA5SP450-201ENST00000411206 102 ntBASIC3.07□□□□□ -1.92
TMEM259Q4ZIN3 RNA5SP57-201ENST00000459463 123 ntBASIC3.07□□□□□ -1.92
TMEM259Q4ZIN3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.07□□□□□ -1.92
TMEM259Q4ZIN3 DNAJC19P9-201ENST00000555084 351 ntBASIC3.07□□□□□ -1.92
TMEM259Q4ZIN3 MIR4298-201ENST00000584380 73 ntBASIC3.07□□□□□ -1.92
TMEM259Q4ZIN3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TMEM259Q4ZIN3 SNORA22.1-201ENST00000362701 134 ntBASIC3.06□□□□□ -1.92
TMEM259Q4ZIN3 Y_RNA.78-201ENST00000362970 110 ntBASIC3.06□□□□□ -1.92
TMEM259Q4ZIN3 VTRNA1-1-201ENST00000363120 99 ntBASIC3.06□□□□□ -1.92
TMEM259Q4ZIN3 RNY1P10-201ENST00000363268 113 ntBASIC3.06□□□□□ -1.92
TMEM259Q4ZIN3 SNORA71.1-201ENST00000364523 117 ntBASIC3.06□□□□□ -1.92
TMEM259Q4ZIN3 RNU1-52P-201ENST00000384190 164 ntBASIC3.06□□□□□ -1.92
TMEM259Q4ZIN3 SNORD67-201ENST00000390833 111 ntBASIC3.06□□□□□ -1.92
TMEM259Q4ZIN3 SNORD88.1-201ENST00000408684 91 ntBASIC3.06□□□□□ -1.92
TMEM259Q4ZIN3 RN7SL20P-201ENST00000488827 297 ntBASIC3.06□□□□□ -1.92
TMEM259Q4ZIN3 RNU7-193P-201ENST00000516723 65 ntBASIC3.06□□□□□ -1.92
TMEM259Q4ZIN3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.06□□□□□ -1.92
TMEM259Q4ZIN3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.06□□□□□ -1.92
TMEM259Q4ZIN3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
TMEM259Q4ZIN3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.06□□□□□ -1.92
TMEM259Q4ZIN3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TMEM259Q4ZIN3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TMEM259Q4ZIN3 MIR22-201ENST00000362190 85 ntBASIC3.05□□□□□ -1.92
TMEM259Q4ZIN3 RNU1-138P-201ENST00000384093 164 ntBASIC3.05□□□□□ -1.92
TMEM259Q4ZIN3 RNU4-69P-201ENST00000410677 143 ntBASIC3.05□□□□□ -1.92
TMEM259Q4ZIN3 MTATP8P2-201ENST00000435212 202 ntBASIC3.05□□□□□ -1.92
TMEM259Q4ZIN3 RN7SKP12-201ENST00000516275 143 ntBASIC3.05□□□□□ -1.92
TMEM259Q4ZIN3 RNA5SP33-201ENST00000516687 98 ntBASIC3.05□□□□□ -1.92
TMEM259Q4ZIN3 SNORA31.17-201ENST00000516953 127 ntBASIC3.05□□□□□ -1.92
TMEM259Q4ZIN3 SNORA31.25-201ENST00000517242 134 ntBASIC3.05□□□□□ -1.92
TMEM259Q4ZIN3 AL033523.1-201ENST00000605153 153 ntBASIC3.05□□□□□ -1.92
TMEM259Q4ZIN3 MALAT1.1-201ENST00000618249 95 ntBASIC3.05□□□□□ -1.92
TMEM259Q4ZIN3 AC095038.3-201ENST00000634439 195 ntBASIC3.05□□□□□ -1.92
TMEM259Q4ZIN3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TMEM259Q4ZIN3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TMEM259Q4ZIN3 AC073325.2-201ENST00000339545 159 ntBASIC3.04□□□□□ -1.92
TMEM259Q4ZIN3 RNU6-661P-201ENST00000362409 107 ntBASIC3.04□□□□□ -1.92
TMEM259Q4ZIN3 Y_RNA.155-201ENST00000363632 101 ntBASIC3.04□□□□□ -1.92
TMEM259Q4ZIN3 SNORA80A-201ENST00000363922 136 ntBASIC3.04□□□□□ -1.92
TMEM259Q4ZIN3 RNU6-360P-201ENST00000390944 104 ntBASIC3.04□□□□□ -1.92
TMEM259Q4ZIN3 COTL1P1-201ENST00000422309 375 ntBASIC3.04□□□□□ -1.92
TMEM259Q4ZIN3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.04□□□□□ -1.92
TMEM259Q4ZIN3 AC113410.1-201ENST00000505029 247 ntBASIC3.04□□□□□ -1.92
TMEM259Q4ZIN3 RNU2-13P-201ENST00000515909 113 ntBASIC3.04□□□□□ -1.92
TMEM259Q4ZIN3 RNU6-1258P-201ENST00000516911 111 ntBASIC3.04□□□□□ -1.92
TMEM259Q4ZIN3 AP003327.1-201ENST00000529684 127 ntBASIC3.04□□□□□ -1.92
TMEM259Q4ZIN3 Y_RNA.818-201ENST00000618813 71 ntBASIC3.04□□□□□ -1.92
TMEM259Q4ZIN3 AC006386.2-201ENST00000624491 75 ntBASIC3.04□□□□□ -1.92
TMEM259Q4ZIN3 AC012005.1-201ENST00000624575 75 ntBASIC3.04□□□□□ -1.92
TMEM259Q4ZIN3 MIR203B-201ENST00000636080 86 ntBASIC3.04□□□□□ -1.92
TMEM259Q4ZIN3 Y_RNA.220-201ENST00000364244 109 ntBASIC3.03□□□□□ -1.92
TMEM259Q4ZIN3 RNU4-36P-201ENST00000364294 144 ntBASIC3.03□□□□□ -1.92
TMEM259Q4ZIN3 Y_RNA.342-201ENST00000365352 113 ntBASIC3.03□□□□□ -1.92
TMEM259Q4ZIN3 SNORA24-201ENST00000384096 131 ntBASIC3.03□□□□□ -1.92
TMEM259Q4ZIN3 RPL23AP6-201ENST00000446637 472 ntBASIC3.03□□□□□ -1.92
TMEM259Q4ZIN3 AP004217.1-201ENST00000480579 346 ntBASIC3.03□□□□□ -1.92
TMEM259Q4ZIN3 DEFB131E-201ENST00000532329 154 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms