Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 Y_RNA.353-201ENST00000365440 108 ntBASIC1.81□□□□□ -2.12
TTC3P53804 SNORD116-14-201ENST00000383894 92 ntBASIC1.81□□□□□ -2.12
TTC3P53804 SNORD116-17-201ENST00000383929 92 ntBASIC1.81□□□□□ -2.12
TTC3P53804 SNORD116-15-201ENST00000384445 92 ntBASIC1.81□□□□□ -2.12
TTC3P53804 SNORD116-19-201ENST00000384729 92 ntBASIC1.81□□□□□ -2.12
TTC3P53804 SNORD72-201ENST00000390994 80 ntBASIC1.81□□□□□ -2.12
TTC3P53804 RPS26P45-201ENST00000471748 340 ntBASIC1.81□□□□□ -2.12
TTC3P53804 MIR3126-201ENST00000577443 74 ntBASIC1.81□□□□□ -2.12
TTC3P53804 AC022513.1-201ENST00000624512 117 ntBASIC1.81□□□□□ -2.12
TTC3P53804 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.81□□□□□ -2.12
TTC3P53804 SNRPGP14-201ENST00000435400 219 ntBASIC1.8□□□□□ -2.12
TTC3P53804 AP001328.1-201ENST00000528550 176 ntBASIC1.8□□□□□ -2.12
TTC3P53804 SUB1P4-201ENST00000566062 339 ntBASIC1.8□□□□□ -2.12
TTC3P53804 MIR3129-201ENST00000581095 76 ntBASIC1.8□□□□□ -2.12
TTC3P53804 MIR4658-201ENST00000584344 65 ntBASIC1.8□□□□□ -2.12
TTC3P53804 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.8□□□□□ -2.12
TTC3P53804 AC069114.2-201ENST00000604699 304 ntBASIC1.8□□□□□ -2.12
TTC3P53804 MIR6895-201ENST00000613497 78 ntBASIC1.8□□□□□ -2.12
TTC3P53804 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.8□□□□□ -2.12
TTC3P53804 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.8□□□□□ -2.12
TTC3P53804 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.79□□□□□ -2.12
TTC3P53804 SNRPGP10-201ENST00000432323 225 ntBASIC1.79□□□□□ -2.12
TTC3P53804 Y_RNA.666-201ENST00000516187 112 ntBASIC1.79□□□□□ -2.12
TTC3P53804 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TTC3P53804 AL160236.1-201ENST00000556317 195 ntBASIC1.79□□□□□ -2.12
TTC3P53804 AC005786.1-201ENST00000588553 154 ntBASIC1.79□□□□□ -2.12
TTC3P53804 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.79□□□□□ -2.12
TTC3P53804 AC134878.1-201ENST00000619901 243 ntBASIC1.79□□□□□ -2.12
TTC3P53804 AC027279.3-201ENST00000625055 122 ntBASIC1.79□□□□□ -2.12
TTC3P53804 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.79□□□□□ -2.12
TTC3P53804 Y_RNA.52-201ENST00000362760 96 ntBASIC1.79□□□□□ -2.12
TTC3P53804 RNU6-647P-201ENST00000364243 107 ntBASIC1.79□□□□□ -2.12
TTC3P53804 MIR522-201ENST00000385071 87 ntBASIC1.79□□□□□ -2.12
TTC3P53804 AC233266.1-201ENST00000454518 96 ntBASIC1.79□□□□□ -2.12
TTC3P53804 RNU6-313P-201ENST00000516317 112 ntBASIC1.79□□□□□ -2.12
TTC3P53804 AC011603.4-201ENST00000611325 277 ntBASIC1.79□□□□□ -2.12
TTC3P53804 AC242852.1-201ENST00000612151 96 ntBASIC1.79□□□□□ -2.12
TTC3P53804 AC244015.1-201ENST00000622301 99 ntBASIC1.79□□□□□ -2.12
TTC3P53804 RNU6-833P-201ENST00000363486 107 ntBASIC1.78□□□□□ -2.12
TTC3P53804 RNU6-915P-201ENST00000364943 103 ntBASIC1.78□□□□□ -2.12
TTC3P53804 SNORA1-201ENST00000384107 130 ntBASIC1.78□□□□□ -2.12
TTC3P53804 HMGN2P38-201ENST00000423806 265 ntBASIC1.78□□□□□ -2.12
TTC3P53804 MIR6840-201ENST00000611937 71 ntBASIC1.78□□□□□ -2.12
TTC3P53804 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.13
TTC3P53804 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.78□□□□□ -2.13
TTC3P53804 RNU1-104P-201ENST00000517280 175 ntBASIC1.78□□□□□ -2.13
TTC3P53804 MIR5094-201ENST00000578766 85 ntBASIC1.78□□□□□ -2.13
TTC3P53804 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.77□□□□□ -2.13
TTC3P53804 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
TTC3P53804 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TTC3P53804 AL596028.1-201ENST00000326971 197 ntBASIC1.77□□□□□ -2.13
TTC3P53804 SNORD115-28-201ENST00000363931 81 ntBASIC1.77□□□□□ -2.13
TTC3P53804 Y_RNA.265-201ENST00000364677 108 ntBASIC1.77□□□□□ -2.13
TTC3P53804 Y_RNA.346-201ENST00000365385 112 ntBASIC1.77□□□□□ -2.13
TTC3P53804 RNU1-148P-201ENST00000384472 162 ntBASIC1.77□□□□□ -2.13
TTC3P53804 AC078899.2-201ENST00000595282 212 ntBASIC1.77□□□□□ -2.13
TTC3P53804 AC108081.1-201ENST00000604358 221 ntBASIC1.77□□□□□ -2.13
TTC3P53804 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.77□□□□□ -2.13
TTC3P53804 RNU6-235P-201ENST00000362644 107 ntBASIC1.76□□□□□ -2.13
TTC3P53804 SNORD61-201ENST00000384252 73 ntBASIC1.76□□□□□ -2.13
TTC3P53804 RPS26P48-201ENST00000491713 339 ntBASIC1.76□□□□□ -2.13
TTC3P53804 RNU6-659P-201ENST00000516454 104 ntBASIC1.76□□□□□ -2.13
TTC3P53804 RNU6-113P-201ENST00000516653 101 ntBASIC1.76□□□□□ -2.13
TTC3P53804 MIR3618-201ENST00000580330 88 ntBASIC1.76□□□□□ -2.13
TTC3P53804 AL645939.4-201ENST00000604495 135 ntBASIC1.76□□□□□ -2.13
TTC3P53804 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TTC3P53804 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
TTC3P53804 MIR337-201ENST00000362281 93 ntBASIC1.76□□□□□ -2.13
TTC3P53804 Y_RNA.410-201ENST00000383992 113 ntBASIC1.76□□□□□ -2.13
TTC3P53804 RNU7-107P-201ENST00000459121 61 ntBASIC1.76□□□□□ -2.13
TTC3P53804 RNA5SP364-201ENST00000516938 78 ntBASIC1.76□□□□□ -2.13
TTC3P53804 SNORA31.25-201ENST00000517242 134 ntBASIC1.76□□□□□ -2.13
TTC3P53804 AC090142.3-201ENST00000519012 385 ntBASIC1.76□□□□□ -2.13
TTC3P53804 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TTC3P53804 SNORD115-3-201ENST00000363100 82 ntBASIC1.75□□□□□ -2.13
TTC3P53804 SNORA16.1-201ENST00000364597 132 ntBASIC1.75□□□□□ -2.13
TTC3P53804 RNA5SP465-201ENST00000391195 109 ntBASIC1.75□□□□□ -2.13
TTC3P53804 AC015922.2-201ENST00000435593 184 ntBASIC1.75□□□□□ -2.13
TTC3P53804 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
TTC3P53804 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
TTC3P53804 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TTC3P53804 RNU6-349P-201ENST00000362402 107 ntBASIC1.74□□□□□ -2.13
TTC3P53804 Y_RNA.85-201ENST00000363014 111 ntBASIC1.74□□□□□ -2.13
TTC3P53804 SNORA33-201ENST00000363664 130 ntBASIC1.74□□□□□ -2.13
TTC3P53804 RNU6-1164P-201ENST00000364428 107 ntBASIC1.74□□□□□ -2.13
TTC3P53804 SNORA25.9-201ENST00000365087 128 ntBASIC1.74□□□□□ -2.13
TTC3P53804 RNU6-1056P-201ENST00000383996 107 ntBASIC1.74□□□□□ -2.13
TTC3P53804 TRMT112P2-201ENST00000512910 132 ntBASIC1.74□□□□□ -2.13
TTC3P53804 MIR7111-201ENST00000619751 72 ntBASIC1.74□□□□□ -2.13
TTC3P53804 RNU6-978P-201ENST00000364371 103 ntBASIC1.74□□□□□ -2.13
TTC3P53804 Y_RNA.521-201ENST00000384560 114 ntBASIC1.74□□□□□ -2.13
TTC3P53804 RNU6-440P-201ENST00000390882 105 ntBASIC1.74□□□□□ -2.13
TTC3P53804 SNORD53B-201ENST00000577887 78 ntBASIC1.74□□□□□ -2.13
TTC3P53804 MIR4529-201ENST00000578110 78 ntBASIC1.74□□□□□ -2.13
TTC3P53804 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.74□□□□□ -2.13
TTC3P53804 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.74□□□□□ -2.13
TTC3P53804 WWP1P1-201ENST00000466609 2769 ntBASIC1.74□□□□□ -2.13
TTC3P53804 Y_RNA.49-201ENST00000362714 112 ntBASIC1.73□□□□□ -2.13
TTC3P53804 Y_RNA.120-201ENST00000363304 110 ntBASIC1.73□□□□□ -2.13
TTC3P53804 RNU6-392P-201ENST00000364926 101 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms