Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RPS29P23-201ENST00000458635 123 ntBASIC1.24□□□□□ -2.21
CDH11P55287 SNORA74.3-201ENST00000517108 154 ntBASIC1.24□□□□□ -2.21
CDH11P55287 MIR4662B-201ENST00000579498 81 ntBASIC1.24□□□□□ -2.21
CDH11P55287 AC097639.2-201ENST00000603159 172 ntBASIC1.24□□□□□ -2.21
CDH11P55287 AP000942.4-201ENST00000604811 241 ntBASIC1.24□□□□□ -2.21
CDH11P55287 AL121890.5-201ENST00000620848 304 ntBASIC1.24□□□□□ -2.21
CDH11P55287 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CDH11P55287 MIR411-201ENST00000362239 96 ntBASIC1.23□□□□□ -2.21
CDH11P55287 Y_RNA.66-201ENST00000362862 102 ntBASIC1.23□□□□□ -2.21
CDH11P55287 Y_RNA.199-201ENST00000364014 102 ntBASIC1.23□□□□□ -2.21
CDH11P55287 Y_RNA.200-201ENST00000364018 102 ntBASIC1.23□□□□□ -2.21
CDH11P55287 Y_RNA.327-201ENST00000365201 102 ntBASIC1.23□□□□□ -2.21
CDH11P55287 MIR548A2-201ENST00000384956 97 ntBASIC1.23□□□□□ -2.21
CDH11P55287 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CDH11P55287 RNU6-918P-201ENST00000391219 106 ntBASIC1.23□□□□□ -2.21
CDH11P55287 RNA5SP247-201ENST00000411181 105 ntBASIC1.23□□□□□ -2.21
CDH11P55287 snoU13.25-201ENST00000458945 104 ntBASIC1.23□□□□□ -2.21
CDH11P55287 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.23□□□□□ -2.21
CDH11P55287 RPL30P7-201ENST00000479312 323 ntBASIC1.23□□□□□ -2.21
CDH11P55287 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.23□□□□□ -2.21
CDH11P55287 RNU4-57P-201ENST00000515980 135 ntBASIC1.23□□□□□ -2.21
CDH11P55287 RNU6-561P-201ENST00000516222 102 ntBASIC1.23□□□□□ -2.21
CDH11P55287 RNU6-388P-201ENST00000517012 105 ntBASIC1.23□□□□□ -2.21
CDH11P55287 RNU6-389P-201ENST00000517048 105 ntBASIC1.23□□□□□ -2.21
CDH11P55287 AC007751.1-201ENST00000529260 376 ntBASIC1.23□□□□□ -2.21
CDH11P55287 AC078938.1-201ENST00000620993 318 ntBASIC1.23□□□□□ -2.21
CDH11P55287 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CDH11P55287 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
CDH11P55287 RNU6-103P-201ENST00000363686 107 ntBASIC1.22□□□□□ -2.21
CDH11P55287 Y_RNA.476-201ENST00000384347 108 ntBASIC1.22□□□□□ -2.21
CDH11P55287 RNU6-493P-201ENST00000391321 108 ntBASIC1.22□□□□□ -2.21
CDH11P55287 RNU6-322P-201ENST00000516010 103 ntBASIC1.22□□□□□ -2.21
CDH11P55287 Y_RNA.666-201ENST00000516187 112 ntBASIC1.22□□□□□ -2.21
CDH11P55287 CYP3A52P-201ENST00000563326 91 ntBASIC1.22□□□□□ -2.21
CDH11P55287 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CDH11P55287 Y_RNA.7-201ENST00000362352 102 ntBASIC1.21□□□□□ -2.22
CDH11P55287 Y_RNA.121-201ENST00000363309 113 ntBASIC1.21□□□□□ -2.22
CDH11P55287 SNORD45.3-201ENST00000363836 72 ntBASIC1.21□□□□□ -2.22
CDH11P55287 Y_RNA.274-201ENST00000364714 101 ntBASIC1.21□□□□□ -2.22
CDH11P55287 RNU6-923P-201ENST00000364753 107 ntBASIC1.21□□□□□ -2.22
CDH11P55287 Y_RNA.634-201ENST00000364811 113 ntBASIC1.21□□□□□ -2.22
CDH11P55287 Y_RNA.435-201ENST00000384095 112 ntBASIC1.21□□□□□ -2.22
CDH11P55287 SNORD38C-201ENST00000384381 69 ntBASIC1.21□□□□□ -2.22
CDH11P55287 RNU4-43P-201ENST00000410628 137 ntBASIC1.21□□□□□ -2.22
CDH11P55287 SNORD123-201ENST00000459473 70 ntBASIC1.21□□□□□ -2.22
CDH11P55287 RNA5SP153-201ENST00000516498 76 ntBASIC1.21□□□□□ -2.22
CDH11P55287 RNU7-25P-201ENST00000516544 62 ntBASIC1.21□□□□□ -2.22
CDH11P55287 MIR4744-201ENST00000581563 82 ntBASIC1.21□□□□□ -2.22
CDH11P55287 AL096861.1-201ENST00000610899 123 ntBASIC1.21□□□□□ -2.22
CDH11P55287 AC108706.1-201ENST00000611053 297 ntBASIC1.21□□□□□ -2.22
CDH11P55287 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CDH11P55287 Y_RNA.83-201ENST00000363005 113 ntBASIC1.2□□□□□ -2.22
CDH11P55287 Y_RNA.91-201ENST00000363042 107 ntBASIC1.2□□□□□ -2.22
CDH11P55287 RNU6-47P-201ENST00000383866 107 ntBASIC1.2□□□□□ -2.22
CDH11P55287 SNORD24-201ENST00000383884 75 ntBASIC1.2□□□□□ -2.22
CDH11P55287 Y_RNA.547-201ENST00000384654 119 ntBASIC1.2□□□□□ -2.22
CDH11P55287 Y_RNA.571-201ENST00000384753 98 ntBASIC1.2□□□□□ -2.22
CDH11P55287 MIR15B-201ENST00000385045 98 ntBASIC1.2□□□□□ -2.22
CDH11P55287 RNU6-578P-201ENST00000390980 103 ntBASIC1.2□□□□□ -2.22
CDH11P55287 Y_RNA.622-201ENST00000411091 108 ntBASIC1.2□□□□□ -2.22
CDH11P55287 RNU6-1054P-201ENST00000411293 104 ntBASIC1.2□□□□□ -2.22
CDH11P55287 RNU6-1299P-201ENST00000516316 100 ntBASIC1.2□□□□□ -2.22
CDH11P55287 RNU6-126P-201ENST00000516685 103 ntBASIC1.2□□□□□ -2.22
CDH11P55287 SNORA18.7-201ENST00000516910 131 ntBASIC1.2□□□□□ -2.22
CDH11P55287 AC068338.1-201ENST00000565567 176 ntBASIC1.2□□□□□ -2.22
CDH11P55287 MIR548AR-201ENST00000582191 57 ntBASIC1.2□□□□□ -2.22
CDH11P55287 MIR3192-201ENST00000584920 77 ntBASIC1.2□□□□□ -2.22
CDH11P55287 AL357312.1-201ENST00000603879 298 ntBASIC1.2□□□□□ -2.22
CDH11P55287 RNU2-4P-201ENST00000606190 192 ntBASIC1.2□□□□□ -2.22
CDH11P55287 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
CDH11P55287 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.2□□□□□ -2.22
CDH11P55287 RNU6-888P-201ENST00000363010 101 ntBASIC1.19□□□□□ -2.22
CDH11P55287 SNORD61-201ENST00000384252 73 ntBASIC1.19□□□□□ -2.22
CDH11P55287 MIR518F-201ENST00000384973 87 ntBASIC1.19□□□□□ -2.22
CDH11P55287 MIR802-201ENST00000390235 94 ntBASIC1.19□□□□□ -2.22
CDH11P55287 SNORD28B-201ENST00000390993 75 ntBASIC1.19□□□□□ -2.22
CDH11P55287 MIR548O-201ENST00000408583 114 ntBASIC1.19□□□□□ -2.22
CDH11P55287 RNU6-197P-201ENST00000516680 100 ntBASIC1.19□□□□□ -2.22
CDH11P55287 AC109810.1-201ENST00000534066 224 ntBASIC1.19□□□□□ -2.22
CDH11P55287 Z83818.1-201ENST00000603584 150 ntBASIC1.19□□□□□ -2.22
CDH11P55287 MIR6078-201ENST00000611069 100 ntBASIC1.19□□□□□ -2.22
CDH11P55287 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CDH11P55287 Y_RNA.432-201ENST00000384087 111 ntBASIC1.18□□□□□ -2.22
CDH11P55287 SNORD26-201ENST00000384147 75 ntBASIC1.18□□□□□ -2.22
CDH11P55287 Y_RNA.552-201ENST00000384665 112 ntBASIC1.18□□□□□ -2.22
CDH11P55287 U8.17-201ENST00000391292 132 ntBASIC1.18□□□□□ -2.22
CDH11P55287 RNU6-938P-201ENST00000411285 103 ntBASIC1.18□□□□□ -2.22
CDH11P55287 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.18□□□□□ -2.22
CDH11P55287 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.18□□□□□ -2.22
CDH11P55287 RNU2-13P-201ENST00000515909 113 ntBASIC1.18□□□□□ -2.22
CDH11P55287 RNU7-43P-201ENST00000516554 64 ntBASIC1.18□□□□□ -2.22
CDH11P55287 RNU6-365P-201ENST00000517113 106 ntBASIC1.18□□□□□ -2.22
CDH11P55287 AP003716.2-201ENST00000528260 108 ntBASIC1.18□□□□□ -2.22
CDH11P55287 MIR4764-201ENST00000580680 88 ntBASIC1.18□□□□□ -2.22
CDH11P55287 AC015726.2-201ENST00000620112 122 ntBASIC1.18□□□□□ -2.22
CDH11P55287 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.18□□□□□ -2.22
CDH11P55287 MIR26B-201ENST00000362251 77 ntBASIC1.17□□□□□ -2.22
CDH11P55287 Y_RNA.75-201ENST00000362927 97 ntBASIC1.17□□□□□ -2.22
CDH11P55287 Y_RNA.257-201ENST00000364596 102 ntBASIC1.17□□□□□ -2.22
CDH11P55287 RNU6-392P-201ENST00000364926 101 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms