Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AL035461.1-201ENST00000421490 332 ntBASIC1.85□□□□□ -2.11
DDR1Q08345 HSPE1P21-201ENST00000438283 308 ntBASIC1.85□□□□□ -2.11
DDR1Q08345 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.85□□□□□ -2.11
DDR1Q08345 RNU7-107P-201ENST00000459121 61 ntBASIC1.85□□□□□ -2.11
DDR1Q08345 RNU7-115P-201ENST00000516433 55 ntBASIC1.85□□□□□ -2.11
DDR1Q08345 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.85□□□□□ -2.11
DDR1Q08345 RNU7-172P-201ENST00000517125 64 ntBASIC1.85□□□□□ -2.11
DDR1Q08345 AP003357.1-201ENST00000604497 148 ntBASIC1.85□□□□□ -2.11
DDR1Q08345 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.85□□□□□ -2.11
DDR1Q08345 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.85□□□□□ -2.11
DDR1Q08345 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.85□□□□□ -2.11
DDR1Q08345 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
DDR1Q08345 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
DDR1Q08345 MIR367-201ENST00000362299 68 ntBASIC1.84□□□□□ -2.11
DDR1Q08345 MIR1278-201ENST00000408753 81 ntBASIC1.84□□□□□ -2.11
DDR1Q08345 RNU6-588P-201ENST00000410281 105 ntBASIC1.84□□□□□ -2.11
DDR1Q08345 AC005972.2-201ENST00000604690 348 ntBASIC1.84□□□□□ -2.11
DDR1Q08345 AL391903.3-201ENST00000612158 163 ntBASIC1.84□□□□□ -2.11
DDR1Q08345 AL359075.3-201ENST00000613288 217 ntBASIC1.84□□□□□ -2.11
DDR1Q08345 MIR548AY-201ENST00000617669 107 ntBASIC1.84□□□□□ -2.11
DDR1Q08345 SNORA63.4-201ENST00000362763 126 ntBASIC1.83□□□□□ -2.12
DDR1Q08345 RNU6-1082P-201ENST00000364574 107 ntBASIC1.83□□□□□ -2.12
DDR1Q08345 RNU6-1325P-201ENST00000364905 105 ntBASIC1.83□□□□□ -2.12
DDR1Q08345 Y_RNA.337-201ENST00000365312 102 ntBASIC1.83□□□□□ -2.12
DDR1Q08345 RNU6-1228P-201ENST00000391014 107 ntBASIC1.83□□□□□ -2.12
DDR1Q08345 MIR934-201ENST00000401241 83 ntBASIC1.83□□□□□ -2.12
DDR1Q08345 SNORA36B-201ENST00000410438 131 ntBASIC1.83□□□□□ -2.12
DDR1Q08345 MIR4724-201ENST00000579485 89 ntBASIC1.83□□□□□ -2.12
DDR1Q08345 AL359881.1-201ENST00000602916 267 ntBASIC1.83□□□□□ -2.12
DDR1Q08345 AC103810.8-201ENST00000607347 118 ntBASIC1.83□□□□□ -2.12
DDR1Q08345 AC011603.4-201ENST00000611325 277 ntBASIC1.83□□□□□ -2.12
DDR1Q08345 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.83□□□□□ -2.12
DDR1Q08345 SNORD45.3-201ENST00000363836 72 ntBASIC1.82□□□□□ -2.12
DDR1Q08345 RNU6-1019P-201ENST00000364424 107 ntBASIC1.82□□□□□ -2.12
DDR1Q08345 Y_RNA.273-201ENST00000364703 102 ntBASIC1.82□□□□□ -2.12
DDR1Q08345 RNU6-42P-201ENST00000384165 107 ntBASIC1.82□□□□□ -2.12
DDR1Q08345 MIR520A-201ENST00000384862 85 ntBASIC1.82□□□□□ -2.12
DDR1Q08345 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.82□□□□□ -2.12
DDR1Q08345 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.82□□□□□ -2.12
DDR1Q08345 AC245047.4-201ENST00000433189 144 ntBASIC1.82□□□□□ -2.12
DDR1Q08345 RPS27P1-201ENST00000450552 247 ntBASIC1.82□□□□□ -2.12
DDR1Q08345 RNA5SP481-201ENST00000516814 122 ntBASIC1.82□□□□□ -2.12
DDR1Q08345 RNU2-56P-201ENST00000516826 190 ntBASIC1.82□□□□□ -2.12
DDR1Q08345 AC127455.1-201ENST00000565496 145 ntBASIC1.82□□□□□ -2.12
DDR1Q08345 MIR5094-201ENST00000578766 85 ntBASIC1.82□□□□□ -2.12
DDR1Q08345 AC073413.2-201ENST00000604332 360 ntBASIC1.82□□□□□ -2.12
DDR1Q08345 RNU6-153P-201ENST00000364422 104 ntBASIC1.81□□□□□ -2.12
DDR1Q08345 RNA5SP363-201ENST00000365072 115 ntBASIC1.81□□□□□ -2.12
DDR1Q08345 Y_RNA.521-201ENST00000384560 114 ntBASIC1.81□□□□□ -2.12
DDR1Q08345 RNU6-429P-201ENST00000384582 108 ntBASIC1.81□□□□□ -2.12
DDR1Q08345 RPS4XP11-201ENST00000446897 772 ntBASIC1.81□□□□□ -2.12
DDR1Q08345 RNU6-659P-201ENST00000516454 104 ntBASIC1.81□□□□□ -2.12
DDR1Q08345 RNA5SP480-201ENST00000516840 109 ntBASIC1.81□□□□□ -2.12
DDR1Q08345 RNU7-116P-201ENST00000516940 62 ntBASIC1.81□□□□□ -2.12
DDR1Q08345 AC120024.3-201ENST00000603167 156 ntBASIC1.81□□□□□ -2.12
DDR1Q08345 MIR8074-201ENST00000615081 81 ntBASIC1.81□□□□□ -2.12
DDR1Q08345 MIR6844-201ENST00000637122 62 ntBASIC1.81□□□□□ -2.12
DDR1Q08345 RNU6-235P-201ENST00000362644 107 ntBASIC1.8□□□□□ -2.12
DDR1Q08345 RNU6-112P-201ENST00000363599 104 ntBASIC1.8□□□□□ -2.12
DDR1Q08345 SNORA63D-201ENST00000364359 132 ntBASIC1.8□□□□□ -2.12
DDR1Q08345 Y_RNA.251-201ENST00000364551 99 ntBASIC1.8□□□□□ -2.12
DDR1Q08345 RNU6-915P-201ENST00000364943 103 ntBASIC1.8□□□□□ -2.12
DDR1Q08345 RNU6-144P-201ENST00000383951 107 ntBASIC1.8□□□□□ -2.12
DDR1Q08345 RNU6-80P-201ENST00000384195 107 ntBASIC1.8□□□□□ -2.12
DDR1Q08345 RNU6-997P-201ENST00000384725 107 ntBASIC1.8□□□□□ -2.12
DDR1Q08345 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
DDR1Q08345 RNU6-1186P-201ENST00000410429 97 ntBASIC1.8□□□□□ -2.12
DDR1Q08345 RNU2-7P-201ENST00000410794 178 ntBASIC1.8□□□□□ -2.12
DDR1Q08345 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.8□□□□□ -2.12
DDR1Q08345 AL163195.1-201ENST00000496941 348 ntBASIC1.8□□□□□ -2.12
DDR1Q08345 RNU1-142P-201ENST00000516682 145 ntBASIC1.8□□□□□ -2.12
DDR1Q08345 RNU6-919P-201ENST00000516731 104 ntBASIC1.8□□□□□ -2.12
DDR1Q08345 MIR5688-201ENST00000580619 83 ntBASIC1.8□□□□□ -2.12
DDR1Q08345 MIR6129-201ENST00000616087 109 ntBASIC1.8□□□□□ -2.12
DDR1Q08345 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.8□□□□□ -2.12
DDR1Q08345 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.8□□□□□ -2.12
DDR1Q08345 AC018630.2-201ENST00000534866 2403 ntBASIC1.8□□□□□ -2.12
DDR1Q08345 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
DDR1Q08345 RNU6-508P-201ENST00000363231 103 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 RNU6-414P-201ENST00000363705 104 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 RNU6-674P-201ENST00000363831 107 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 RNU6-728P-201ENST00000365375 104 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 Y_RNA.393-201ENST00000383936 102 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 SNORA72-201ENST00000384339 132 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 RNU6-136P-201ENST00000384663 107 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 MIR520G-201ENST00000385064 90 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 RNU6-360P-201ENST00000390944 104 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 Y_RNA.587-201ENST00000391210 103 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 MIR1304-201ENST00000408243 91 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 AL606517.2-201ENST00000442855 241 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.79□□□□□ -2.12
DDR1Q08345 SNRPGP8-201ENST00000454064 226 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 RPL23AP54-201ENST00000495129 419 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 RNU4-57P-201ENST00000515980 135 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 RNU6-341P-201ENST00000516973 96 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.79□□□□□ -2.12
DDR1Q08345 AC011604.1-201ENST00000545978 196 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 AC084364.2-201ENST00000546924 395 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 POLR3GP1-201ENST00000594073 261 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 AL078603.1-201ENST00000603824 313 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms