Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 Y_RNA.432-201ENST00000384087 111 ntBASIC1.4□□□□□ -2.19
CLDN2P57739 RNU6-493P-201ENST00000391321 108 ntBASIC1.4□□□□□ -2.19
CLDN2P57739 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.4□□□□□ -2.19
CLDN2P57739 RNU6-847P-201ENST00000411115 108 ntBASIC1.4□□□□□ -2.19
CLDN2P57739 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.4□□□□□ -2.19
CLDN2P57739 RNY3P16-201ENST00000516338 101 ntBASIC1.4□□□□□ -2.19
CLDN2P57739 RNU6-388P-201ENST00000517012 105 ntBASIC1.4□□□□□ -2.19
CLDN2P57739 RNU6-389P-201ENST00000517048 105 ntBASIC1.4□□□□□ -2.19
CLDN2P57739 SNORA74.3-201ENST00000517108 154 ntBASIC1.4□□□□□ -2.19
CLDN2P57739 RNU6-365P-201ENST00000517113 106 ntBASIC1.4□□□□□ -2.19
CLDN2P57739 AL160236.1-201ENST00000556317 195 ntBASIC1.4□□□□□ -2.19
CLDN2P57739 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CLDN2P57739 MIR8070-201ENST00000616510 88 ntBASIC1.4□□□□□ -2.19
CLDN2P57739 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CLDN2P57739 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CLDN2P57739 Y_RNA.226-201ENST00000364337 114 ntBASIC1.39□□□□□ -2.19
CLDN2P57739 RNU6-728P-201ENST00000365375 104 ntBASIC1.39□□□□□ -2.19
CLDN2P57739 RNU6-484P-201ENST00000384016 107 ntBASIC1.39□□□□□ -2.19
CLDN2P57739 Y_RNA.435-201ENST00000384095 112 ntBASIC1.39□□□□□ -2.19
CLDN2P57739 Y_RNA.486-201ENST00000384398 107 ntBASIC1.39□□□□□ -2.19
CLDN2P57739 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CLDN2P57739 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.39□□□□□ -2.19
CLDN2P57739 AC130289.1-201ENST00000577321 73 ntBASIC1.39□□□□□ -2.19
CLDN2P57739 MIR4308-201ENST00000580634 81 ntBASIC1.39□□□□□ -2.19
CLDN2P57739 AC078938.1-201ENST00000620993 318 ntBASIC1.39□□□□□ -2.19
CLDN2P57739 RNU6-923P-201ENST00000364753 107 ntBASIC1.38□□□□□ -2.19
CLDN2P57739 SNORD24-201ENST00000383884 75 ntBASIC1.38□□□□□ -2.19
CLDN2P57739 Y_RNA.571-201ENST00000384753 98 ntBASIC1.38□□□□□ -2.19
CLDN2P57739 SNORA79-201ENST00000408376 140 ntBASIC1.38□□□□□ -2.19
CLDN2P57739 RNU2-70P-201ENST00000410718 179 ntBASIC1.38□□□□□ -2.19
CLDN2P57739 SNRPGP8-201ENST00000454064 226 ntBASIC1.38□□□□□ -2.19
CLDN2P57739 RNU7-43P-201ENST00000516554 64 ntBASIC1.38□□□□□ -2.19
CLDN2P57739 AL353770.2-201ENST00000620024 78 ntBASIC1.38□□□□□ -2.19
CLDN2P57739 AC015726.2-201ENST00000620112 122 ntBASIC1.38□□□□□ -2.19
CLDN2P57739 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CLDN2P57739 U8.1-201ENST00000362843 134 ntBASIC1.37□□□□□ -2.19
CLDN2P57739 SNORD45.3-201ENST00000363836 72 ntBASIC1.37□□□□□ -2.19
CLDN2P57739 Y_RNA.257-201ENST00000364596 102 ntBASIC1.37□□□□□ -2.19
CLDN2P57739 RNU4-70P-201ENST00000384579 139 ntBASIC1.37□□□□□ -2.19
CLDN2P57739 RNU6-578P-201ENST00000390980 103 ntBASIC1.37□□□□□ -2.19
CLDN2P57739 MIR548O-201ENST00000408583 114 ntBASIC1.37□□□□□ -2.19
CLDN2P57739 RNU4-43P-201ENST00000410628 137 ntBASIC1.37□□□□□ -2.19
CLDN2P57739 SNORD123-201ENST00000459473 70 ntBASIC1.37□□□□□ -2.19
CLDN2P57739 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.37□□□□□ -2.19
CLDN2P57739 RNU6-504P-201ENST00000516568 104 ntBASIC1.37□□□□□ -2.19
CLDN2P57739 SNORA18.7-201ENST00000516910 131 ntBASIC1.37□□□□□ -2.19
CLDN2P57739 AC097639.2-201ENST00000603159 172 ntBASIC1.37□□□□□ -2.19
CLDN2P57739 RNU2-4P-201ENST00000606190 192 ntBASIC1.37□□□□□ -2.19
CLDN2P57739 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.36□□□□□ -2.19
CLDN2P57739 RNU6-1020P-201ENST00000363684 107 ntBASIC1.36□□□□□ -2.19
CLDN2P57739 RNU6-200P-201ENST00000364743 107 ntBASIC1.36□□□□□ -2.19
CLDN2P57739 Y_RNA.634-201ENST00000364811 113 ntBASIC1.36□□□□□ -2.19
CLDN2P57739 Y_RNA.622-201ENST00000411091 108 ntBASIC1.36□□□□□ -2.19
CLDN2P57739 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.36□□□□□ -2.19
CLDN2P57739 RPL39P39-201ENST00000455840 151 ntBASIC1.36□□□□□ -2.19
CLDN2P57739 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.36□□□□□ -2.19
CLDN2P57739 Y_RNA.797-201ENST00000515977 94 ntBASIC1.36□□□□□ -2.19
CLDN2P57739 Y_RNA.666-201ENST00000516187 112 ntBASIC1.36□□□□□ -2.19
CLDN2P57739 SNORD111.1-201ENST00000516421 86 ntBASIC1.36□□□□□ -2.19
CLDN2P57739 RNU6-197P-201ENST00000516680 100 ntBASIC1.36□□□□□ -2.19
CLDN2P57739 Y_RNA.700-201ENST00000516806 100 ntBASIC1.36□□□□□ -2.19
CLDN2P57739 RN7SKP88-201ENST00000516847 250 ntBASIC1.36□□□□□ -2.19
CLDN2P57739 AC109810.1-201ENST00000534066 224 ntBASIC1.36□□□□□ -2.19
CLDN2P57739 AC108706.1-201ENST00000611053 297 ntBASIC1.36□□□□□ -2.19
CLDN2P57739 7SK.8-201ENST00000612110 250 ntBASIC1.36□□□□□ -2.19
CLDN2P57739 7SK.11-201ENST00000615477 250 ntBASIC1.36□□□□□ -2.19
CLDN2P57739 7SK.13-201ENST00000622040 250 ntBASIC1.36□□□□□ -2.19
CLDN2P57739 AP000648.3-201ENST00000623539 4507 ntBASIC1.36□□□□□ -2.19
CLDN2P57739 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CLDN2P57739 RNU6-392P-201ENST00000364926 101 ntBASIC1.35□□□□□ -2.19
CLDN2P57739 Y_RNA.297-201ENST00000364950 91 ntBASIC1.35□□□□□ -2.19
CLDN2P57739 SNORA1.2-201ENST00000365189 134 ntBASIC1.35□□□□□ -2.19
CLDN2P57739 RNU6-918P-201ENST00000391219 106 ntBASIC1.35□□□□□ -2.19
CLDN2P57739 MIR1287-201ENST00000408492 90 ntBASIC1.35□□□□□ -2.19
CLDN2P57739 AL138752.1-201ENST00000452964 351 ntBASIC1.35□□□□□ -2.19
CLDN2P57739 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
CLDN2P57739 RNU7-25P-201ENST00000516544 62 ntBASIC1.35□□□□□ -2.19
CLDN2P57739 AP001485.1-201ENST00000604799 199 ntBASIC1.35□□□□□ -2.19
CLDN2P57739 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.35□□□□□ -2.19
CLDN2P57739 Y_RNA.75-201ENST00000362927 97 ntBASIC1.34□□□□□ -2.19
CLDN2P57739 RNU6-888P-201ENST00000363010 101 ntBASIC1.34□□□□□ -2.19
CLDN2P57739 Y_RNA.274-201ENST00000364714 101 ntBASIC1.34□□□□□ -2.19
CLDN2P57739 Y_RNA.547-201ENST00000384654 119 ntBASIC1.34□□□□□ -2.19
CLDN2P57739 U8.17-201ENST00000391292 132 ntBASIC1.34□□□□□ -2.19
CLDN2P57739 AL121914.1-201ENST00000450188 156 ntBASIC1.34□□□□□ -2.19
CLDN2P57739 Y_RNA.644-201ENST00000459006 113 ntBASIC1.34□□□□□ -2.19
CLDN2P57739 RNU4-57P-201ENST00000515980 135 ntBASIC1.34□□□□□ -2.19
CLDN2P57739 RNU6-970P-201ENST00000516312 107 ntBASIC1.34□□□□□ -2.19
CLDN2P57739 Y_RNA.674-201ENST00000516362 113 ntBASIC1.34□□□□□ -2.19
CLDN2P57739 RNU6-165P-201ENST00000517170 99 ntBASIC1.34□□□□□ -2.19
CLDN2P57739 CYP3A52P-201ENST00000563326 91 ntBASIC1.34□□□□□ -2.19
CLDN2P57739 MIR8065-201ENST00000620577 100 ntBASIC1.34□□□□□ -2.19
CLDN2P57739 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CLDN2P57739 Y_RNA.66-201ENST00000362862 102 ntBASIC1.33□□□□□ -2.2
CLDN2P57739 Y_RNA.182-201ENST00000363880 111 ntBASIC1.33□□□□□ -2.2
CLDN2P57739 RNU6-275P-201ENST00000364910 107 ntBASIC1.33□□□□□ -2.2
CLDN2P57739 RNU6-53P-201ENST00000365367 106 ntBASIC1.33□□□□□ -2.2
CLDN2P57739 SNORD61-201ENST00000384252 73 ntBASIC1.33□□□□□ -2.2
CLDN2P57739 RNU6-1067P-201ENST00000384752 107 ntBASIC1.33□□□□□ -2.2
CLDN2P57739 MIR520C-201ENST00000385005 87 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 232.4 ms