Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SNORD28B-201ENST00000390993 75 ntBASIC3.32□□□□□ -1.88
USP46P62068 RN7SKP123-201ENST00000410732 291 ntBASIC3.32□□□□□ -1.88
USP46P62068 RNU2-7P-201ENST00000410794 178 ntBASIC3.32□□□□□ -1.88
USP46P62068 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.32□□□□□ -1.88
USP46P62068 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.32□□□□□ -1.88
USP46P62068 ELOCP29-201ENST00000588193 334 ntBASIC3.32□□□□□ -1.88
USP46P62068 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
USP46P62068 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
USP46P62068 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
USP46P62068 RNU6-979P-201ENST00000383896 107 ntBASIC3.31□□□□□ -1.88
USP46P62068 Y_RNA.437-201ENST00000384113 113 ntBASIC3.31□□□□□ -1.88
USP46P62068 RNY1P4-201ENST00000384595 115 ntBASIC3.31□□□□□ -1.88
USP46P62068 RNU6-913P-201ENST00000390913 95 ntBASIC3.31□□□□□ -1.88
USP46P62068 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.31□□□□□ -1.88
USP46P62068 S100A11P2-201ENST00000467589 312 ntBASIC3.31□□□□□ -1.88
USP46P62068 AC008885.1-201ENST00000514930 301 ntBASIC3.31□□□□□ -1.88
USP46P62068 MIR548AR-201ENST00000582191 57 ntBASIC3.31□□□□□ -1.88
USP46P62068 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.31□□□□□ -1.88
USP46P62068 AL162274.2-201ENST00000614406 332 ntBASIC3.31□□□□□ -1.88
USP46P62068 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP46P62068 AP006437.1-201ENST00000641440 3685 ntBASIC3.31□□□□□ -1.88
USP46P62068 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.3□□□□□ -1.88
USP46P62068 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.3□□□□□ -1.88
USP46P62068 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP46P62068 MIR422A-201ENST00000362286 90 ntBASIC3.3□□□□□ -1.88
USP46P62068 RNU6-219P-201ENST00000364728 107 ntBASIC3.3□□□□□ -1.88
USP46P62068 RNU1-109P-201ENST00000383960 147 ntBASIC3.3□□□□□ -1.88
USP46P62068 RNU6-787P-201ENST00000384032 107 ntBASIC3.3□□□□□ -1.88
USP46P62068 SNORA54-201ENST00000384281 123 ntBASIC3.3□□□□□ -1.88
USP46P62068 U8.15-201ENST00000390947 134 ntBASIC3.3□□□□□ -1.88
USP46P62068 NDUFB4P4-201ENST00000404822 243 ntBASIC3.3□□□□□ -1.88
USP46P62068 RN7SKP220-201ENST00000410611 288 ntBASIC3.3□□□□□ -1.88
USP46P62068 RNA5SP395-201ENST00000516567 118 ntBASIC3.3□□□□□ -1.88
USP46P62068 SCARNA20.6-201ENST00000517251 106 ntBASIC3.3□□□□□ -1.88
USP46P62068 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.3□□□□□ -1.88
USP46P62068 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.3□□□□□ -1.88
USP46P62068 MIR4668-201ENST00000582284 70 ntBASIC3.3□□□□□ -1.88
USP46P62068 AL020996.3-201ENST00000606617 222 ntBASIC3.3□□□□□ -1.88
USP46P62068 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.3□□□□□ -1.88
USP46P62068 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP46P62068 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
USP46P62068 Y_RNA.221-201ENST00000364248 96 ntBASIC3.29□□□□□ -1.88
USP46P62068 Y_RNA.430-201ENST00000384081 110 ntBASIC3.29□□□□□ -1.88
USP46P62068 SNORD123-201ENST00000459473 70 ntBASIC3.29□□□□□ -1.88
USP46P62068 SCARNA13-201ENST00000516672 275 ntBASIC3.29□□□□□ -1.88
USP46P62068 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.29□□□□□ -1.88
USP46P62068 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
USP46P62068 SNORD116-10-201ENST00000363791 102 ntBASIC3.28□□□□□ -1.88
USP46P62068 Y_RNA.313-201ENST00000365095 103 ntBASIC3.28□□□□□ -1.88
USP46P62068 SNORA24-201ENST00000384096 131 ntBASIC3.28□□□□□ -1.88
USP46P62068 SNORD67-201ENST00000390833 111 ntBASIC3.28□□□□□ -1.88
USP46P62068 AC092427.1-202ENST00000430569 476 ntBASIC3.28□□□□□ -1.88
USP46P62068 HMGN1P33-201ENST00000432945 451 ntBASIC3.28□□□□□ -1.88
USP46P62068 RNU7-73P-201ENST00000458743 63 ntBASIC3.28□□□□□ -1.88
USP46P62068 MIR4439-201ENST00000583746 80 ntBASIC3.28□□□□□ -1.88
USP46P62068 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.28□□□□□ -1.88
USP46P62068 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
USP46P62068 Y_RNA.247-201ENST00000364500 92 ntBASIC3.27□□□□□ -1.89
USP46P62068 Y_RNA.620-201ENST00000411009 88 ntBASIC3.27□□□□□ -1.89
USP46P62068 AC090844.1-201ENST00000422019 156 ntBASIC3.27□□□□□ -1.89
USP46P62068 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.27□□□□□ -1.89
USP46P62068 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
USP46P62068 AC093831.2-201ENST00000624393 3427 ntBASIC3.26□□□□□ -1.89
USP46P62068 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.26□□□□□ -1.89
USP46P62068 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
USP46P62068 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.26□□□□□ -1.89
USP46P62068 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
USP46P62068 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
USP46P62068 SNORD58A-201ENST00000383875 65 ntBASIC3.26□□□□□ -1.89
USP46P62068 Y_RNA.611-201ENST00000410682 108 ntBASIC3.26□□□□□ -1.89
USP46P62068 RNU7-26P-201ENST00000458980 63 ntBASIC3.26□□□□□ -1.89
USP46P62068 AC006483.1-201ENST00000487308 313 ntBASIC3.26□□□□□ -1.89
USP46P62068 RNU7-2P-201ENST00000516096 62 ntBASIC3.26□□□□□ -1.89
USP46P62068 RNVU1-2-201ENST00000516326 135 ntBASIC3.26□□□□□ -1.89
USP46P62068 RNU6-86P-201ENST00000606534 107 ntBASIC3.26□□□□□ -1.89
USP46P62068 AC103810.7-201ENST00000607821 91 ntBASIC3.26□□□□□ -1.89
USP46P62068 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.26□□□□□ -1.89
USP46P62068 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
USP46P62068 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP46P62068 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.25□□□□□ -1.89
USP46P62068 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP46P62068 Y_RNA.426-201ENST00000384068 113 ntBASIC3.25□□□□□ -1.89
USP46P62068 SNORA44-201ENST00000384584 132 ntBASIC3.25□□□□□ -1.89
USP46P62068 SNORD15B-201ENST00000384714 146 ntBASIC3.25□□□□□ -1.89
USP46P62068 RNU6-1067P-201ENST00000384752 107 ntBASIC3.25□□□□□ -1.89
USP46P62068 MIR520A-201ENST00000384862 85 ntBASIC3.25□□□□□ -1.89
USP46P62068 RPS12P2-201ENST00000439728 269 ntBASIC3.25□□□□□ -1.89
USP46P62068 RNU7-171P-201ENST00000459581 62 ntBASIC3.25□□□□□ -1.89
USP46P62068 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.25□□□□□ -1.89
USP46P62068 RNU1-143P-201ENST00000516296 146 ntBASIC3.25□□□□□ -1.89
USP46P62068 SCARNA16.3-201ENST00000516595 184 ntBASIC3.25□□□□□ -1.89
USP46P62068 MIR4709-201ENST00000577272 72 ntBASIC3.25□□□□□ -1.89
USP46P62068 MIR4666B-201ENST00000578142 81 ntBASIC3.25□□□□□ -1.89
USP46P62068 U1.23-201ENST00000610293 146 ntBASIC3.25□□□□□ -1.89
USP46P62068 RNU1-68P-201ENST00000615382 146 ntBASIC3.25□□□□□ -1.89
USP46P62068 U1.39-201ENST00000621562 146 ntBASIC3.25□□□□□ -1.89
USP46P62068 SNORD3E-202ENST00000627253 216 ntBASIC3.25□□□□□ -1.89
USP46P62068 MIR622-201ENST00000638396 96 ntBASIC3.25□□□□□ -1.89
USP46P62068 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
USP46P62068 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms